Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

M4E

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N06N05sing1.28Å1.33ÅAromatic
N06C07sing1.37Å1.34ÅAromatic
N05C04doub1.32Å1.30ÅAromatic
N02C01sing1.47Å1.45Å
N02C03sing1.35Å1.45Å
C07C12sing1.39Å1.41ÅAromatic
C07C08doub1.41Å1.39ÅAromatic
C04C03sing1.47Å1.52Å
C04C08sing1.47Å1.45ÅAromatic
C03O13doub1.22Å1.18Å
C12C11doub1.37Å1.40ÅAromatic
C08C09sing1.39Å1.41ÅAromatic
C11C10sing1.39Å1.41ÅAromatic
C09C10doub1.37Å1.40ÅAromatic
C10H1sing1.08Å1.08Å
C01H2sing1.09Å1.10Å
C01H3sing1.09Å1.10Å
C01H4sing1.09Å1.10Å
C09H5sing1.08Å1.08Å
C11H6sing1.08Å1.08Å
C12H7sing1.08Å1.08Å
N02H8sing0.97Å1.00Å
N06H9sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N05N06C07111.1°111.3°
N06N05C04110.3°112.0°
N05N06H9124.4°124.3°
N06C07C12133.1°134.7°
N06C07C08106.3°106.1°
C07N06H9124.4°124.4°
N05C04C03124.9°126.8°
N05C04C08106.8°106.3°
C01N02C03120.5°119.9°
N02C01H2109.5°109.4°
N02C01H3109.4°109.5°
N02C01H4109.5°109.5°
C01N02H8119.7°120.0°
N02C03C04118.4°120.0°
N02C03O13121.6°120.0°
C03N02H8119.8°120.0°
C12C07C08120.6°119.2°
C07C12C11119.5°119.8°
C07C12H7120.3°120.1°
C07C08C04105.5°104.4°
C07C08C09119.8°120.1°
C03C04C08128.3°126.8°
C04C03O13120.0°120.0°
C04C08C09134.7°135.5°
C12C11C10119.9°120.9°
C12C11H6120.1°119.5°
C11C12H7120.3°120.1°
C08C09C10119.8°119.5°
C08C09H5120.1°120.2°
C11C10C09120.4°120.5°
C11C10H1119.8°119.7°
C10C11H6120.0°119.6°
C09C10H1119.8°119.8°
C10C09H5120.1°120.2°
H2C01H3109.5°109.5°
H2C01H4109.5°109.5°
H3C01H4109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N05N06C07H9180.0°179.9°
N05N06C07C12179.6°180.0°
N05N06C07C080.1°0.2°
N06N05C04C03179.5°179.9°
N06N05C04C080.2°0.0°
C07N06N05C040.2°0.2°
N06C07C12C08179.8°179.8°
N06C07C08C040.0°0.2°
N06C07C12C11179.9°180.0°
N06C07C08C09179.9°179.9°
N06C07C12H70.1°0.2°
N05C04C03N0223.5°0.0°
N05C04C08C070.1°0.1°
N05C04C03C08179.6°180.0°
N05C04C03O13155.4°179.9°
N05C04C08C09180.0°179.8°
C04N05N06H9179.8°180.0°
C01N02C03H8180.0°180.0°
C01N02C03C04179.7°180.0°
C01N02C03O130.7°0.0°
N02C01H2H3120.0°120.0°
N02C01H2H4120.0°120.0°
N02C01H3H4120.0°120.1°
N02C03C04O13179.0°179.9°
N02C03C04C08156.9°180.0°
C03N02C01H2180.0°180.0°
C03N02C01H360.0°60.0°
C03N02C01H460.0°60.0°
C12C07C08C04179.8°180.0°
C07C12C11H7180.0°179.8°
C12C07C08C090.3°0.2°
C07C12C11C100.4°0.0°
C07C12C11H6179.5°179.9°
C12C07N06H90.3°0.1°
C07C08C04C03179.5°180.0°
C07C08C04C09179.9°179.7°
C08C07C12C110.3°0.2°
C07C08C09C100.3°0.0°
C07C08C09H5179.7°180.0°
C08C07C12H7179.7°180.0°
C08C07N06H9179.9°179.9°
C03C04C08C090.4°0.3°
C04C03N02H80.4°0.0°
C08C04C03O1324.1°0.1°
C04C08C09C10179.7°179.7°
C04C08C09H50.3°0.3°
O13C03N02H8179.3°180.0°
C12C11C10H6180.0°180.0°
C12C11C10C090.5°0.2°
C12C11C10H1179.5°180.0°
C08C09C10C110.5°0.2°
C08C09C10H5180.0°180.0°
C08C09C10H1179.5°180.0°
C11C10C09H1180.0°179.8°
C11C10C09H5179.5°179.8°
C10C11C12H7179.5°179.8°
C09C10C11H6179.5°179.7°
H1C10C09H50.4°0.0°
H1C10C11H60.5°0.0°
H2C01H3H4120.0°120.0°
H2C01N02H80.0°0.0°
H3C01N02H8120.0°120.0°
H4C01N02H8120.0°120.0°
H6C11C12H70.5°0.2°

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon