Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

M65

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C3doub1.35Å1.34ÅAromatic
C2N1sing1.34Å1.38ÅAromatic
C3N2sing1.37Å1.38ÅAromatic
N1C1doub1.31Å1.31ÅAromatic
N2C1sing1.35Å1.34ÅAromatic
N2C4sing1.46Å1.45Å
C4C5sing1.53Å1.52Å
C5C6sing1.53Å1.50Å
C6C7sing1.53Å1.52Å
C12C11sing1.53Å1.49Å
C7C8sing1.53Å1.52Å
C8C9sing1.53Å1.50Å
C11O2sing1.45Å1.47Å
O2C10sing1.34Å1.33Å
C10C9sing1.51Å1.51Å
C10O1doub1.21Å1.19Å
C11H1sing1.09Å1.10Å
C11H2sing1.09Å1.10Å
C9H3sing1.09Å1.10Å
C9H4sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C2H9sing1.08Å1.08Å
C6H10sing1.09Å1.10Å
C6H11sing1.09Å1.10Å
C5H12sing1.09Å1.10Å
C5H13sing1.09Å1.10Å
C3H14sing1.08Å1.08Å
C4H15sing1.09Å1.10Å
C4H16sing1.09Å1.10Å
C1H17sing1.08Å1.08Å
C12H18sing1.09Å1.10Å
C12H19sing1.09Å1.10Å
C12H20sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C2N1110.2°108.1°
C2C3N2105.9°106.8°
C3C2H9124.9°126.0°
C2C3H14127.1°126.6°
C2N1C1105.4°109.2°
N1C2H9124.9°126.0°
C3N2C1107.1°107.2°
C3N2C4126.0°126.4°
N2C3H14127.1°126.6°
N1C1N2111.4°108.7°
N1C1H17124.3°125.6°
C1N2C4126.9°126.4°
N2C1H17124.3°125.7°
N2C4C5110.2°109.5°
N2C4H15109.3°109.5°
N2C4H16109.3°109.5°
C4C5C6114.4°109.5°
C4C5H12108.2°109.5°
C4C5H13108.2°109.5°
C5C4H15109.3°109.4°
C5C4H16109.3°109.5°
C5C6C7114.4°109.5°
C5C6H10108.2°109.5°
C5C6H11108.2°109.5°
C6C5H12108.2°109.5°
C6C5H13108.2°109.4°
C6C7C8112.2°109.5°
C6C7H7108.8°109.5°
C6C7H8108.8°109.4°
C7C6H10108.2°109.5°
C7C6H11108.2°109.4°
C12C11O2111.3°109.5°
C12C11H1109.0°109.5°
C12C11H2109.0°109.5°
C11C12H18109.5°109.5°
C11C12H19109.5°109.4°
C11C12H20109.5°109.5°
C7C8C9113.6°109.5°
C7C8H5108.4°109.5°
C7C8H6108.4°109.5°
C8C7H7108.8°109.5°
C8C7H8108.8°109.5°
C8C9C10113.5°109.5°
C8C9H3108.5°109.4°
C8C9H4108.5°109.5°
C9C8H5108.4°109.5°
C9C8H6108.4°109.5°
C11O2C10115.4°117.0°
O2C11H1109.1°109.4°
O2C11H2109.0°109.5°
O2C10C9112.7°120.0°
O2C10O1122.2°120.0°
C9C10O1125.1°120.0°
C10C9H3108.5°109.5°
C10C9H4108.4°109.5°
H1C11H2109.5°109.5°
H3C9H4109.5°109.5°
H5C8H6109.5°109.5°
H7C7H8109.5°109.5°
H10C6H11109.5°109.5°
H12C5H13109.4°109.5°
H15C4H16109.5°109.5°
H18C12H19109.5°109.4°
H18C12H20109.5°109.5°
H19C12H20109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C2N1H9180.0°179.8°
C2C3N2H14180.0°179.9°
C3C2N1C11.8°0.0°
C2C3N2C10.2°0.0°
C2C3N2C4179.7°180.0°
N1C2C3N21.0°0.0°
C2N1C1N21.9°0.0°
N1C2C3H14179.0°179.9°
C2N1C1H17178.1°180.0°
C3N2C1N11.3°0.0°
C3N2C1C4179.5°180.0°
C3N2C4C5107.1°90.0°
N2C3C2H9179.0°179.8°
C3N2C4H15132.8°30.0°
C3N2C4H1613.0°150.0°
C3N2C1H17178.7°180.0°
N1C1N2H17180.0°180.0°
N1C1N2C4179.1°180.0°
C1N1C2H9178.2°179.8°
C1N2C4C573.4°90.0°
C1N2C3H14179.8°180.0°
C1N2C4H1546.7°150.0°
C1N2C4H16166.5°30.0°
N2C4C5H15120.1°120.0°
N2C4C5H16120.1°120.0°
N2C4C5C668.4°180.0°
N2C4C5H1252.3°60.0°
N2C4C5H13170.8°60.0°
C4N2C3H140.3°0.0°
N2C4H15H16119.7°120.0°
C4N2C1H170.8°0.0°
C4C5C6H12120.8°120.0°
C4C5C6H13120.8°120.0°
C4C5C6C7161.3°180.0°
C4C5C6H1040.6°60.0°
C4C5C6H1178.0°60.0°
C4C5H12H13117.7°120.1°
C5C4H15H16119.7°120.0°
C5C6C7H10120.7°120.0°
C5C6C7H11120.7°120.0°
C5C6C7C8178.9°180.0°
C5C6C7H760.7°60.0°
C5C6C7H858.5°60.0°
C5C6H10H11117.8°120.0°
C6C5H12H13117.7°119.9°
C6C5C4H15171.5°60.0°
C6C5C4H1651.6°60.0°
C6C7C8H7120.4°120.1°
C6C7C8H8120.4°119.9°
C6C7C8C9172.6°180.0°
C6C7C8H551.9°60.0°
C6C7C8H666.8°60.1°
C6C7H7H8118.8°120.0°
C7C6H10H11117.7°120.0°
C7C6C5H1278.0°60.0°
C7C6C5H1340.5°60.0°
C12C11O2H1120.3°120.0°
C12C11O2H2120.2°120.0°
C12C11O2C1079.0°179.9°
C12C11H1H2119.2°120.0°
C11C12H18H19120.0°120.0°
C11C12H18H20120.0°120.0°
C11C12H19H20120.0°120.0°
C7C8C9H5120.6°120.0°
C7C8C9H6120.6°120.0°
C7C8C9C1049.9°180.0°
C7C8C9H3170.5°60.0°
C7C8C9H470.7°60.0°
C7C8H5H6118.1°120.0°
C8C7H7H8118.7°120.0°
C8C7C6H1058.2°60.0°
C8C7C6H1160.4°60.0°
C8C9C10O264.8°179.9°
C8C9C10H3120.6°120.0°
C8C9C10H4120.6°120.0°
C8C9C10O1115.8°0.0°
C8C9H3H4118.2°120.0°
C9C8H5H6118.1°120.0°
C9C8C7H767.1°60.0°
C9C8C7H852.1°60.0°
C11O2C10C9178.8°180.0°
C11O2C10O11.7°0.1°
O2C11H1H2119.2°120.0°
O2C11C12H18180.0°60.0°
O2C11C12H1960.0°60.0°
O2C11C12H2060.0°180.0°
O2C10C9O1179.5°179.9°
C10O2C11H141.3°60.0°
C10O2C11H2160.8°60.0°
O2C10C9H355.8°60.0°
O2C10C9H4174.6°60.1°
C10C9H3H4118.2°120.0°
C10C9C8H570.7°60.0°
C10C9C8H6170.5°60.0°
O1C10C9H3123.7°119.9°
O1C10C9H44.8°120.0°
H1C11C12H1859.7°60.0°
H1C11C12H1960.3°179.9°
H1C11C12H20179.7°60.1°
H2C11C12H1859.7°180.0°
H2C11C12H19179.8°60.1°
H2C11C12H2060.3°60.0°
H3C9C8H549.9°180.0°
H3C9C8H668.9°60.0°
H4C9C8H5168.7°60.0°
H4C9C8H649.9°NaN°
H5C8C7H7172.3°180.0°
H5C8C7H868.5°60.0°
H6C8C7H753.6°60.0°
H6C8C7H8172.7°180.0°
H7C7C6H10178.6°180.0°
H7C7C6H1160.1°60.0°
H8C7C6H1062.2°60.0°
H8C7C6H11179.2°180.0°
H9C2C3H141.0°0.2°
H10C6C5H12161.3°180.0°
H10C6C5H1380.2°60.0°
H11C6C5H1242.8°60.0°
H11C6C5H13161.2°180.0°
H12C5C4H1567.8°180.0°
H12C5C4H16172.4°60.0°
H13C5C4H1550.7°60.0°
H13C5C4H1669.1°180.0°
H18C12H19H20120.0°120.0°

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon