LXR
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C6 | doub | 1.32Å | 1.41Å | Aromatic |
N1 | C9 | sing | 1.33Å | 1.35Å | Aromatic |
C6 | N3 | sing | 1.32Å | 1.42Å | Aromatic |
N7 | C9 | sing | 1.38Å | 1.34Å | |
C9 | C8 | doub | 1.40Å | 1.35Å | Aromatic |
N3 | C7 | doub | 1.33Å | 1.36Å | Aromatic |
C8 | C7 | sing | 1.41Å | 1.35Å | Aromatic |
C8 | N4 | sing | 1.35Å | 1.35Å | Aromatic |
C7 | N5 | sing | 1.37Å | 1.35Å | Aromatic |
N4 | C10 | doub | 1.30Å | 1.34Å | Aromatic |
N5 | C5 | sing | 1.47Å | 1.50Å | |
N5 | C10 | sing | 1.36Å | 1.34Å | Aromatic |
C5 | O4 | sing | 1.44Å | 1.48Å | |
C5 | C4 | sing | 1.54Å | 1.52Å | |
O6 | C4 | sing | 1.43Å | 1.43Å | |
O4 | C2 | sing | 1.44Å | 1.46Å | |
C4 | C3 | sing | 1.55Å | 1.55Å | |
C12 | C11 | doub | 1.34Å | 1.33Å | Aromatic |
C12 | N9 | sing | 1.34Å | 1.33Å | Aromatic |
C11 | N6 | sing | 1.38Å | 1.34Å | Aromatic |
C2 | C3 | sing | 1.54Å | 1.53Å | |
C2 | C1 | sing | 1.53Å | 1.54Å | |
O3 | C1 | sing | 1.43Å | 1.42Å | |
O3 | P1 | sing | 1.61Å | 1.62Å | |
C3 | O5 | sing | 1.43Å | 1.45Å | |
O1 | P1 | doub | 1.48Å | 1.47Å | |
N9 | C13 | doub | 1.31Å | 1.33Å | Aromatic |
N6 | P1 | sing | 1.64Å | 1.84Å | |
N6 | C13 | sing | 1.36Å | 1.34Å | Aromatic |
P1 | O2 | sing | 1.61Å | 1.61Å | |
C13 | N8 | sing | 1.39Å | 1.33Å | |
C10 | H1 | sing | 1.08Å | 1.08Å | |
C11 | H2 | sing | 1.08Å | 1.08Å | |
C12 | H3 | sing | 1.08Å | 1.08Å | |
N8 | H4 | sing | 0.97Å | 1.00Å | |
N8 | H5 | sing | 0.97Å | 1.00Å | |
O2 | H6 | sing | 0.97Å | 0.95Å | |
C1 | H7 | sing | 1.09Å | 1.10Å | |
C1 | H8 | sing | 1.09Å | 1.10Å | |
C2 | H9 | sing | 1.09Å | 1.10Å | |
C3 | H10 | sing | 1.09Å | 1.10Å | |
O5 | H11 | sing | 0.97Å | 0.95Å | |
C4 | H12 | sing | 1.09Å | 1.10Å | |
O6 | H13 | sing | 0.97Å | 0.95Å | |
C5 | H14 | sing | 1.09Å | 1.10Å | |
C6 | H15 | sing | 1.08Å | 1.08Å | |
N7 | H16 | sing | 0.97Å | 1.00Å | |
N7 | H17 | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C6 | N1 | C9 | 118.3° | 121.2° |
N1 | C6 | N3 | 117.7° | 122.4° |
N1 | C6 | H15 | 121.2° | 118.8° |
N1 | C9 | N7 | 120.1° | 120.8° |
N1 | C9 | C8 | 123.0° | 118.4° |
C6 | N3 | C7 | 120.8° | 120.7° |
N3 | C6 | H15 | 121.1° | 118.8° |
N7 | C9 | C8 | 116.9° | 120.8° |
C9 | N7 | H16 | 109.5° | 120.0° |
C9 | N7 | H17 | 109.5° | 120.0° |
C9 | C8 | C7 | 120.4° | 118.2° |
C9 | C8 | N4 | 131.2° | 134.7° |
N3 | C7 | C8 | 119.9° | 119.1° |
N3 | C7 | N5 | 132.6° | 134.9° |
C7 | C8 | N4 | 108.3° | 107.1° |
C8 | C7 | N5 | 107.5° | 106.0° |
C8 | N4 | C10 | 107.4° | 109.5° |
C7 | N5 | C5 | 128.5° | 126.2° |
C7 | N5 | C10 | 107.6° | 107.4° |
N4 | C10 | N5 | 109.2° | 110.0° |
N4 | C10 | H1 | 125.4° | 125.1° |
C5 | N5 | C10 | 123.9° | 126.3° |
N5 | C5 | O4 | 114.9° | 110.3° |
N5 | C5 | C4 | 108.9° | 110.4° |
N5 | C5 | H14 | 108.8° | 110.4° |
N5 | C10 | H1 | 125.4° | 125.0° |
O4 | C5 | C4 | 106.6° | 104.8° |
C5 | O4 | C2 | 107.0° | 105.2° |
O4 | C5 | H14 | 109.0° | 110.4° |
C5 | C4 | O6 | 106.5° | 110.6° |
C5 | C4 | C3 | 105.3° | 104.1° |
C5 | C4 | H12 | 109.6° | 110.5° |
C4 | C5 | H14 | 108.4° | 110.4° |
O6 | C4 | C3 | 114.9° | 110.5° |
O6 | C4 | H12 | 111.0° | 110.5° |
C4 | O6 | H13 | 109.5° | 114.0° |
O4 | C2 | C3 | 104.5° | 104.8° |
O4 | C2 | C1 | 114.3° | 110.4° |
O4 | C2 | H9 | 110.8° | 110.5° |
C4 | C3 | C2 | 104.4° | 104.0° |
C4 | C3 | O5 | 114.1° | 110.5° |
C4 | C3 | H10 | 108.8° | 110.7° |
C3 | C4 | H12 | 109.2° | 110.5° |
C11 | C12 | N9 | 107.8° | 108.3° |
C12 | C11 | N6 | 110.1° | 107.0° |
C12 | C11 | H2 | 125.0° | 126.6° |
C11 | C12 | H3 | 126.1° | 125.8° |
C12 | N9 | C13 | 106.8° | 109.3° |
N9 | C12 | H3 | 126.1° | 125.9° |
C11 | N6 | P1 | 121.6° | 126.5° |
C11 | N6 | C13 | 104.6° | 107.0° |
N6 | C11 | H2 | 124.9° | 126.5° |
C3 | C2 | C1 | 107.5° | 110.4° |
C2 | C3 | O5 | 110.1° | 110.5° |
C3 | C2 | H9 | 109.8° | 110.4° |
C2 | C3 | H10 | 109.1° | 110.5° |
C2 | C1 | O3 | 110.1° | 109.5° |
C2 | C1 | H7 | 109.3° | 109.4° |
C2 | C1 | H8 | 109.3° | 109.5° |
C1 | C2 | H9 | 109.8° | 110.3° |
C1 | O3 | P1 | 120.5° | 123.0° |
O3 | C1 | H7 | 109.3° | 109.4° |
O3 | C1 | H8 | 109.3° | 109.5° |
O3 | P1 | O1 | 103.4° | 109.5° |
O3 | P1 | N6 | 111.9° | 109.4° |
O3 | P1 | O2 | 100.5° | 109.5° |
O5 | C3 | H10 | 110.1° | 110.5° |
C3 | O5 | H11 | 109.5° | 114.0° |
O1 | P1 | N6 | 119.8° | 109.5° |
O1 | P1 | O2 | 107.6° | 109.5° |
N9 | C13 | N6 | 110.6° | 108.4° |
N9 | C13 | N8 | 122.8° | 125.8° |
P1 | N6 | C13 | 133.7° | 126.4° |
N6 | P1 | O2 | 111.7° | 109.5° |
N6 | C13 | N8 | 126.5° | 125.8° |
P1 | O2 | H6 | 109.5° | 114.0° |
C13 | N8 | H4 | 109.5° | 120.0° |
C13 | N8 | H5 | 109.5° | 120.0° |
H4 | N8 | H5 | 109.5° | 120.0° |
H7 | C1 | H8 | 109.5° | 109.5° |
H16 | N7 | H17 | 109.4° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C6 | N3 | H15 | 180.0° | 180.0° |
C6 | N1 | C9 | N7 | 179.5° | 180.0° |
C6 | N1 | C9 | C8 | 0.0° | 0.0° |
N1 | C6 | N3 | C7 | 0.3° | 0.0° |
C9 | N1 | C6 | N3 | 0.6° | 0.0° |
N1 | C9 | N7 | C8 | 179.5° | 180.0° |
N1 | C9 | C8 | C7 | 0.8° | 0.0° |
N1 | C9 | C8 | N4 | 179.8° | 180.0° |
C9 | N1 | C6 | H15 | 179.4° | 180.0° |
N1 | C9 | N7 | H16 | 0.0° | 0.0° |
N1 | C9 | N7 | H17 | 120.0° | 180.0° |
C6 | N3 | C7 | C8 | 0.5° | 0.0° |
C6 | N3 | C7 | N5 | 179.8° | 180.0° |
N7 | C9 | C8 | C7 | 179.7° | 180.0° |
N7 | C9 | C8 | N4 | 0.6° | 0.0° |
C9 | N7 | H16 | H17 | 120.0° | 180.0° |
C9 | C8 | C7 | N3 | 1.0° | 0.0° |
C9 | C8 | C7 | N4 | 179.2° | 180.0° |
C9 | C8 | C7 | N5 | 179.5° | 180.0° |
C9 | C8 | N4 | C10 | 179.5° | 179.9° |
C8 | C9 | N7 | H16 | 179.6° | 180.0° |
C8 | C9 | N7 | H17 | 60.4° | 0.0° |
N3 | C7 | C8 | N5 | 179.5° | 180.0° |
N3 | C7 | C8 | N4 | 179.7° | 180.0° |
N3 | C7 | N5 | C5 | 0.7° | 0.1° |
N3 | C7 | N5 | C10 | 179.4° | 179.9° |
C7 | N3 | C6 | H15 | 179.7° | 180.0° |
C7 | C8 | N4 | C10 | 0.4° | 0.1° |
C8 | C7 | N5 | C5 | 180.0° | 179.9° |
C8 | C7 | N5 | C10 | 0.0° | 0.1° |
N4 | C8 | C7 | N5 | 0.2° | 0.0° |
C8 | N4 | C10 | N5 | 0.4° | 0.2° |
C8 | N4 | C10 | H1 | 179.6° | 180.0° |
C7 | N5 | C10 | N4 | 0.3° | 0.2° |
C7 | N5 | C5 | C10 | 180.0° | 180.0° |
C7 | N5 | C5 | O4 | 171.9° | 156.5° |
C7 | N5 | C5 | C4 | 52.4° | 88.2° |
C7 | N5 | C10 | H1 | 179.7° | 180.0° |
C7 | N5 | C5 | H14 | 65.6° | 34.2° |
N4 | C10 | N5 | C5 | 179.7° | 179.8° |
N4 | C10 | N5 | H1 | 180.0° | 179.8° |
N5 | C5 | O4 | C4 | 120.7° | 118.8° |
N5 | C5 | O4 | H14 | 122.4° | 122.3° |
N5 | C5 | C4 | H14 | 118.2° | 122.3° |
N5 | C5 | C4 | O6 | 105.1° | 98.5° |
N5 | C5 | O4 | C2 | 148.3° | 159.4° |
N5 | C5 | C4 | C3 | 132.5° | 142.8° |
C5 | N5 | C10 | H1 | 0.3° | 0.0° |
N5 | C5 | C4 | H12 | 15.1° | 24.1° |
C10 | N5 | C5 | O4 | 8.1° | 23.5° |
C10 | N5 | C5 | C4 | 127.6° | 91.8° |
C10 | N5 | C5 | H14 | 114.4° | 145.8° |
O4 | C5 | C4 | H14 | 117.3° | 118.9° |
O4 | C5 | C4 | O6 | 130.4° | 142.7° |
O4 | C5 | C4 | C3 | 8.0° | 24.0° |
C5 | O4 | C2 | C3 | 36.0° | 40.6° |
C5 | O4 | C2 | C1 | 153.2° | 159.4° |
C5 | O4 | C2 | H9 | 82.2° | 78.4° |
O4 | C5 | C4 | H12 | 109.4° | 94.7° |
C5 | C4 | O6 | C3 | 116.2° | 114.7° |
C5 | C4 | O6 | H12 | 119.3° | 122.7° |
C4 | C5 | O4 | C2 | 27.6° | 40.5° |
C5 | C4 | C3 | H12 | 117.7° | 118.7° |
C5 | C4 | C3 | C2 | 13.2° | 0.0° |
C5 | C4 | C3 | O5 | 133.5° | 118.6° |
C5 | C4 | C3 | H10 | 103.1° | 118.7° |
C5 | C4 | O6 | H13 | 180.0° | 176.2° |
O6 | C4 | C3 | H12 | 125.4° | 122.6° |
O6 | C4 | C3 | C2 | 103.6° | 118.8° |
O6 | C4 | C3 | O5 | 16.7° | 0.2° |
O6 | C4 | C3 | H10 | 140.0° | 122.5° |
O6 | C4 | C5 | H14 | 13.1° | 23.8° |
O4 | C2 | C3 | C4 | 29.9° | 24.0° |
O4 | C2 | C3 | C1 | 121.8° | 118.8° |
O4 | C2 | C3 | H9 | 118.8° | 119.0° |
O4 | C2 | C1 | H9 | 125.1° | 122.3° |
O4 | C2 | C1 | O3 | 50.7° | 69.6° |
O4 | C2 | C3 | O5 | 152.8° | 142.6° |
O4 | C2 | C1 | H7 | 170.7° | 50.4° |
O4 | C2 | C1 | H8 | 69.4° | 170.4° |
O4 | C2 | C3 | H10 | 86.3° | 94.8° |
C2 | O4 | C5 | H14 | 89.3° | 78.3° |
C4 | C3 | C2 | O5 | 122.9° | 118.6° |
C4 | C3 | C2 | H10 | 116.1° | 118.8° |
C4 | C3 | C2 | C1 | 151.7° | 142.8° |
C4 | C3 | O5 | H10 | 122.6° | 122.8° |
C4 | C3 | C2 | H9 | 89.0° | 95.0° |
C4 | C3 | O5 | H11 | 180.0° | 65.4° |
C3 | C4 | O6 | H13 | 63.8° | 61.5° |
C3 | C4 | C5 | H14 | 109.3° | 94.9° |
C11 | C12 | N9 | H3 | 180.0° | 179.9° |
C12 | C11 | N6 | H2 | 180.0° | 180.0° |
C11 | C12 | N9 | C13 | 0.3° | 0.1° |
C12 | C11 | N6 | P1 | 179.5° | 180.0° |
C12 | C11 | N6 | C13 | 0.6° | 0.2° |
N9 | C12 | C11 | N6 | 0.6° | 0.0° |
C12 | N9 | C13 | N6 | 0.1° | 0.3° |
C12 | N9 | C13 | N8 | 179.6° | 180.0° |
N9 | C12 | C11 | H2 | 179.4° | 180.0° |
C11 | N6 | P1 | O3 | 108.7° | 30.0° |
C11 | N6 | P1 | O1 | 12.5° | 150.0° |
C11 | N6 | C13 | N9 | 0.4° | 0.3° |
C11 | N6 | P1 | C13 | 178.6° | 179.8° |
C11 | N6 | P1 | O2 | 139.5° | 90.0° |
C11 | N6 | C13 | N8 | 179.9° | 180.0° |
N6 | C11 | C12 | H3 | 179.5° | 180.0° |
C3 | C2 | C1 | H9 | 119.4° | 122.3° |
C3 | C2 | C1 | O3 | 166.1° | 175.0° |
C2 | C3 | O5 | H10 | 120.3° | 122.6° |
C3 | C2 | C1 | H7 | 73.8° | 65.0° |
C3 | C2 | C1 | H8 | 46.0° | 55.0° |
C2 | C3 | O5 | H11 | 63.0° | 180.0° |
C2 | C3 | C4 | H12 | 130.9° | 118.7° |
C2 | C1 | O3 | H7 | 120.1° | 120.0° |
C2 | C1 | O3 | H8 | 120.1° | 120.1° |
C2 | C1 | O3 | P1 | 121.5° | 180.0° |
C1 | C2 | C3 | O5 | 85.4° | 98.6° |
C2 | C1 | H7 | H8 | 119.8° | 120.0° |
C1 | C2 | C3 | H10 | 35.5° | 24.0° |
C1 | O3 | P1 | O1 | 162.4° | 55.0° |
C1 | O3 | P1 | N6 | 67.3° | 175.0° |
C1 | O3 | P1 | O2 | 51.3° | 65.1° |
O3 | C1 | H7 | H8 | 119.7° | 120.0° |
O3 | C1 | C2 | H9 | 74.5° | 52.7° |
O3 | P1 | O1 | N6 | 125.4° | 119.9° |
O3 | P1 | O1 | O2 | 105.7° | 120.0° |
O3 | P1 | N6 | O2 | 111.8° | 120.0° |
O3 | P1 | N6 | C13 | 72.7° | 149.8° |
O3 | P1 | O2 | H6 | 107.8° | 60.0° |
P1 | O3 | C1 | H7 | 118.4° | 60.0° |
P1 | O3 | C1 | H8 | 1.4° | 59.9° |
O5 | C3 | C2 | H9 | 33.9° | 23.6° |
O5 | C3 | C4 | H12 | 108.8° | 122.7° |
O1 | P1 | N6 | O2 | 127.0° | 120.0° |
O1 | P1 | N6 | C13 | 166.0° | 29.8° |
O1 | P1 | O2 | H6 | 0.0° | 180.0° |
N9 | C13 | N6 | P1 | 179.1° | 179.9° |
N9 | C13 | N6 | N8 | 179.5° | 179.7° |
C13 | N9 | C12 | H3 | 179.7° | 179.8° |
N9 | C13 | N8 | H4 | 0.0° | 0.1° |
N9 | C13 | N8 | H5 | 120.0° | 179.9° |
P1 | N6 | C13 | N8 | 1.3° | 0.2° |
P1 | N6 | C11 | H2 | 0.5° | 0.0° |
N6 | P1 | O2 | H6 | 133.4° | 60.0° |
C13 | N6 | P1 | O2 | 39.0° | 90.2° |
C13 | N6 | C11 | H2 | 179.4° | 179.8° |
N6 | C13 | N8 | H4 | 179.4° | 179.7° |
N6 | C13 | N8 | H5 | 60.5° | 0.3° |
C13 | N8 | H4 | H5 | 120.0° | 180.0° |
H2 | C11 | C12 | H3 | 0.6° | 0.0° |
H7 | C1 | C2 | H9 | 45.6° | 172.7° |
H8 | C1 | C2 | H9 | 165.4° | 67.3° |
H9 | C2 | C3 | H10 | 154.9° | 146.2° |
H10 | C3 | O5 | H11 | 57.4° | 57.4° |
H10 | C3 | C4 | H12 | 14.6° | 0.0° |
H12 | C4 | O6 | H13 | 60.8° | 61.2° |
H12 | C4 | C5 | H14 | 133.3° | 146.5° |