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Summary Geometry Related PDB entries

MAK

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	O1	doub	1.21Å	1.23Å
C1	O2	sing	1.35Å	1.37Å
C1	C2	sing	1.49Å	1.53Å
O2	HO2	sing	0.97Å	0.95Å
C2	O3	doub	1.21Å	1.23Å
C2	C3	sing	1.49Å	1.53Å
C3	O4	doub	1.21Å	1.23Å
C3	O5	sing	1.35Å	1.37Å
O5	HO5	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C1	O2	123.5°	120.0°
O1	C1	C2	124.1°	120.0°
O2	C1	C2	112.4°	120.1°
C1	O2	HO2	123.5°	120.1°
C1	C2	O3	119.7°	120.0°
C1	C2	C3	120.4°	120.0°
O3	C2	C3	119.9°	120.0°
C2	C3	O4	124.2°	120.0°
C2	C3	O5	112.4°	120.1°
O4	C3	O5	123.4°	120.0°
C3	O5	HO5	112.4°	120.1°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C1	O2	C2	179.8°	180.0°
O1	C1	O2	HO2	180.0°	0.0°
O1	C1	C2	O3	179.9°	180.0°
O1	C1	C2	C3	0.1°	0.0°
O2	C1	C2	O3	0.1°	0.0°
O2	C1	C2	C3	179.9°	180.0°
C2	C1	O2	HO2	0.1°	180.0°
C1	C2	O3	C3	180.0°	180.0°
C1	C2	C3	O4	0.1°	0.0°
C1	C2	C3	O5	179.9°	180.0°
O3	C2	C3	O4	180.0°	180.0°
O3	C2	C3	O5	0.1°	0.0°
C2	C3	O4	O5	179.9°	180.0°
C2	C3	O5	HO5	179.9°	180.0°
O4	C3	O5	HO5	0.1°	0.0°

222415

PDB entries from 2024-07-10

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