LYR

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N	CA	sing	1.44Å	1.47Å
N	H	sing	1.01Å	1.00Å
N	H2	sing	1.01Å	1.00Å
CA	C	sing	1.52Å	1.59Å
CA	CB	sing	1.53Å	1.49Å
CA	HA	sing	1.09Å	1.10Å
C	O	doub	1.22Å	1.27Å
C	OXT	sing	1.36Å	8.57Å
OXT	HXT	sing	0.98Å	0.95Å
CB	CG	sing	1.53Å	1.61Å
CB	HB2	sing	1.10Å	1.10Å
CB	HB3	sing	1.10Å	1.10Å
CG	CD	sing	1.53Å	1.57Å
CG	HG2	sing	1.10Å	1.10Å
CG	HG3	sing	1.10Å	1.10Å
CD	CE	sing	1.53Å	1.58Å
CD	HD2	sing	1.10Å	1.10Å
CD	HD3	sing	1.10Å	1.10Å
CE	NZ	sing	1.46Å	1.40Å
CE	HE2	sing	1.09Å	1.10Å
CE	HE3	sing	1.10Å	1.10Å
NZ	C1	sing	1.46Å	1.26Å
NZ	HZ	sing	1.02Å	1.00Å
C1	C2	sing	1.50Å	1.56Å
C1	H1	sing	1.09Å	1.11Å
C1	H11	sing	1.10Å	1.11Å
C2	C3	doub	1.35Å	1.28Å
C2	HC2	sing	1.09Å	1.08Å
C3	C4	sing	1.51Å	1.56Å
C3	C5	sing	1.47Å	1.44Å
C4	H41	sing	1.10Å	1.10Å
C4	H42	sing	1.10Å	1.10Å
C4	H43	sing	1.09Å	1.10Å
C5	C6	doub	1.34Å	1.32Å
C5	H5	sing	1.09Å	1.08Å
C6	C7	sing	1.45Å	1.55Å
C6	H6	sing	1.08Å	1.08Å
C7	C80	doub	1.35Å	1.38Å
C7	H7	sing	1.09Å	1.08Å
C80	C8	sing	1.51Å	1.52Å
C80	C9	sing	1.46Å	1.52Å
C8	H81	sing	1.10Å	1.10Å
C8	H82	sing	1.10Å	1.10Å
C8	H83	sing	1.10Å	1.10Å
C9	C10	doub	1.34Å	1.28Å
C9	H9	sing	1.09Å	1.08Å
C10	C11	sing	1.45Å	1.55Å
C10	H10	sing	1.09Å	1.08Å
C11	C12	doub	1.36Å	1.36Å
C11	C17	sing	1.55Å	1.57Å
C12	C13	sing	1.51Å	1.55Å
C12	C14	sing	1.52Å	1.52Å
C13	H131	sing	1.08Å	1.10Å
C13	H132	sing	1.08Å	1.10Å
C13	H133	sing	1.08Å	1.10Å
C14	C15	sing	1.52Å	1.61Å
C14	H141	sing	1.10Å	1.10Å
C14	H142	sing	1.10Å	1.10Å
C15	C16	sing	1.52Å	1.50Å
C15	H151	sing	1.10Å	1.10Å
C15	H152	sing	1.10Å	1.10Å
C16	C17	sing	1.55Å	1.56Å
C16	H161	sing	1.10Å	1.10Å
C16	H162	sing	1.10Å	1.10Å
C17	C18	sing	1.55Å	1.56Å
C17	C19	sing	1.55Å	1.51Å
C18	H181	sing	1.09Å	1.10Å
C18	H182	sing	1.09Å	1.10Å
C18	H183	sing	1.09Å	1.10Å
C19	H191	sing	1.09Å	1.10Å
C19	H192	sing	1.09Å	1.10Å
C19	H193	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
CA	N	H	109.5°	119.1°
CA	N	H2	109.5°	119.1°
N	CA	C	101.5°	106.5°
N	CA	CB	113.6°	112.4°
N	CA	HA	114.2°	106.2°
H	N	H2	109.5°	120.4°
C	CA	CB	115.0°	110.2°
C	CA	HA	112.7°	109.0°
CA	C	O	114.3°	125.2°
CA	C	OXT	90.1°	111.9°
CB	CA	HA	100.4°	112.3°
CA	CB	CG	112.3°	114.7°
CA	CB	HB2	107.9°	109.3°
CA	CB	HB3	108.6°	109.5°
O	C	OXT	93.4°	122.8°
C	OXT	HXT	90.1°	115.2°
CG	CB	HB2	107.9°	108.0°
CG	CB	HB3	108.5°	109.0°
CB	CG	CD	116.8°	113.2°
CB	CG	HG2	105.4°	107.9°
CB	CG	HG3	107.1°	109.7°
HB2	CB	HB3	111.7°	105.9°
CD	CG	HG2	105.4°	109.0°
CD	CG	HG3	107.1°	110.2°
CG	CD	CE	115.6°	113.0°
CG	CD	HD2	106.0°	110.2°
CG	CD	HD3	107.5°	109.2°
HG2	CG	HG3	115.4°	106.6°
CE	CD	HD2	106.1°	109.2°
CE	CD	HD3	107.5°	108.3°
CD	CE	NZ	112.6°	111.9°
CD	CE	HE2	107.7°	110.0°
CD	CE	HE3	108.4°	109.1°
HD2	CD	HD3	114.4°	106.7°
NZ	CE	HE2	107.7°	109.2°
NZ	CE	HE3	108.4°	109.0°
CE	NZ	C1	129.6°	110.8°
CE	NZ	HZ	103.3°	109.4°
HE2	CE	HE3	112.0°	107.4°
C1	NZ	HZ	103.2°	109.0°
NZ	C1	C2	126.2°	111.4°
NZ	C1	H1	106.3°	109.1°
NZ	C1	H11	106.3°	108.5°
C2	C1	H1	106.3°	113.5°
C2	C1	H11	106.3°	107.8°
C1	C2	C3	128.8°	128.6°
C1	C2	HC2	115.6°	113.2°
H1	C1	H11	103.2°	106.4°
C3	C2	HC2	115.6°	118.2°
C2	C3	C4	121.1°	124.0°
C2	C3	C5	120.8°	118.5°
C4	C3	C5	117.9°	117.5°
C3	C4	H41	109.4°	110.5°
C3	C4	H42	109.5°	110.6°
C3	C4	H43	109.5°	113.8°
C3	C5	C6	131.3°	126.7°
C3	C5	H5	114.4°	115.3°
H41	C4	H42	109.5°	108.7°
H41	C4	H43	109.4°	106.8°
H42	C4	H43	109.5°	106.3°
C6	C5	H5	114.3°	118.0°
C5	C6	C7	130.1°	122.5°
C5	C6	H6	114.9°	119.8°
C7	C6	H6	114.9°	117.7°
C6	C7	C80	121.7°	128.5°
C6	C7	H7	119.2°	114.0°
C80	C7	H7	119.2°	117.5°
C7	C80	C8	124.3°	118.4°
C7	C80	C9	118.4°	124.2°
C8	C80	C9	117.3°	117.4°
C80	C8	H81	109.5°	112.4°
C80	C8	H82	109.5°	110.8°
C80	C8	H83	109.5°	110.7°
C80	C9	C10	122.7°	126.3°
C80	C9	H9	118.6°	116.6°
H81	C8	H82	109.5°	106.9°
H81	C8	H83	109.4°	106.9°
H82	C8	H83	109.5°	109.0°
C10	C9	H9	118.7°	117.0°
C9	C10	C11	124.2°	123.2°
C9	C10	H10	117.9°	121.8°
C11	C10	H10	117.9°	115.0°
C10	C11	C12	124.2°	122.1°
C10	C11	C17	113.2°	115.6°
C12	C11	C17	122.5°	122.2°
C11	C12	C13	129.7°	125.8°
C11	C12	C14	125.5°	122.5°
C11	C17	C16	110.2°	111.6°
C11	C17	C18	108.9°	112.0°
C11	C17	C19	109.0°	109.6°
C13	C12	C14	104.7°	111.8°
C12	C13	H131	109.5°	108.9°
C12	C13	H132	109.5°	108.9°
C12	C13	H133	109.5°	108.9°
C12	C14	C15	110.9°	114.6°
C12	C14	H141	108.7°	108.1°
C12	C14	H142	109.0°	109.6°
H131	C13	H132	109.5°	110.2°
H131	C13	H133	109.4°	110.1°
H132	C13	H133	109.5°	109.7°
C15	C14	H141	108.6°	109.3°
C15	C14	H142	109.0°	108.1°
C14	C15	C16	108.6°	110.0°
C14	C15	H151	110.0°	109.7°
C14	C15	H152	109.8°	110.0°
H141	C14	H142	110.6°	106.9°
C16	C15	H151	110.0°	110.3°
C16	C15	H152	109.7°	110.1°
C15	C16	C17	120.0°	112.2°
C15	C16	H161	103.6°	108.7°
C15	C16	H162	106.1°	109.5°
H151	C15	H152	108.8°	106.8°
C17	C16	H161	103.7°	109.9°
C17	C16	H162	106.1°	110.0°
C16	C17	C18	105.3°	106.0°
C16	C17	C19	110.7°	109.0°
H161	C16	H162	118.1°	106.3°
C18	C17	C19	112.6°	108.5°
C17	C18	H181	109.5°	110.5°
C17	C18	H182	109.5°	110.6°
C17	C18	H183	109.5°	110.6°
C17	C19	H191	109.4°	110.6°
C17	C19	H192	109.5°	110.5°
C17	C19	H193	109.5°	110.6°
H181	C18	H182	109.5°	108.3°
H181	C18	H183	109.5°	108.4°
H182	C18	H183	109.4°	108.4°
H191	C19	H192	109.5°	108.4°
H191	C19	H193	109.4°	108.3°
H192	C19	H193	109.4°	108.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
CA	N	H	H2	120.0°	166.3°
N	CA	C	CB	123.1°	122.2°
N	CA	C	HA	122.6°	114.2°
N	CA	CB	HA	122.3°	119.7°
N	CA	C	O	173.5°	5.8°
N	CA	C	OXT	79.7°	176.6°
N	CA	CB	CG	62.1°	57.1°
N	CA	CB	HB2	179.1°	178.6°
N	CA	CB	HB3	57.9°	65.8°
H	N	CA	C	89.2°	13.2°
H	N	CA	CB	146.7°	134.0°
H	N	CA	HA	32.3°	102.9°
H2	N	CA	C	150.8°	179.7°
H2	N	CA	CB	26.7°	59.5°
H2	N	CA	HA	87.7°	63.7°
C	CA	CB	HA	121.3°	121.7°
CA	C	O	OXT	91.7°	177.3°
CA	C	OXT	HXT	180.0°	177.6°
C	CA	CB	CG	178.5°	61.5°
C	CA	CB	HB2	62.7°	60.0°
C	CA	CB	HB3	58.5°	175.7°
CB	CA	C	O	63.4°	116.4°
CB	CA	C	OXT	157.2°	61.2°
CA	CB	CG	HB2	118.8°	122.2°
CA	CB	CG	HB3	120.0°	123.2°
CA	CB	HB2	HB3	119.2°	117.9°
CA	CB	CG	CD	164.5°	177.8°
CA	CB	CG	HG2	78.9°	61.5°
CA	CB	CG	HG3	44.5°	54.2°
HA	CA	C	O	50.9°	120.0°
HA	CA	C	OXT	42.9°	62.4°
HA	CA	CB	CG	60.2°	176.8°
HA	CA	CB	HB2	58.6°	61.7°
HA	CA	CB	HB3	179.8°	54.0°
O	C	OXT	HXT	65.6°	0.0°
CG	CB	HB2	HB3	119.2°	116.6°
CB	CG	CD	HG2	116.6°	120.1°
CB	CG	CD	HG3	120.0°	123.3°
CB	CG	HG2	HG3	117.9°	117.7°
CB	CG	CD	CE	174.9°	177.6°
CB	CG	CD	HD2	67.9°	59.9°
CB	CG	CD	HD3	54.9°	57.0°
HB2	CB	CG	CD	45.7°	60.0°
HB2	CB	CG	HG2	162.3°	60.7°
HB2	CB	CG	HG3	74.3°	176.4°
HB3	CB	CG	CD	75.5°	54.6°
HB3	CB	CG	HG2	41.1°	175.3°
HB3	CB	CG	HG3	164.5°	68.9°
CD	CG	HG2	HG3	117.9°	118.9°
CG	CD	CE	HD2	117.2°	123.0°
CG	CD	CE	HD3	120.0°	121.1°
CG	CD	HD2	HD3	118.3°	118.4°
CG	CD	CE	NZ	53.9°	58.3°
CG	CD	CE	HE2	172.5°	180.0°
CG	CD	CE	HE3	66.1°	62.4°
HG2	CG	CD	CE	58.3°	57.5°
HG2	CG	CD	HD2	175.5°	180.0°
HG2	CG	CD	HD3	61.7°	63.1°
HG3	CG	CD	CE	65.1°	59.1°
HG3	CG	CD	HD2	52.1°	63.3°
HG3	CG	CD	HD3	174.9°	179.8°
CE	CD	HD2	HD3	118.3°	116.9°
CD	CE	NZ	HE2	118.6°	122.1°
CD	CE	NZ	HE3	120.0°	120.8°
CD	CE	HE2	HE3	119.1°	118.7°
CD	CE	NZ	C1	99.2°	177.9°
CD	CE	NZ	HZ	140.8°	61.9°
HD2	CD	CE	NZ	63.3°	178.6°
HD2	CD	CE	HE2	55.3°	57.0°
HD2	CD	CE	HE3	176.7°	60.6°
HD3	CD	CE	NZ	173.9°	62.7°
HD3	CD	CE	HE2	67.4°	58.9°
HD3	CD	CE	HE3	53.9°	176.5°
NZ	CE	HE2	HE3	119.1°	118.1°
CE	NZ	C1	HZ	120.0°	120.4°
CE	NZ	C1	C2	176.0°	179.6°
CE	NZ	C1	H1	58.8°	53.5°
CE	NZ	C1	H11	50.7°	61.9°
HE2	CE	NZ	C1	142.1°	60.0°
HE2	CE	NZ	HZ	22.1°	60.2°
HE3	CE	NZ	C1	20.8°	57.1°
HE3	CE	NZ	HZ	99.3°	177.3°
NZ	C1	C2	H1	125.3°	123.6°
NZ	C1	C2	H11	125.3°	118.9°
NZ	C1	H1	H11	111.7°	116.8°
NZ	C1	C2	C3	167.2°	123.5°
NZ	C1	C2	HC2	12.7°	57.8°
HZ	NZ	C1	C2	55.9°	60.0°
HZ	NZ	C1	H1	178.8°	174.0°
HZ	NZ	C1	H11	69.4°	58.5°
C2	C1	H1	H11	111.7°	118.4°
C1	C2	C3	HC2	180.0°	178.7°
C1	C2	C3	C4	3.3°	1.5°
C1	C2	C3	C5	172.5°	178.8°
H1	C1	C2	C3	42.0°	0.1°
H1	C1	C2	HC2	138.0°	178.6°
H11	C1	C2	C3	67.5°	117.6°
H11	C1	C2	HC2	112.5°	61.1°
C2	C3	C4	C5	175.9°	179.7°
C2	C3	C4	H41	140.9°	117.5°
C2	C3	C4	H42	20.9°	122.1°
C2	C3	C4	H43	99.1°	2.6°
C2	C3	C5	C6	152.3°	40.0°
C2	C3	C5	H5	27.7°	140.1°
HC2	C2	C3	C4	176.8°	179.8°
HC2	C2	C3	C5	7.4°	0.2°
C3	C4	H41	H42	120.0°	121.5°
C3	C4	H41	H43	120.0°	124.2°
C3	C4	H42	H43	120.0°	123.9°
C4	C3	C5	C6	23.6°	139.6°
C4	C3	C5	H5	156.4°	40.2°
C5	C3	C4	H41	43.2°	62.8°
C5	C3	C4	H42	163.2°	57.5°
C5	C3	C4	H43	76.8°	177.1°
C3	C5	C6	H5	180.0°	179.8°
C3	C5	C6	C7	5.0°	0.0°
C3	C5	C6	H6	175.0°	179.9°
H41	C4	H42	H43	120.0°	114.7°
C5	C6	C7	H6	180.0°	179.9°
C5	C6	C7	C80	171.1°	180.0°
C5	C6	C7	H7	8.9°	0.0°
H5	C5	C6	C7	175.1°	179.8°
H5	C5	C6	H6	5.0°	0.2°
C6	C7	C80	H7	180.0°	179.9°
C6	C7	C80	C8	4.1°	0.1°
C6	C7	C80	C9	174.4°	180.0°
H6	C6	C7	C80	8.9°	0.1°
H6	C6	C7	H7	171.1°	180.0°
C7	C80	C8	C9	178.5°	179.9°
C7	C80	C8	H81	179.9°	0.0°
C7	C80	C8	H82	60.0°	119.5°
C7	C80	C8	H83	60.0°	119.5°
C7	C80	C9	C10	170.0°	179.9°
C7	C80	C9	H9	10.0°	0.0°
H7	C7	C80	C8	175.9°	180.0°
H7	C7	C80	C9	5.6°	0.1°
C80	C8	H81	H82	120.0°	121.7°
C80	C8	H81	H83	120.0°	121.7°
C80	C8	H82	H83	120.0°	122.1°
C8	C80	C9	C10	8.7°	0.0°
C8	C80	C9	H9	171.3°	179.9°
C9	C80	C8	H81	1.5°	179.9°
C9	C80	C8	H82	118.5°	60.5°
C9	C80	C8	H83	121.5°	60.5°
C80	C9	C10	H9	180.0°	180.0°
C80	C9	C10	C11	155.4°	180.0°
C80	C9	C10	H10	24.6°	0.0°
H81	C8	H82	H83	120.0°	115.2°
C9	C10	C11	H10	180.0°	180.0°
C9	C10	C11	C12	50.1°	40.0°
C9	C10	C11	C17	131.4°	141.1°
H9	C9	C10	C11	24.6°	0.0°
H9	C9	C10	H10	155.4°	180.0°
C10	C11	C12	C17	178.4°	178.8°
C10	C11	C12	C13	1.1°	3.7°
C10	C11	C12	C14	174.2°	176.2°
C10	C11	C17	C16	178.1°	168.2°
C10	C11	C17	C18	63.0°	49.5°
C10	C11	C17	C19	60.3°	71.0°
H10	C10	C11	C12	129.9°	140.0°
H10	C10	C11	C17	48.6°	38.9°
C11	C12	C13	C14	176.0°	180.0°
C11	C12	C13	H131	82.1°	139.5°
C11	C12	C13	H132	37.9°	19.4°
C11	C12	C13	H133	157.9°	100.3°
C11	C12	C14	C15	18.3°	13.4°
C11	C12	C14	H141	101.1°	108.8°
C11	C12	C14	H142	138.3°	135.1°
C12	C11	C17	C16	3.4°	12.9°
C12	C11	C17	C18	118.4°	131.6°
C12	C11	C17	C19	118.3°	107.9°
C17	C11	C12	C13	177.3°	177.4°
C17	C11	C12	C14	7.4°	2.6°
C11	C17	C16	C15	29.9°	44.4°
C11	C17	C16	C18	117.3°	122.2°
C11	C17	C16	C19	120.7°	121.2°
C11	C17	C16	H161	84.9°	76.7°
C11	C17	C16	H162	149.9°	166.6°
C11	C17	C18	C19	121.1°	121.1°
C11	C17	C18	H181	9.2°	164.6°
C11	C17	C18	H182	110.8°	44.6°
C11	C17	C18	H183	129.2°	75.5°
C11	C17	C19	H191	114.8°	152.4°
C11	C17	C19	H192	125.2°	87.5°
C11	C17	C19	H193	5.2°	32.5°
C12	C13	H131	H132	120.0°	119.4°
C12	C13	H131	H133	120.0°	119.4°
C12	C13	H132	H133	120.0°	119.2°
C13	C12	C14	C15	157.9°	166.6°
C13	C12	C14	H141	82.7°	71.2°
C13	C12	C14	H142	37.9°	44.9°
C14	C12	C13	H131	101.8°	40.4°
C14	C12	C13	H132	138.1°	160.6°
C14	C12	C13	H133	18.1°	79.7°
C12	C14	C15	H141	119.4°	121.5°
C12	C14	C15	H142	120.0°	122.5°
C12	C14	H141	H142	119.6°	117.8°
C12	C14	C15	C16	45.9°	44.1°
C12	C14	C15	H151	166.3°	165.5°
C12	C14	C15	H152	74.0°	77.3°
H131	C13	H132	H133	120.0°	121.4°
C15	C14	H141	H142	119.6°	116.8°
C14	C15	C16	H151	120.4°	121.1°
C14	C15	C16	H152	120.0°	121.3°
C14	C15	H151	H152	120.3°	119.1°
C14	C15	C16	C17	54.6°	60.5°
C14	C15	C16	H161	60.2°	61.3°
C14	C15	C16	H162	174.7°	177.0°
H141	C14	C15	C16	73.4°	77.4°
H141	C14	C15	H151	46.9°	44.0°
H141	C14	C15	H152	166.6°	161.2°
H142	C14	C15	C16	166.0°	166.6°
H142	C14	C15	H151	73.7°	72.0°
H142	C14	C15	H152	46.0°	45.2°
C16	C15	H151	H152	120.2°	119.6°
C15	C16	C17	H161	114.8°	121.1°
C15	C16	C17	H162	120.0°	122.2°
C15	C16	H161	H162	116.9°	117.8°
C15	C16	C17	C18	87.4°	166.6°
C15	C16	C17	C19	150.6°	76.7°
H151	C15	C16	C17	175.0°	178.4°
H151	C15	C16	H161	60.1°	59.8°
H151	C15	C16	H162	64.9°	55.9°
H152	C15	C16	C17	65.4°	60.8°
H152	C15	C16	H161	179.8°	177.4°
H152	C15	C16	H162	54.7°	61.6°
C17	C16	H161	H162	117.0°	119.0°
C16	C17	C18	C19	120.8°	117.0°
C16	C17	C18	H181	109.0°	73.5°
C16	C17	C18	H182	131.0°	166.6°
C16	C17	C18	H183	11.0°	46.5°
C16	C17	C19	H191	6.6°	85.2°
C16	C17	C19	H192	113.5°	34.9°
C16	C17	C19	H193	126.5°	154.9°
H161	C16	C17	C18	157.8°	45.6°
H161	C16	C17	C19	35.7°	162.2°
H162	C16	C17	C18	32.6°	71.2°
H162	C16	C17	C19	89.4°	45.5°
C17	C18	H181	H182	120.0°	121.3°
C17	C18	H181	H183	120.0°	121.3°
C17	C18	H182	H183	120.0°	121.4°
C18	C17	C19	H191	124.2°	29.8°
C18	C17	C19	H192	4.2°	149.9°
C18	C17	C19	H193	115.8°	90.1°
C19	C17	C18	H181	130.3°	43.5°
C19	C17	C18	H182	10.2°	76.5°
C19	C17	C18	H183	109.7°	163.4°
C17	C19	H191	H192	120.0°	121.3°
C17	C19	H191	H193	120.0°	121.3°
C17	C19	H192	H193	120.0°	121.3°
H181	C18	H182	H183	120.0°	117.4°
H191	C19	H192	H193	120.0°	117.4°

Definition date:	2005-03-17
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB