Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

M2P

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.53Å
C1O1sing1.43Å1.43Å
C1H11Asing1.09Å1.11Å
C1H12sing1.09Å1.11Å
C5C6sing1.53Å1.53Å
C5C4sing1.53Å1.53Å
C5O5sing1.43Å1.43Å
C5H5sing1.09Å1.11Å
C6O6sing1.43Å1.43Å
C6H61sing1.09Å1.11Å
C6H62Asing1.09Å1.12Å
C4C3sing1.53Å1.53Å
C4O4sing1.43Å1.43Å
C4H4sing1.09Å1.11Å
C3C2sing1.53Å1.53Å
C3O3sing1.43Å1.43Å
C3H3sing1.09Å1.12Å
C2O2sing1.43Å1.43Å
C2H2sing1.09Å1.11Å
O12P1doub1.48Å1.61Å
P1O13sing1.61Å1.61Å
P1O11sing1.61Å1.48Å
P1O1sing1.61Å1.61Å
O13H13sing0.97Å0.95Å
O11H11sing0.97Å0.95Å
O2HO2sing0.97Å0.95Å
O3HO3sing0.97Å0.95Å
O4HO4sing0.97Å0.95Å
O5HO5sing0.97Å0.95Å
O6P6sing1.61Å1.61Å
P6O62sing1.61Å1.61Å
P6O63sing1.61Å1.61Å
P6O61doub1.48Å1.48Å
O62H62sing0.97Å0.95Å
O63H63sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O1110.2°109.5°
C2C1H11A111.9°109.5°
C2C1H12111.9°109.4°
C1C2C3110.8°109.5°
C1C2O2109.6°109.5°
C1C2H2108.8°109.5°
O1C1H11A111.9°109.5°
O1C1H12111.9°109.4°
C1O1P1121.2°106.8°
H11AC1H1298.6°109.5°
C6C5C4110.8°109.5°
C6C5O5109.3°109.5°
C6C5H5108.8°109.5°
C5C6O6110.5°109.5°
C5C6H61111.8°109.4°
C5C6H62A111.8°109.5°
C4C5O5109.6°109.4°
C4C5H5108.5°109.4°
C5C4C3110.9°109.5°
C5C4O4109.6°109.5°
C5C4H4108.5°109.5°
O5C5H5109.8°109.5°
C5O5HO5109.4°106.8°
O6C6H61111.8°109.5°
O6C6H62A111.8°109.5°
C6O6P6119.8°106.8°
H61C6H62A98.6°109.5°
C3C4O4109.8°109.4°
C3C4H4108.4°109.5°
C4C3C2111.5°109.5°
C4C3O3109.0°109.5°
C4C3H3108.3°109.5°
O4C4H4109.7°109.5°
C4O4HO4109.5°106.8°
C2C3O3109.0°109.5°
C2C3H3108.3°109.5°
C3C2O2110.3°109.5°
C3C2H2108.0°109.5°
O3C3H3110.8°109.5°
C3O3HO3109.1°106.8°
O2C2H2109.3°109.4°
C2O2HO2109.5°106.7°
O12P1O13106.5°109.5°
O12P1O11112.8°109.5°
O12P1O1106.2°109.4°
O13P1O11112.5°109.5°
O13P1O1105.8°109.5°
P1O13H13106.5°106.8°
O11P1O1112.4°109.5°
P1O11H11112.9°106.8°
O6P6O62105.2°109.5°
O6P6O63106.7°109.5°
O6P6O61112.2°109.5°
O62P6O63107.0°109.4°
O62P6O61112.7°109.5°
P6O62H62105.2°106.8°
O63P6O61112.4°109.5°
P6O63H63106.7°106.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O1H11A125.2°120.0°
C2C1O1H12125.2°120.0°
C2C1H11AH12117.9°120.0°
C1C2C3C4137.9°180.0°
C1C2C3O2121.5°120.0°
C1C2C3H2119.0°120.0°
C1C2C3O3101.7°60.0°
C1C2C3H318.9°60.0°
C1C2O2H2119.1°120.0°
C2C1O1P1148.8°180.0°
C1C2O2HO2180.0°60.0°
O1C1H11AH12117.8°120.0°
O1C1C2C355.1°175.0°
O1C1C2O266.9°64.9°
O1C1C2H2173.6°55.0°
C1O1P1O1242.6°55.0°
C1O1P1O1370.4°175.0°
C1O1P1O11166.5°65.0°
H11AC1C2C3179.7°55.0°
H11AC1C2O258.4°175.0°
H11AC1C2H261.1°65.0°
H11AC1O1P123.6°60.0°
H12C1C2C370.1°65.0°
H12C1C2O2167.9°55.0°
H12C1C2H248.5°175.0°
H12C1O1P186.0°60.1°
C6C5C4O5120.8°120.0°
C6C5C4H5119.3°120.1°
C6C5O5H5119.3°120.1°
C5C6O6H61125.3°119.9°
C5C6O6H62A125.2°120.0°
C5C6H61H62A117.7°120.0°
C6C5C4C3178.5°180.0°
C6C5C4O460.2°60.0°
C6C5C4H459.6°59.9°
C6C5O5HO5180.0°60.0°
C5C6O6P6176.6°180.0°
C4C5O5H5119.1°119.9°
C4C5C6O6179.5°175.0°
C4C5C6H6154.2°55.0°
C4C5C6H62A55.3°65.0°
C5C4C3O4121.2°120.0°
C5C4C3H4119.0°120.1°
C5C4O4H4119.0°120.0°
C5C4C3C2178.6°175.0°
C5C4C3O361.0°55.0°
C5C4C3H359.6°65.0°
C5C4O4HO4180.0°60.0°
C4C5O5HO558.4°60.0°
O5C5C6O659.6°65.0°
O5C5C6H61175.2°175.0°
O5C5C6H62A65.7°55.0°
O5C5C4C357.7°60.0°
O5C5C4O4179.1°180.0°
O5C5C4H461.2°60.0°
H5C5C6O660.4°55.0°
H5C5C6H6164.9°65.0°
H5C5C6H62A174.4°175.1°
H5C5C4C362.2°59.9°
H5C5C4O459.1°60.0°
H5C5C4H4178.9°180.0°
H5C5O5HO560.7°179.9°
O6C6H61H62A117.7°120.1°
C6O6P6O6271.2°65.0°
C6O6P6O6342.3°175.0°
C6O6P6O61165.9°55.0°
H61C6O6P658.1°60.0°
H62AC6O6P651.4°60.0°
C3C4O4H4118.9°120.0°
C4C3C2O3120.4°120.0°
C4C3C2H3119.0°120.0°
C4C3O3H3119.1°120.0°
C4C3C2O216.4°60.0°
C4C3C2H2103.0°60.0°
C4C3O3HO3180.0°60.0°
C3C4O4HO458.0°60.0°
O4C4C3C260.2°55.0°
O4C4C3O360.2°65.0°
O4C4C3H3179.2°175.0°
H4C4C3C259.6°64.9°
H4C4C3O3180.0°175.0°
H4C4C3H359.4°55.0°
H4C4O4HO461.0°180.0°
C2C3O3H3119.1°120.0°
C3C2O2H2118.6°120.0°
C3C2O2HO257.7°60.0°
C2C3O3HO358.2°60.0°
O3C3C2O2136.8°180.0°
O3C3C2H217.4°60.0°
H3C3C2O2102.6°60.0°
H3C3C2H2138.0°180.0°
H3C3O3HO360.9°180.0°
H2C2O2HO260.9°180.0°
O12P1O13O11124.1°120.0°
O12P1O13O1112.8°119.9°
O12P1O11O1120.2°120.0°
O12P1O13H13180.0°60.0°
O12P1O11H11180.0°180.0°
O13P1O11O1119.4°120.0°
O13P1O11H1159.5°60.0°
O11P1O13H1355.9°60.0°
O1P1O13H1367.2°180.0°
O1P1O11H1159.8°60.0°
O6P6O62O63113.3°120.0°
O6P6O62O61122.6°120.0°
O6P6O63O61123.5°120.0°
O6P6O62H62180.0°60.0°
O6P6O63H63180.0°180.0°
O62P6O63O61124.3°120.0°
O62P6O63H6367.7°60.0°
O63P6O62H6266.7°60.0°
O61P6O62H6257.4°180.0°
O61P6O63H6356.5°60.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon