M1D
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.37Å | |
C | O1 | sing | 1.34Å | 1.24Å | |
C | C1 | sing | 1.51Å | 1.51Å | |
C1 | C2 | sing | 1.53Å | 1.54Å | |
C10 | N3 | sing | 1.46Å | 1.49Å | |
N1 | C4 | doub | 1.31Å | 1.39Å | Aromatic |
N1 | C5 | sing | 1.34Å | 1.32Å | Aromatic |
N3 | C5 | sing | 1.39Å | 1.38Å | |
N3 | C9 | sing | 1.35Å | 1.42Å | |
C2 | C3 | sing | 1.53Å | 1.50Å | |
C4 | N | sing | 1.35Å | 1.34Å | Aromatic |
C5 | C6 | doub | 1.39Å | 1.38Å | Aromatic |
O3 | C9 | doub | 1.22Å | 1.25Å | |
C9 | N2 | sing | 1.34Å | 1.42Å | |
N | C6 | sing | 1.38Å | 1.38Å | Aromatic |
N | C3 | sing | 1.47Å | 1.47Å | |
C6 | C7 | sing | 1.41Å | 1.40Å | |
N2 | C7 | sing | 1.35Å | 1.44Å | |
N2 | C8 | sing | 1.46Å | 1.44Å | |
C7 | O2 | doub | 1.22Å | 1.26Å | |
C10 | H1 | sing | 1.09Å | 1.10Å | |
C10 | H2 | sing | 1.09Å | 1.10Å | |
C10 | H3 | sing | 1.09Å | 1.10Å | |
C4 | H4 | sing | 1.08Å | 1.08Å | |
C8 | H5 | sing | 1.09Å | 1.10Å | |
C8 | H6 | sing | 1.09Å | 1.10Å | |
C8 | H7 | sing | 1.09Å | 1.10Å | |
C3 | H8 | sing | 1.09Å | 1.10Å | |
C3 | H9 | sing | 1.09Å | 1.10Å | |
C2 | H10 | sing | 1.09Å | 1.10Å | |
C2 | H11 | sing | 1.09Å | 1.10Å | |
C1 | H12 | sing | 1.09Å | 1.10Å | |
C1 | H13 | sing | 1.09Å | 1.10Å | |
O1 | H14 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | O1 | 120.9° | 120.0° |
O | C | C1 | 122.7° | 120.0° |
O1 | C | C1 | 116.4° | 120.0° |
C | O1 | H14 | 109.5° | 117.0° |
C | C1 | C2 | 109.3° | 109.5° |
C | C1 | H12 | 109.5° | 109.5° |
C | C1 | H13 | 109.5° | 109.5° |
C1 | C2 | C3 | 109.3° | 109.5° |
C1 | C2 | H10 | 109.5° | 109.5° |
C1 | C2 | H11 | 109.5° | 109.5° |
C2 | C1 | H12 | 109.5° | 109.4° |
C2 | C1 | H13 | 109.5° | 109.4° |
C10 | N3 | C5 | 121.5° | 120.0° |
C10 | N3 | C9 | 121.4° | 120.0° |
N3 | C10 | H1 | 109.5° | 109.5° |
N3 | C10 | H2 | 109.5° | 109.5° |
N3 | C10 | H3 | 109.5° | 109.4° |
C4 | N1 | C5 | 110.0° | 109.8° |
N1 | C4 | N | 108.9° | 109.7° |
N1 | C4 | H4 | 125.5° | 125.2° |
N1 | C5 | N3 | 128.9° | 133.9° |
N1 | C5 | C6 | 105.1° | 107.3° |
C5 | N3 | C9 | 117.1° | 120.1° |
N3 | C5 | C6 | 125.8° | 118.8° |
N3 | C9 | O3 | 120.0° | 119.2° |
N3 | C9 | N2 | 119.3° | 121.7° |
C2 | C3 | N | 113.5° | 109.5° |
C2 | C3 | H8 | 108.5° | 109.5° |
C2 | C3 | H9 | 108.4° | 109.5° |
C3 | C2 | H10 | 109.5° | 109.5° |
C3 | C2 | H11 | 109.5° | 109.5° |
C4 | N | C6 | 104.6° | 107.0° |
C4 | N | C3 | 126.4° | 126.5° |
N | C4 | H4 | 125.5° | 125.1° |
C5 | C6 | N | 111.1° | 106.2° |
C5 | C6 | C7 | 118.0° | 119.2° |
O3 | C9 | N2 | 120.5° | 119.1° |
C9 | N2 | C7 | 120.6° | 120.9° |
C9 | N2 | C8 | 122.4° | 119.5° |
C6 | N | C3 | 128.6° | 126.5° |
N | C6 | C7 | 130.9° | 134.6° |
N | C3 | H8 | 108.4° | 109.4° |
N | C3 | H9 | 108.4° | 109.5° |
C6 | C7 | N2 | 119.1° | 119.3° |
C6 | C7 | O2 | 122.1° | 120.4° |
C7 | N2 | C8 | 117.0° | 119.5° |
N2 | C7 | O2 | 118.8° | 120.4° |
N2 | C8 | H5 | 109.5° | 109.5° |
N2 | C8 | H6 | 109.5° | 109.5° |
N2 | C8 | H7 | 109.5° | 109.4° |
H1 | C10 | H2 | 109.4° | 109.5° |
H1 | C10 | H3 | 109.5° | 109.5° |
H2 | C10 | H3 | 109.5° | 109.4° |
H5 | C8 | H6 | 109.5° | 109.5° |
H5 | C8 | H7 | 109.5° | 109.5° |
H6 | C8 | H7 | 109.5° | 109.5° |
H8 | C3 | H9 | 109.5° | 109.5° |
H10 | C2 | H11 | 109.5° | 109.4° |
H12 | C1 | H13 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | O1 | C1 | 178.8° | 180.0° |
O | C | C1 | C2 | 145.6° | 0.0° |
O | C | C1 | H12 | 25.6° | 120.0° |
O | C | C1 | H13 | 94.4° | 120.0° |
O | C | O1 | H14 | 0.0° | 0.0° |
O1 | C | C1 | C2 | 33.2° | 180.0° |
O1 | C | C1 | H12 | 153.2° | 60.0° |
O1 | C | C1 | H13 | 86.7° | 60.0° |
C | C1 | C2 | H12 | 120.0° | 120.0° |
C | C1 | C2 | H13 | 120.0° | 120.0° |
C | C1 | C2 | C3 | 176.6° | 180.0° |
C | C1 | C2 | H10 | 63.5° | 60.0° |
C | C1 | C2 | H11 | 56.6° | 60.0° |
C | C1 | H12 | H13 | 120.1° | 120.0° |
C1 | C | O1 | H14 | 178.9° | 180.0° |
C1 | C2 | C3 | H10 | 120.0° | 120.0° |
C1 | C2 | C3 | H11 | 120.0° | 120.1° |
C1 | C2 | C3 | N | 73.2° | 180.0° |
C1 | C2 | C3 | H8 | 47.4° | 60.0° |
C1 | C2 | C3 | H9 | 166.3° | 60.0° |
C1 | C2 | H10 | H11 | 120.1° | 120.0° |
C2 | C1 | H12 | H13 | 120.1° | 119.9° |
C10 | N3 | C5 | N1 | 1.6° | 0.1° |
C10 | N3 | C5 | C9 | 179.7° | 179.9° |
C10 | N3 | C5 | C6 | 177.2° | 180.0° |
C10 | N3 | C9 | O3 | 1.8° | 0.1° |
C10 | N3 | C9 | N2 | 177.1° | 179.7° |
N3 | C10 | H1 | H2 | 120.0° | 120.0° |
N3 | C10 | H1 | H3 | 120.0° | 120.0° |
N3 | C10 | H2 | H3 | 120.0° | 119.9° |
C4 | N1 | C5 | N3 | 178.2° | 180.0° |
N1 | C4 | N | H4 | 180.0° | 180.0° |
C4 | N1 | C5 | C6 | 2.0° | 0.0° |
N1 | C4 | N | C6 | 3.5° | 0.0° |
N1 | C4 | N | C3 | 177.7° | 180.0° |
N1 | C5 | N3 | C6 | 175.5° | 180.0° |
N1 | C5 | N3 | C9 | 178.7° | 180.0° |
C5 | N1 | C4 | N | 1.0° | 0.0° |
N1 | C5 | C6 | N | 4.3° | 0.0° |
N1 | C5 | C6 | C7 | 178.1° | 179.8° |
C5 | N1 | C4 | H4 | 179.0° | 180.0° |
C5 | N3 | C9 | O3 | 178.6° | 180.0° |
C5 | N3 | C9 | N2 | 3.2° | 0.4° |
N3 | C5 | C6 | N | 179.3° | 180.0° |
N3 | C5 | C6 | C7 | 1.7° | 0.2° |
C5 | N3 | C10 | H1 | 180.0° | 89.9° |
C5 | N3 | C10 | H2 | 60.0° | 150.0° |
C5 | N3 | C10 | H3 | 60.0° | 30.1° |
C9 | N3 | C5 | C6 | 3.1° | 0.1° |
N3 | C9 | O3 | N2 | 175.3° | 179.7° |
N3 | C9 | N2 | C7 | 2.1° | 0.4° |
N3 | C9 | N2 | C8 | 179.3° | 179.7° |
C9 | N3 | C10 | H1 | 0.3° | 90.0° |
C9 | N3 | C10 | H2 | 119.7° | 30.1° |
C9 | N3 | C10 | H3 | 120.3° | 150.0° |
C2 | C3 | N | C4 | 95.1° | 94.9° |
C2 | C3 | N | C6 | 92.2° | 85.0° |
C2 | C3 | N | H8 | 120.6° | 120.0° |
C2 | C3 | N | H9 | 120.6° | 120.0° |
C2 | C3 | H8 | H9 | 118.2° | 120.1° |
C3 | C2 | H10 | H11 | 120.1° | 120.0° |
C3 | C2 | C1 | H12 | 56.6° | 60.0° |
C3 | C2 | C1 | H13 | 63.5° | 60.0° |
C4 | N | C6 | C5 | 4.9° | 0.0° |
C4 | N | C6 | C3 | 174.0° | 180.0° |
C4 | N | C6 | C7 | 177.9° | 179.7° |
C4 | N | C3 | H8 | 25.5° | 25.0° |
C4 | N | C3 | H9 | 144.3° | 145.0° |
C5 | C6 | N | C7 | 177.2° | 179.7° |
C5 | C6 | N | C3 | 178.9° | 180.0° |
C5 | C6 | C7 | N2 | 0.3° | 0.2° |
C5 | C6 | C7 | O2 | 176.8° | 179.8° |
O3 | C9 | N2 | C7 | 177.4° | 180.0° |
O3 | C9 | N2 | C8 | 3.9° | 0.0° |
C9 | N2 | C7 | C6 | 0.6° | 0.1° |
C9 | N2 | C7 | C8 | 178.7° | 179.9° |
C9 | N2 | C7 | O2 | 176.6° | 179.9° |
C9 | N2 | C8 | H5 | 180.0° | 0.0° |
C9 | N2 | C8 | H6 | 60.0° | 120.0° |
C9 | N2 | C8 | H7 | 60.0° | 120.0° |
N | C6 | C7 | N2 | 177.4° | 179.9° |
N | C6 | C7 | O2 | 0.2° | 0.1° |
C6 | N | C4 | H4 | 176.5° | 180.0° |
C6 | N | C3 | H8 | 147.2° | 155.0° |
C6 | N | C3 | H9 | 28.4° | 35.0° |
C3 | N | C6 | C7 | 3.9° | 0.3° |
C3 | N | C4 | H4 | 2.3° | 0.0° |
N | C3 | H8 | H9 | 118.1° | 120.0° |
N | C3 | C2 | H10 | 166.9° | 60.0° |
N | C3 | C2 | H11 | 46.8° | 59.9° |
C6 | C7 | N2 | O2 | 177.2° | 180.0° |
C6 | C7 | N2 | C8 | 179.3° | 180.0° |
C7 | N2 | C8 | H5 | 1.3° | 180.0° |
C7 | N2 | C8 | H6 | 118.7° | 59.9° |
C7 | N2 | C8 | H7 | 121.3° | 60.1° |
C8 | N2 | C7 | O2 | 2.1° | 0.0° |
N2 | C8 | H5 | H6 | 120.0° | 120.0° |
N2 | C8 | H5 | H7 | 120.0° | 120.0° |
N2 | C8 | H6 | H7 | 120.0° | 120.0° |
H1 | C10 | H2 | H3 | 120.0° | 120.0° |
H5 | C8 | H6 | H7 | 120.0° | 120.0° |
H8 | C3 | C2 | H10 | 72.6° | 179.9° |
H8 | C3 | C2 | H11 | 167.4° | 60.0° |
H9 | C3 | C2 | H10 | 46.3° | 60.0° |
H9 | C3 | C2 | H11 | 73.8° | 180.0° |
H10 | C2 | C1 | H12 | 176.6° | 180.0° |
H10 | C2 | C1 | H13 | 56.5° | 60.0° |
H11 | C2 | C1 | H12 | 63.4° | 60.1° |
H11 | C2 | C1 | H13 | 176.6° | 180.0° |