LYN
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.49Å | |
| N | H | sing | 1.01Å | 0.98Å | |
| N | H2 | sing | 1.01Å | 1.02Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.08Å | |
| CB | CG | sing | 1.53Å | 1.53Å | |
| CB | HB2 | sing | 1.09Å | 1.08Å | |
| CB | HB3 | sing | 1.09Å | 1.08Å | |
| CG | CD | sing | 1.53Å | 1.53Å | |
| CG | HG2 | sing | 1.09Å | 1.08Å | |
| CG | HG3 | sing | 1.09Å | 1.08Å | |
| CD | CE | sing | 1.53Å | 1.53Å | |
| CD | HD2 | sing | 1.09Å | 1.08Å | |
| CD | HD3 | sing | 1.09Å | 1.08Å | |
| CE | NZ | sing | 1.47Å | 1.49Å | |
| CE | HE2 | sing | 1.09Å | 1.08Å | |
| CE | HE3 | sing | 1.09Å | 1.08Å | |
| NZ | HZ1 | sing | 1.01Å | 1.04Å | |
| NZ | HZ2 | sing | 1.01Å | 1.04Å | |
| NZ | HZ3 | sing | 1.01Å | 1.04Å | |
| C | O | doub | 1.21Å | 1.21Å | |
| C | NT | sing | 1.35Å | 1.30Å | |
| NT | HNT1 | sing | 0.97Å | 0.98Å | |
| NT | HNT2 | sing | 0.97Å | 0.98Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 119.9° | 106.7° |
| CA | N | H2 | 112.2° | 106.7° |
| N | CA | CB | 109.4° | 109.4° |
| N | CA | C | 109.4° | 109.5° |
| N | CA | HA | 109.4° | 109.5° |
| H | N | H2 | 117.1° | 106.7° |
| CB | CA | C | 109.5° | 109.5° |
| CB | CA | HA | 109.5° | 109.5° |
| CA | CB | CG | 109.5° | 109.5° |
| CA | CB | HB2 | 109.5° | 109.5° |
| CA | CB | HB3 | 109.5° | 109.4° |
| C | CA | HA | 109.5° | 109.5° |
| CA | C | O | 120.9° | 120.0° |
| CA | C | NT | 119.2° | 120.0° |
| CG | CB | HB2 | 109.4° | 109.5° |
| CG | CB | HB3 | 109.5° | 109.5° |
| CB | CG | CD | 109.5° | 109.4° |
| CB | CG | HG2 | 109.5° | 109.4° |
| CB | CG | HG3 | 109.4° | 109.4° |
| HB2 | CB | HB3 | 109.5° | 109.5° |
| CD | CG | HG2 | 109.4° | 109.5° |
| CD | CG | HG3 | 109.6° | 109.5° |
| CG | CD | CE | 109.5° | 109.4° |
| CG | CD | HD2 | 109.5° | 109.5° |
| CG | CD | HD3 | 109.4° | 109.5° |
| HG2 | CG | HG3 | 109.5° | 109.5° |
| CE | CD | HD2 | 109.3° | 109.5° |
| CE | CD | HD3 | 109.5° | 109.4° |
| CD | CE | NZ | 109.5° | 109.5° |
| CD | CE | HE2 | 109.5° | 109.5° |
| CD | CE | HE3 | 109.4° | 109.4° |
| HD2 | CD | HD3 | 109.5° | 109.5° |
| NZ | CE | HE2 | 109.5° | 109.5° |
| NZ | CE | HE3 | 109.5° | 109.5° |
| CE | NZ | HZ1 | 109.5° | 109.5° |
| CE | NZ | HZ2 | 109.4° | 109.4° |
| CE | NZ | HZ3 | 109.5° | 109.5° |
| HE2 | CE | HE3 | 109.5° | 109.5° |
| HZ1 | NZ | HZ2 | 109.6° | 109.4° |
| HZ1 | NZ | HZ3 | 109.3° | 109.5° |
| HZ2 | NZ | HZ3 | 109.5° | 109.5° |
| O | C | NT | 119.9° | 120.0° |
| C | NT | HNT1 | 120.0° | 120.0° |
| C | NT | HNT2 | 120.0° | 120.0° |
| HNT1 | NT | HNT2 | 120.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 141.6° | 113.8° |
| N | CA | CB | C | 120.0° | 120.0° |
| N | CA | CB | HA | 119.9° | 120.0° |
| N | CA | C | HA | 119.9° | 120.0° |
| N | CA | CB | CG | 63.1° | 65.0° |
| N | CA | CB | HB2 | 177.0° | 55.0° |
| N | CA | CB | HB3 | 57.1° | 175.0° |
| N | CA | C | O | 153.6° | 20.0° |
| N | CA | C | NT | 26.5° | 160.0° |
| H | N | CA | CB | 88.5° | 60.0° |
| H | N | CA | C | 31.5° | 60.0° |
| H | N | CA | HA | 151.5° | 180.0° |
| H2 | N | CA | CB | 54.8° | 53.8° |
| H2 | N | CA | C | 174.8° | 173.8° |
| H2 | N | CA | HA | 65.2° | 66.2° |
| CB | CA | C | HA | 120.1° | 120.0° |
| CA | CB | CG | HB2 | 120.0° | 120.0° |
| CA | CB | CG | HB3 | 120.1° | 119.9° |
| CA | CB | HB2 | HB3 | 120.0° | 119.9° |
| CA | CB | CG | CD | 155.1° | 180.0° |
| CA | CB | CG | HG2 | 85.0° | 60.0° |
| CA | CB | CG | HG3 | 35.0° | 60.0° |
| CB | CA | C | O | 33.7° | 99.9° |
| CB | CA | C | NT | 146.4° | 80.0° |
| C | CA | CB | CG | 177.0° | 175.0° |
| C | CA | CB | HB2 | 57.1° | 65.0° |
| C | CA | CB | HB3 | 62.9° | 55.0° |
| CA | C | O | NT | 179.9° | 179.9° |
| CA | C | NT | HNT1 | 0.1° | 0.0° |
| CA | C | NT | HNT2 | 179.9° | 180.0° |
| HA | CA | CB | CG | 56.9° | 55.0° |
| HA | CA | CB | HB2 | 63.0° | 175.0° |
| HA | CA | CB | HB3 | 177.0° | 65.0° |
| HA | CA | C | O | 86.4° | 140.0° |
| HA | CA | C | NT | 93.5° | 40.0° |
| CG | CB | HB2 | HB3 | 120.0° | 120.0° |
| CB | CG | CD | HG2 | 120.0° | 120.0° |
| CB | CG | CD | HG3 | 120.0° | 120.0° |
| CB | CG | HG2 | HG3 | 119.9° | 120.0° |
| CB | CG | CD | CE | 93.4° | NaN° |
| CB | CG | CD | HD2 | 26.5° | 60.0° |
| CB | CG | CD | HD3 | 146.6° | 60.0° |
| HB2 | CB | CG | CD | 35.1° | 60.0° |
| HB2 | CB | CG | HG2 | 155.1° | 180.0° |
| HB2 | CB | CG | HG3 | 85.0° | 60.0° |
| HB3 | CB | CG | CD | 84.8° | 60.0° |
| HB3 | CB | CG | HG2 | 35.1° | 60.0° |
| HB3 | CB | CG | HG3 | 155.0° | 180.0° |
| CD | CG | HG2 | HG3 | 120.1° | 120.1° |
| CG | CD | CE | HD2 | 120.0° | 120.0° |
| CG | CD | CE | HD3 | 120.0° | 120.0° |
| CG | CD | HD2 | HD3 | 120.0° | 120.1° |
| CG | CD | CE | NZ | 155.4° | 180.0° |
| CG | CD | CE | HE2 | 84.5° | 60.0° |
| CG | CD | CE | HE3 | 35.5° | 60.0° |
| HG2 | CG | CD | CE | 146.6° | 60.0° |
| HG2 | CG | CD | HD2 | 93.5° | 180.0° |
| HG2 | CG | CD | HD3 | 26.6° | 59.9° |
| HG3 | CG | CD | CE | 26.6° | 60.0° |
| HG3 | CG | CD | HD2 | 146.5° | 59.9° |
| HG3 | CG | CD | HD3 | 93.4° | 180.0° |
| CE | CD | HD2 | HD3 | 120.0° | 120.0° |
| CD | CE | NZ | HE2 | 120.1° | 120.0° |
| CD | CE | NZ | HE3 | 119.9° | 120.0° |
| CD | CE | HE2 | HE3 | 120.0° | 120.0° |
| CD | CE | NZ | HZ1 | 174.3° | 60.0° |
| CD | CE | NZ | HZ2 | 65.6° | 60.0° |
| CD | CE | NZ | HZ3 | 54.4° | 180.0° |
| HD2 | CD | CE | NZ | 35.4° | 60.0° |
| HD2 | CD | CE | HE2 | 155.5° | 180.0° |
| HD2 | CD | CE | HE3 | 84.5° | 60.0° |
| HD3 | CD | CE | NZ | 84.6° | 60.0° |
| HD3 | CD | CE | HE2 | 35.5° | 60.0° |
| HD3 | CD | CE | HE3 | 155.5° | 180.0° |
| NZ | CE | HE2 | HE3 | 120.0° | 120.0° |
| CE | NZ | HZ1 | HZ2 | 120.0° | 120.0° |
| CE | NZ | HZ1 | HZ3 | 120.0° | 120.1° |
| CE | NZ | HZ2 | HZ3 | 120.1° | 120.0° |
| HE2 | CE | NZ | HZ1 | 54.2° | 180.0° |
| HE2 | CE | NZ | HZ2 | 174.3° | 60.0° |
| HE2 | CE | NZ | HZ3 | 65.6° | 60.0° |
| HE3 | CE | NZ | HZ1 | 65.8° | 60.0° |
| HE3 | CE | NZ | HZ2 | 54.3° | 180.0° |
| HE3 | CE | NZ | HZ3 | 174.4° | 60.1° |
| HZ1 | NZ | HZ2 | HZ3 | 119.9° | 120.0° |
| O | C | NT | HNT1 | 180.0° | 180.0° |
| O | C | NT | HNT2 | 0.0° | 0.0° |
| C | NT | HNT1 | HNT2 | 180.0° | 180.0° |
