M84
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O4B | C4B | doub | 1.22Å | 1.23Å | |
| C4B | CW2 | sing | 1.48Å | 1.52Å | |
| C4B | NB4 | sing | 1.35Å | 1.33Å | |
| CW2 | CW3 | sing | 1.40Å | 1.40Å | Aromatic |
| CW2 | CW7 | doub | 1.40Å | 1.40Å | Aromatic |
| CW3 | CW4 | doub | 1.38Å | 1.40Å | Aromatic |
| CW4 | CW5 | sing | 1.38Å | 1.40Å | Aromatic |
| CW5 | CW6 | doub | 1.38Å | 1.41Å | Aromatic |
| CW6 | CW7 | sing | 1.38Å | 1.41Å | Aromatic |
| NB4 | CB4 | sing | 1.40Å | 1.41Å | |
| CB4 | CB3 | sing | 1.39Å | 1.38Å | Aromatic |
| CB4 | CB5 | doub | 1.39Å | 1.41Å | Aromatic |
| CB3 | CB2 | doub | 1.38Å | 1.39Å | Aromatic |
| CB2 | CB1 | sing | 1.38Å | 1.40Å | Aromatic |
| CB5 | CB6 | sing | 1.38Å | 1.41Å | Aromatic |
| CB6 | CB1 | doub | 1.38Å | 1.40Å | Aromatic |
| CB1 | C3B | sing | 1.51Å | 1.51Å | |
| C3B | C2B | sing | 1.53Å | 1.51Å | |
| C2B | C1B | sing | 1.51Å | 1.52Å | |
| C1B | O1B | doub | 1.21Å | 1.22Å | |
| C1B | OXT | sing | 1.34Å | 1.41Å | |
| NB4 | HB4 | sing | 0.97Å | 1.00Å | |
| CW3 | HW3 | sing | 1.08Å | 1.08Å | |
| CW7 | HW7 | sing | 1.08Å | 1.08Å | |
| CW4 | HW4 | sing | 1.08Å | 1.08Å | |
| CW5 | HW5 | sing | 1.08Å | 1.08Å | |
| CW6 | HW6 | sing | 1.08Å | 1.08Å | |
| CB3 | HB3 | sing | 1.08Å | 1.08Å | |
| CB5 | HB5 | sing | 1.08Å | 1.08Å | |
| CB2 | HB2 | sing | 1.08Å | 1.08Å | |
| CB6 | HB6 | sing | 1.08Å | 1.08Å | |
| C3B | H3B1 | sing | 1.09Å | 1.10Å | |
| C3B | H3B2 | sing | 1.09Å | 1.10Å | |
| C2B | H2B1 | sing | 1.09Å | 1.10Å | |
| C2B | H2B2 | sing | 1.09Å | 1.10Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O4B | C4B | CW2 | 120.2° | 120.0° |
| O4B | C4B | NB4 | 121.4° | 120.0° |
| CW2 | C4B | NB4 | 118.4° | 120.0° |
| C4B | CW2 | CW3 | 120.9° | 120.2° |
| C4B | CW2 | CW7 | 120.4° | 120.2° |
| C4B | NB4 | CB4 | 126.7° | 120.0° |
| C4B | NB4 | HB4 | 116.7° | 119.9° |
| CW3 | CW2 | CW7 | 118.6° | 119.7° |
| CW2 | CW3 | CW4 | 120.6° | 119.8° |
| CW2 | CW3 | HW3 | 119.7° | 120.1° |
| CW2 | CW7 | CW6 | 121.0° | 119.9° |
| CW2 | CW7 | HW7 | 119.5° | 120.0° |
| CW3 | CW4 | CW5 | 120.8° | 120.2° |
| CW4 | CW3 | HW3 | 119.7° | 120.1° |
| CW3 | CW4 | HW4 | 119.6° | 119.9° |
| CW4 | CW5 | CW6 | 119.3° | 120.2° |
| CW5 | CW4 | HW4 | 119.6° | 119.9° |
| CW4 | CW5 | HW5 | 120.4° | 119.9° |
| CW5 | CW6 | CW7 | 119.8° | 120.2° |
| CW6 | CW5 | HW5 | 120.4° | 119.9° |
| CW5 | CW6 | HW6 | 120.1° | 119.9° |
| CW6 | CW7 | HW7 | 119.5° | 120.1° |
| CW7 | CW6 | HW6 | 120.1° | 119.9° |
| NB4 | CB4 | CB3 | 115.7° | 120.1° |
| NB4 | CB4 | CB5 | 125.3° | 120.1° |
| CB4 | NB4 | HB4 | 116.6° | 120.0° |
| CB3 | CB4 | CB5 | 119.0° | 119.8° |
| CB4 | CB3 | CB2 | 119.5° | 120.0° |
| CB4 | CB3 | HB3 | 120.2° | 120.0° |
| CB4 | CB5 | CB6 | 121.3° | 119.9° |
| CB4 | CB5 | HB5 | 119.4° | 120.0° |
| CB3 | CB2 | CB1 | 122.6° | 120.0° |
| CB2 | CB3 | HB3 | 120.3° | 120.0° |
| CB3 | CB2 | HB2 | 118.7° | 120.0° |
| CB2 | CB1 | CB6 | 118.5° | 120.2° |
| CB2 | CB1 | C3B | 115.8° | 119.9° |
| CB1 | CB2 | HB2 | 118.7° | 120.0° |
| CB5 | CB6 | CB1 | 119.1° | 120.1° |
| CB6 | CB5 | HB5 | 119.4° | 120.1° |
| CB5 | CB6 | HB6 | 120.5° | 119.9° |
| CB6 | CB1 | C3B | 125.6° | 119.9° |
| CB1 | CB6 | HB6 | 120.4° | 120.0° |
| CB1 | C3B | C2B | 113.7° | 109.5° |
| CB1 | C3B | H3B1 | 108.1° | 109.5° |
| CB1 | C3B | H3B2 | 107.1° | 109.5° |
| C3B | C2B | C1B | 111.6° | 109.5° |
| C2B | C3B | H3B1 | 108.1° | 109.5° |
| C2B | C3B | H3B2 | 107.1° | 109.4° |
| C3B | C2B | H2B1 | 108.8° | 109.5° |
| C3B | C2B | H2B2 | 108.3° | 109.5° |
| C2B | C1B | O1B | 120.3° | 120.0° |
| C2B | C1B | OXT | 125.6° | 120.0° |
| C1B | C2B | H2B1 | 108.8° | 109.4° |
| C1B | C2B | H2B2 | 108.3° | 109.5° |
| O1B | C1B | OXT | 113.9° | 120.0° |
| C1B | OXT | HXT | 109.5° | 117.0° |
| H3B1 | C3B | H3B2 | 112.9° | 109.4° |
| H2B1 | C2B | H2B2 | 111.1° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O4B | C4B | CW2 | NB4 | 179.1° | 179.8° |
| O4B | C4B | CW2 | CW3 | 0.7° | 0.0° |
| O4B | C4B | CW2 | CW7 | 179.2° | 179.8° |
| O4B | C4B | NB4 | CB4 | 29.1° | 5.3° |
| O4B | C4B | NB4 | HB4 | 150.9° | 174.7° |
| C4B | CW2 | CW3 | CW7 | 179.9° | 179.8° |
| C4B | CW2 | CW3 | CW4 | 179.9° | 179.9° |
| C4B | CW2 | CW7 | CW6 | 180.0° | 179.8° |
| CW2 | C4B | NB4 | CB4 | 151.7° | 174.5° |
| CW2 | C4B | NB4 | HB4 | 28.2° | 5.6° |
| C4B | CW2 | CW3 | HW3 | 0.0° | 0.0° |
| C4B | CW2 | CW7 | HW7 | 0.0° | 0.0° |
| NB4 | C4B | CW2 | CW3 | 179.9° | 179.7° |
| NB4 | C4B | CW2 | CW7 | 0.0° | 0.0° |
| C4B | NB4 | CB4 | HB4 | 180.0° | 179.9° |
| C4B | NB4 | CB4 | CB3 | 148.4° | 146.8° |
| C4B | NB4 | CB4 | CB5 | 33.1° | 33.6° |
| CW2 | CW3 | CW4 | HW3 | 180.0° | 180.0° |
| CW2 | CW3 | CW4 | CW5 | 0.1° | 0.1° |
| CW3 | CW2 | CW7 | CW6 | 0.1° | 0.5° |
| CW3 | CW2 | CW7 | HW7 | 179.9° | 179.7° |
| CW2 | CW3 | CW4 | HW4 | 179.9° | 180.0° |
| CW7 | CW2 | CW3 | CW4 | 0.1° | 0.2° |
| CW2 | CW7 | CW6 | CW5 | 0.0° | 0.5° |
| CW2 | CW7 | CW6 | HW7 | 180.0° | 179.8° |
| CW7 | CW2 | CW3 | HW3 | 179.9° | 179.8° |
| CW2 | CW7 | CW6 | HW6 | 180.0° | 179.7° |
| CW3 | CW4 | CW5 | HW4 | 180.0° | 179.9° |
| CW3 | CW4 | CW5 | CW6 | 0.0° | 0.1° |
| CW3 | CW4 | CW5 | HW5 | 180.0° | 180.0° |
| CW4 | CW5 | CW6 | HW5 | 180.0° | 180.0° |
| CW4 | CW5 | CW6 | CW7 | 0.0° | 0.2° |
| CW5 | CW4 | CW3 | HW3 | 179.9° | 179.9° |
| CW4 | CW5 | CW6 | HW6 | 180.0° | 179.9° |
| CW5 | CW6 | CW7 | HW6 | 180.0° | 179.9° |
| CW5 | CW6 | CW7 | HW7 | 180.0° | 179.7° |
| CW6 | CW5 | CW4 | HW4 | 180.0° | 179.9° |
| CW7 | CW6 | CW5 | HW5 | 180.0° | 179.8° |
| NB4 | CB4 | CB3 | CB5 | 178.6° | 179.6° |
| NB4 | CB4 | CB3 | CB2 | 179.6° | 180.0° |
| NB4 | CB4 | CB5 | CB6 | 179.4° | 180.0° |
| NB4 | CB4 | CB3 | HB3 | 0.4° | 0.1° |
| NB4 | CB4 | CB5 | HB5 | 0.7° | 0.0° |
| CB4 | CB3 | CB2 | HB3 | 180.0° | 179.9° |
| CB4 | CB3 | CB2 | CB1 | 0.8° | 0.1° |
| CB3 | CB4 | CB5 | CB6 | 1.0° | 0.4° |
| CB3 | CB4 | NB4 | HB4 | 31.6° | 33.1° |
| CB3 | CB4 | CB5 | HB5 | 179.1° | 179.7° |
| CB4 | CB3 | CB2 | HB2 | 179.2° | 180.0° |
| CB5 | CB4 | CB3 | CB2 | 1.1° | 0.4° |
| CB4 | CB5 | CB6 | HB5 | 180.0° | 180.0° |
| CB4 | CB5 | CB6 | CB1 | 0.6° | 0.1° |
| CB5 | CB4 | NB4 | HB4 | 146.8° | 146.5° |
| CB5 | CB4 | CB3 | HB3 | 179.0° | 179.8° |
| CB4 | CB5 | CB6 | HB6 | 179.5° | 180.0° |
| CB3 | CB2 | CB1 | HB2 | 180.0° | 179.9° |
| CB3 | CB2 | CB1 | CB6 | 0.4° | 0.2° |
| CB3 | CB2 | CB1 | C3B | 179.8° | 180.0° |
| CB2 | CB1 | CB6 | CB5 | 0.3° | 0.2° |
| CB2 | CB1 | CB6 | C3B | 179.8° | 179.8° |
| CB2 | CB1 | C3B | C2B | 164.4° | 90.0° |
| CB1 | CB2 | CB3 | HB3 | 179.2° | 180.0° |
| CB2 | CB1 | CB6 | HB6 | 179.7° | 179.7° |
| CB2 | CB1 | C3B | H3B1 | 75.6° | 149.9° |
| CB2 | CB1 | C3B | H3B2 | 46.3° | 30.0° |
| CB5 | CB6 | CB1 | HB6 | 180.0° | 180.0° |
| CB5 | CB6 | CB1 | C3B | 180.0° | 180.0° |
| CB6 | CB1 | C3B | C2B | 15.9° | 89.8° |
| CB1 | CB6 | CB5 | HB5 | 179.5° | 180.0° |
| CB6 | CB1 | CB2 | HB2 | 179.6° | 179.7° |
| CB6 | CB1 | C3B | H3B1 | 104.2° | 30.3° |
| CB6 | CB1 | C3B | H3B2 | 134.0° | 150.2° |
| CB1 | C3B | C2B | H3B1 | 120.0° | 120.1° |
| CB1 | C3B | C2B | H3B2 | 118.1° | 120.0° |
| CB1 | C3B | C2B | C1B | 145.7° | NaN° |
| C3B | CB1 | CB2 | HB2 | 0.2° | 0.0° |
| C3B | CB1 | CB6 | HB6 | 0.0° | 0.0° |
| CB1 | C3B | H3B1 | H3B2 | 118.2° | 120.0° |
| CB1 | C3B | C2B | H2B1 | 94.3° | 60.0° |
| CB1 | C3B | C2B | H2B2 | 26.6° | 60.0° |
| C3B | C2B | C1B | H2B1 | 120.0° | 120.1° |
| C3B | C2B | C1B | H2B2 | 119.1° | 120.0° |
| C3B | C2B | C1B | O1B | 176.8° | 0.0° |
| C3B | C2B | C1B | OXT | 2.2° | 179.9° |
| C2B | C3B | H3B1 | H3B2 | 118.3° | 119.9° |
| C3B | C2B | H2B1 | H2B2 | 119.1° | 120.0° |
| C2B | C1B | O1B | OXT | 175.2° | 179.9° |
| C1B | C2B | C3B | H3B1 | 25.7° | 59.9° |
| C1B | C2B | C3B | H3B2 | 96.2° | 60.0° |
| C1B | C2B | H2B1 | H2B2 | 119.1° | 119.9° |
| C2B | C1B | OXT | HXT | 174.9° | 179.9° |
| O1B | C1B | C2B | H2B1 | 63.2° | 120.1° |
| O1B | C1B | C2B | H2B2 | 57.6° | 120.0° |
| O1B | C1B | OXT | HXT | 0.0° | 0.1° |
| OXT | C1B | C2B | H2B1 | 122.2° | 60.0° |
| OXT | C1B | C2B | H2B2 | 116.9° | 59.9° |
| HW3 | CW3 | CW4 | HW4 | 0.1° | 0.1° |
| HW7 | CW7 | CW6 | HW6 | 0.0° | 0.1° |
| HW4 | CW4 | CW5 | HW5 | 0.0° | 0.1° |
| HW5 | CW5 | CW6 | HW6 | 0.0° | 0.1° |
| HB3 | CB3 | CB2 | HB2 | 0.8° | 0.1° |
| HB5 | CB5 | CB6 | HB6 | 0.5° | 0.0° |
| H3B1 | C3B | C2B | H2B1 | 145.7° | 179.9° |
| H3B1 | C3B | C2B | H2B2 | 93.4° | 60.1° |
| H3B2 | C3B | C2B | H2B1 | 23.8° | 60.1° |
| H3B2 | C3B | C2B | H2B2 | 144.7° | 180.0° |






