M1G
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | doub | 1.48Å | 1.48Å | |
| P | OP2 | sing | 1.61Å | 1.48Å | |
| P | OP3 | sing | 1.61Å | 1.61Å | |
| P | O5' | sing | 1.61Å | 1.61Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.43Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| C5' | H5' | sing | 1.09Å | 1.09Å | |
| C5' | H5'' | sing | 1.09Å | 1.09Å | |
| C4' | O4' | sing | 1.45Å | 1.46Å | |
| C4' | C3' | sing | 1.54Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.09Å | |
| O4' | C1' | sing | 1.44Å | 1.46Å | |
| C3' | O3' | sing | 1.43Å | 1.45Å | |
| C3' | C2' | sing | 1.54Å | 1.50Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | C1' | sing | 1.54Å | 1.55Å | |
| C2' | H2' | sing | 1.09Å | 1.09Å | |
| C2' | H2'' | sing | 1.09Å | 1.09Å | |
| C1' | N9 | sing | 1.46Å | 1.51Å | |
| C1' | H1' | sing | 1.09Å | 1.09Å | |
| N9 | C8 | sing | 1.36Å | 1.38Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.45Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.27Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.09Å | |
| N7 | C5 | sing | 1.36Å | 1.37Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.38Å | |
| C5 | C4 | doub | 1.40Å | 1.36Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.22Å | |
| C6 | N1 | sing | 1.35Å | 1.33Å | |
| N1 | C2 | sing | 1.37Å | 1.36Å | |
| N1 | C8A | sing | 1.37Å | 1.36Å | |
| C2 | N2 | sing | 1.34Å | 1.38Å | |
| C2 | N3 | doub | 1.33Å | 1.41Å | |
| N2 | C6A | doub | 1.31Å | 1.39Å | |
| N3 | C4 | sing | 1.33Å | 1.40Å | |
| C6A | C7A | sing | 1.40Å | 1.36Å | |
| C6A | H6A | sing | 1.08Å | 1.09Å | |
| C7A | C8A | doub | 1.36Å | 1.35Å | |
| C7A | H7A | sing | 1.08Å | 1.10Å | |
| C8A | H8A | sing | 1.08Å | 1.09Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 119.8° | 109.5° |
| OP1 | P | OP3 | 108.4° | 109.5° |
| OP1 | P | O5' | 108.4° | 109.5° |
| OP2 | P | OP3 | 108.2° | 109.5° |
| OP2 | P | O5' | 108.2° | 109.5° |
| P | OP2 | HOP2 | 119.8° | 106.8° |
| OP3 | P | O5' | 102.4° | 109.4° |
| P | OP3 | HOP3 | 108.4° | 106.8° |
| P | O5' | C5' | 121.6° | 106.9° |
| O5' | C5' | C4' | 109.7° | 109.5° |
| O5' | C5' | H5' | 109.5° | 109.4° |
| O5' | C5' | H5'' | 109.3° | 109.4° |
| C4' | C5' | H5' | 109.5° | 109.5° |
| C4' | C5' | H5'' | 109.4° | 109.4° |
| C5' | C4' | O4' | 110.8° | 110.4° |
| C5' | C4' | C3' | 108.3° | 110.7° |
| C5' | C4' | H4' | 110.6° | 110.3° |
| H5' | C5' | H5'' | 109.4° | 109.5° |
| O4' | C4' | C3' | 106.4° | 104.7° |
| O4' | C4' | H4' | 110.2° | 110.3° |
| C4' | O4' | C1' | 109.0° | 105.4° |
| C3' | C4' | H4' | 110.5° | 110.2° |
| C4' | C3' | O3' | 109.6° | 110.6° |
| C4' | C3' | C2' | 101.4° | 104.2° |
| C4' | C3' | H3' | 110.4° | 110.5° |
| O4' | C1' | C2' | 104.7° | 104.8° |
| O4' | C1' | N9 | 111.6° | 110.5° |
| O4' | C1' | H1' | 109.9° | 110.3° |
| O3' | C3' | C2' | 113.0° | 110.6° |
| O3' | C3' | H3' | 110.9° | 110.4° |
| C3' | O3' | HO3' | 109.5° | 106.8° |
| C2' | C3' | H3' | 111.2° | 110.5° |
| C3' | C2' | C1' | 104.8° | 104.1° |
| C3' | C2' | H2' | 109.3° | 110.5° |
| C3' | C2' | H2'' | 110.9° | 110.4° |
| C1' | C2' | H2' | 108.5° | 110.5° |
| C1' | C2' | H2'' | 113.8° | 110.5° |
| C2' | C1' | N9 | 111.5° | 110.4° |
| C2' | C1' | H1' | 109.1° | 110.3° |
| H2' | C2' | H2'' | 109.4° | 110.6° |
| N9 | C1' | H1' | 110.0° | 110.4° |
| C1' | N9 | C8 | 127.0° | 126.3° |
| C1' | N9 | C4 | 132.1° | 126.2° |
| C8 | N9 | C4 | 100.8° | 107.5° |
| N9 | C8 | N7 | 118.1° | 109.9° |
| N9 | C8 | H8 | 122.6° | 125.1° |
| N9 | C4 | C5 | 105.7° | 106.0° |
| N9 | C4 | N3 | 133.9° | 134.2° |
| N7 | C8 | H8 | 119.3° | 125.1° |
| C8 | N7 | C5 | 103.0° | 109.4° |
| N7 | C5 | C6 | 127.1° | 134.1° |
| N7 | C5 | C4 | 112.4° | 107.3° |
| C6 | C5 | C4 | 120.5° | 118.6° |
| C5 | C6 | O6 | 124.1° | 120.7° |
| C5 | C6 | N1 | 120.4° | 118.6° |
| C5 | C4 | N3 | 120.4° | 119.8° |
| O6 | C6 | N1 | 115.5° | 120.7° |
| C6 | N1 | C2 | 121.4° | 120.5° |
| C6 | N1 | C8A | 115.9° | 119.4° |
| C2 | N1 | C8A | 122.5° | 120.1° |
| N1 | C2 | N2 | 117.1° | 120.0° |
| N1 | C2 | N3 | 120.1° | 121.2° |
| N1 | C8A | C7A | 120.5° | 119.2° |
| N1 | C8A | H8A | 119.5° | 120.4° |
| N2 | C2 | N3 | 122.8° | 118.8° |
| C2 | N2 | C6A | 119.9° | 121.1° |
| C2 | N3 | C4 | 117.2° | 121.3° |
| N2 | C6A | C7A | 120.8° | 120.3° |
| N2 | C6A | H6A | 119.9° | 119.9° |
| C7A | C6A | H6A | 119.3° | 119.9° |
| C6A | C7A | C8A | 118.2° | 119.2° |
| C6A | C7A | H7A | 119.8° | 120.4° |
| C8A | C7A | H7A | 117.9° | 120.4° |
| C7A | C8A | H8A | 119.8° | 120.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | OP3 | 124.8° | 120.0° |
| OP1 | P | OP2 | O5' | 124.9° | 120.0° |
| OP1 | P | OP3 | O5' | 114.4° | 120.0° |
| OP1 | P | OP2 | HOP2 | 180.0° | 60.0° |
| OP1 | P | OP3 | HOP3 | 180.0° | 180.0° |
| OP1 | P | O5' | C5' | 34.1° | 60.0° |
| OP2 | P | OP3 | O5' | 114.2° | 120.0° |
| OP2 | P | OP3 | HOP3 | 48.6° | 59.9° |
| OP2 | P | O5' | C5' | 165.5° | 180.0° |
| OP3 | P | OP2 | HOP2 | 55.1° | 60.0° |
| OP3 | P | O5' | C5' | 80.3° | 60.0° |
| O5' | P | OP2 | HOP2 | 55.1° | 180.0° |
| O5' | P | OP3 | HOP3 | 65.5° | 60.1° |
| P | O5' | C5' | C4' | 123.2° | 179.9° |
| P | O5' | C5' | H5' | 116.6° | 60.0° |
| P | O5' | C5' | H5'' | 3.3° | 60.0° |
| O5' | C5' | C4' | H5' | 120.2° | 120.0° |
| O5' | C5' | C4' | H5'' | 119.9° | 120.0° |
| O5' | C5' | H5' | H5'' | 119.8° | 119.9° |
| O5' | C5' | C4' | O4' | 65.5° | 61.4° |
| O5' | C5' | C4' | C3' | 50.7° | 176.9° |
| O5' | C5' | C4' | H4' | 171.9° | 60.8° |
| C4' | C5' | H5' | H5'' | 119.9° | 120.0° |
| C5' | C4' | O4' | C3' | 117.5° | 119.2° |
| C5' | C4' | O4' | H4' | 122.8° | 122.2° |
| C5' | C4' | C3' | H4' | 121.3° | 122.3° |
| C5' | C4' | O4' | C1' | 96.3° | 159.5° |
| C5' | C4' | C3' | O3' | 156.4° | 98.4° |
| C5' | C4' | C3' | C2' | 84.0° | 142.7° |
| C5' | C4' | C3' | H3' | 33.9° | 24.1° |
| H5' | C5' | C4' | O4' | 54.7° | 178.6° |
| H5' | C5' | C4' | C3' | 171.0° | 63.1° |
| H5' | C5' | C4' | H4' | 67.8° | 59.2° |
| H5'' | C5' | C4' | O4' | 174.6° | 58.5° |
| H5'' | C5' | C4' | C3' | 69.1° | 56.9° |
| H5'' | C5' | C4' | H4' | 52.0° | 179.2° |
| O4' | C4' | C3' | H4' | 119.6° | 118.6° |
| O4' | C4' | C3' | O3' | 84.6° | 142.5° |
| O4' | C4' | C3' | C2' | 35.1° | 23.7° |
| O4' | C4' | C3' | H3' | 153.0° | 95.0° |
| C4' | O4' | C1' | C2' | 1.6° | 40.4° |
| C4' | O4' | C1' | N9 | 122.4° | 159.3° |
| C4' | O4' | C1' | H1' | 115.4° | 78.3° |
| C3' | C4' | O4' | C1' | 21.2° | 40.3° |
| C4' | C3' | O3' | C2' | 112.3° | 114.9° |
| C4' | C3' | O3' | H3' | 122.2° | 122.5° |
| C4' | C3' | C2' | H3' | 117.4° | 118.6° |
| C4' | C3' | O3' | HO3' | 180.0° | 178.1° |
| C4' | C3' | C2' | C1' | 35.4° | 0.1° |
| C4' | C3' | C2' | H2' | 80.7° | 118.5° |
| C4' | C3' | C2' | H2'' | 158.6° | 118.8° |
| H4' | C4' | O4' | C1' | 140.9° | 78.3° |
| H4' | C4' | C3' | O3' | 35.1° | 23.9° |
| H4' | C4' | C3' | C2' | 154.7° | 94.9° |
| H4' | C4' | C3' | H3' | 87.4° | 146.4° |
| O4' | C1' | C2' | C3' | 23.7° | 24.0° |
| O4' | C1' | C2' | N9 | 120.8° | 118.9° |
| O4' | C1' | C2' | H1' | 117.5° | 118.7° |
| O4' | C1' | C2' | H2' | 93.0° | 94.7° |
| O4' | C1' | C2' | H2'' | 145.0° | 142.5° |
| O4' | C1' | N9 | H1' | 122.2° | 122.3° |
| O4' | C1' | N9 | C8 | 115.7° | 25.5° |
| O4' | C1' | N9 | C4 | 67.5° | 154.8° |
| O3' | C3' | C2' | H3' | 125.4° | 122.5° |
| O3' | C3' | C2' | C1' | 81.7° | 118.7° |
| O3' | C3' | C2' | H2' | 162.1° | 122.6° |
| O3' | C3' | C2' | H2'' | 41.4° | 0.0° |
| C2' | C3' | O3' | HO3' | 67.7° | 63.2° |
| C3' | C2' | C1' | H2' | 116.7° | 118.7° |
| C3' | C2' | C1' | H2'' | 121.3° | 118.6° |
| C3' | C2' | H2' | H2'' | 121.6° | 122.6° |
| C3' | C2' | C1' | N9 | 144.5° | 142.9° |
| C3' | C2' | C1' | H1' | 93.8° | 94.7° |
| H3' | C3' | O3' | HO3' | 57.8° | 59.3° |
| H3' | C3' | C2' | C1' | 152.8° | 118.8° |
| H3' | C3' | C2' | H2' | 36.7° | 0.1° |
| H3' | C3' | C2' | H2'' | 84.0° | 122.6° |
| C1' | C2' | H2' | H2'' | 124.7° | 122.7° |
| C2' | C1' | N9 | H1' | 121.1° | 122.3° |
| C2' | C1' | N9 | C8 | 1.0° | 89.9° |
| C2' | C1' | N9 | C4 | 175.8° | 89.7° |
| H2' | C2' | C1' | N9 | 27.9° | 24.2° |
| H2' | C2' | C1' | H1' | 149.5° | 146.6° |
| H2'' | C2' | C1' | N9 | 94.2° | 98.5° |
| H2'' | C2' | C1' | H1' | 27.4° | 23.8° |
| C1' | N9 | C8 | C4 | 177.6° | 179.7° |
| C1' | N9 | C8 | N7 | 177.7° | 180.0° |
| C1' | N9 | C8 | H8 | 2.5° | 0.1° |
| C1' | N9 | C4 | C5 | 177.5° | 179.9° |
| C1' | N9 | C4 | N3 | 2.7° | 0.7° |
| H1' | C1' | N9 | C8 | 122.1° | 147.8° |
| H1' | C1' | N9 | C4 | 54.7° | 32.6° |
| N9 | C8 | N7 | H8 | 179.8° | 179.9° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| C8 | N9 | C4 | C5 | 0.1° | 0.3° |
| C8 | N9 | C4 | N3 | 179.9° | 179.6° |
| C4 | N9 | C8 | N7 | 0.1° | 0.3° |
| C4 | N9 | C8 | H8 | 179.9° | 179.8° |
| N9 | C4 | C5 | N7 | 0.0° | 0.3° |
| N9 | C4 | C5 | C6 | 179.8° | 179.8° |
| N9 | C4 | C5 | N3 | 179.9° | 179.3° |
| N9 | C4 | N3 | C2 | 179.7° | 179.6° |
| C8 | N7 | C5 | C6 | 179.8° | 180.0° |
| C8 | N7 | C5 | C4 | 0.1° | 0.2° |
| H8 | C8 | N7 | C5 | 179.9° | 180.0° |
| N7 | C5 | C6 | C4 | 179.7° | 179.8° |
| N7 | C5 | C6 | O6 | 0.8° | 0.1° |
| N7 | C5 | C6 | N1 | 179.7° | 180.0° |
| N7 | C5 | C4 | N3 | 179.8° | 179.7° |
| C5 | C6 | O6 | N1 | 179.0° | 179.9° |
| C5 | C6 | N1 | C2 | 0.4° | 0.1° |
| C5 | C6 | N1 | C8A | 175.2° | 180.0° |
| C6 | C5 | C4 | N3 | 0.1° | 0.5° |
| C4 | C5 | C6 | O6 | 179.5° | 179.7° |
| C4 | C5 | C6 | N1 | 0.6° | 0.2° |
| C5 | C4 | N3 | C2 | 0.5° | 0.5° |
| O6 | C6 | N1 | C2 | 179.4° | 180.0° |
| O6 | C6 | N1 | C8A | 5.8° | 0.0° |
| C6 | N1 | C2 | C8A | 174.5° | 179.9° |
| C6 | N1 | C2 | N2 | 179.1° | 180.0° |
| C6 | N1 | C2 | N3 | 0.3° | 0.0° |
| C6 | N1 | C8A | C7A | 171.4° | 180.0° |
| C6 | N1 | C8A | H8A | 5.1° | 0.1° |
| N1 | C2 | N2 | N3 | 178.8° | 180.0° |
| N1 | C2 | N2 | C6A | 5.0° | 0.0° |
| N1 | C2 | N3 | C4 | 0.7° | 0.2° |
| C2 | N1 | C8A | C7A | 3.4° | 0.0° |
| C2 | N1 | C8A | H8A | 179.8° | 179.9° |
| C8A | N1 | C2 | N2 | 4.6° | 0.0° |
| C8A | N1 | C2 | N3 | 174.2° | 180.0° |
| N1 | C8A | C7A | C6A | 10.9° | 0.0° |
| N1 | C8A | C7A | H8A | 176.4° | 179.9° |
| N1 | C8A | C7A | H7A | 168.3° | 180.0° |
| N2 | C2 | N3 | C4 | 179.5° | 179.7° |
| C2 | N2 | C6A | C7A | 2.5° | 0.0° |
| C2 | N2 | C6A | H6A | 179.4° | 180.0° |
| N3 | C2 | N2 | C6A | 173.8° | 180.0° |
| N2 | C6A | C7A | H6A | 178.1° | 180.0° |
| N2 | C6A | C7A | C8A | 10.4° | 0.0° |
| N2 | C6A | C7A | H7A | 167.4° | 180.0° |
| C6A | C7A | C8A | H7A | 157.4° | 180.0° |
| C6A | C7A | C8A | H8A | 172.7° | 179.9° |
| H6A | C6A | C7A | C8A | 171.4° | 180.0° |
| H6A | C6A | C7A | H7A | 14.5° | 0.0° |
| H7A | C7A | C8A | H8A | 15.3° | 0.1° |
