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SummaryGeometryRelated PDB entries

M6W

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C04C05sing1.54Å1.67Å
C04C08sing1.55Å1.32Å
C04C03sing1.51Å1.55Å
N06C07sing1.48Å1.58Å
N06C05sing1.47Å1.33Å
C07C08sing1.55Å1.59Å
N02C03sing1.35Å1.44Å
N02C01sing1.47Å1.44Å
C03O09doub1.21Å1.19Å
C01H1sing1.09Å1.10Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
C04H4sing1.09Å1.10Å
C05H5sing1.09Å1.10Å
C05H6sing1.09Å1.10Å
C07H7sing1.09Å1.10Å
C07H8sing1.09Å1.10Å
C08H9sing1.09Å1.10Å
C08H10sing1.09Å1.10Å
N02H11sing0.97Å1.00Å
N06H12sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C05C04C08105.4°103.0°
C05C04C03108.9°110.7°
C04C05N06107.0°107.2°
C05C04H4108.5°110.7°
C04C05H5110.1°109.9°
C04C05H6110.1°109.9°
C08C04C03110.0°110.7°
C04C08C07103.7°101.7°
C08C04H4113.8°110.6°
C04C08H9110.9°111.0°
C04C08H10110.9°111.0°
C04C03N02119.1°120.0°
C04C03O09121.2°120.0°
C03C04H4110.1°110.8°
C07N06C05106.6°108.6°
N06C07C08104.8°104.8°
N06C07H7110.6°110.4°
N06C07H8110.7°110.5°
C07N06H12110.2°111.0°
N06C05H5110.1°109.9°
N06C05H6110.1°110.0°
C05N06H12110.2°111.0°
C08C07H7110.6°110.3°
C08C07H8110.6°110.4°
C07C08H9110.9°111.0°
C07C08H10110.9°110.9°
C03N02C01117.6°120.0°
N02C03O09119.7°120.0°
C03N02H11121.2°120.0°
N02C01H1109.5°109.4°
N02C01H2109.5°109.4°
N02C01H3109.4°109.4°
C01N02H11121.2°120.0°
H1C01H2109.5°109.5°
H1C01H3109.5°109.5°
H2C01H3109.5°109.5°
H5C05H6109.5°109.9°
H7C07H8109.5°110.3°
H9C08H10109.5°110.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C05C04C08C03117.2°118.4°
C05C04C08H4118.8°118.4°
C05C04C03H4118.8°123.2°
C04C05N06C0712.3°1.0°
C04C05N06H5119.6°119.4°
C04C05N06H6119.6°119.5°
C05C04C08C0734.6°35.6°
C05C04C03N02146.1°61.4°
C05C04C03O0933.5°118.6°
C04C05H5H6121.1°121.0°
C05C04C08H9153.7°153.7°
C05C04C08H1084.5°82.4°
C04C05N06H12107.2°123.2°
C08C04C03H4126.2°123.2°
C04C08C07N0628.3°37.0°
C08C04C05N0632.6°22.2°
C04C08C07H9119.1°118.2°
C04C08C07H10119.1°118.1°
C08C04C03N0298.9°175.1°
C08C04C03O0981.5°4.9°
C08C04C05H587.0°97.1°
C08C04C05H6152.2°141.8°
C04C08C07H7147.6°81.8°
C04C08C07H890.9°156.0°
C04C08H9H10122.7°123.9°
C03C04C05N06150.5°140.7°
C03C04C08C07151.8°154.0°
C04C03N02O09179.7°180.0°
C04C03N02C01179.8°180.0°
C03C04C05H530.9°21.3°
C03C04C05H689.8°99.7°
C03C04C08H989.1°87.9°
C03C04C08H1032.7°36.0°
C04C03N02H110.2°0.1°
C07N06C05H12119.6°122.2°
N06C07C08H7119.3°118.8°
N06C07C08H8119.3°119.0°
C07N06C05H5107.3°120.4°
C07N06C05H6131.9°118.5°
N06C07H7H8122.2°122.4°
N06C07C08H9147.4°155.2°
N06C07C08H1090.8°81.1°
C05N06C07C087.1°24.0°
N06C05C04H489.6°96.1°
N06C05H5H6121.1°121.2°
C05N06C07H7126.3°94.7°
C05N06C07H8112.2°143.0°
C07C08C04H484.2°82.8°
C08C07H7H8122.2°122.2°
C07C08H9H10122.7°123.8°
C08C07N06H12126.6°146.3°
C03N02C01H11180.0°179.9°
C03N02C01H1180.0°60.0°
C03N02C01H260.0°60.0°
C03N02C01H360.0°180.0°
N02C03C04H427.3°61.8°
C01N02C03O090.1°0.0°
N02C01H1H2120.0°120.0°
N02C01H1H3120.0°119.9°
N02C01H2H3120.0°120.0°
O09C03C04H4152.4°118.2°
O09C03N02H11179.9°179.9°
H1C01H2H3120.0°120.1°
H1C01N02H110.0°119.9°
H2C01N02H11120.0°120.1°
H3C01N02H11120.0°0.1°
H4C04C05H5150.7°144.5°
H4C04C05H630.0°23.5°
H4C04C08H934.9°35.4°
H4C04C08H10156.8°159.2°
H5C05N06H12133.1°117.4°
H6C05N06H1212.4°3.7°
H7C07C08H993.3°36.3°
H7C07C08H1028.5°160.1°
H7C07N06H12114.2°27.5°
H8C07C08H928.1°85.8°
H8C07C08H10150.0°38.0°
H8C07N06H127.3°94.8°

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PDB entries from 2024-07-17

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