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LXE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1'C6'sing1.47Å1.49Å
C4'C6'sing1.55Å1.58Å
C4'C5'sing1.53Å1.52Å
C4'C3'sing1.54Å1.51Å
O3'C3'sing1.43Å1.49Å
C6'C1'sing1.55Å1.51Å
C5'O5'sing1.43Å1.41Å
C2'C3'sing1.54Å1.47Å
C2'C1'sing1.54Å1.53Å
C2'O2'sing1.43Å1.38Å
C1'H1'sing1.09Å1.10Å
C1'H1sing1.09Å1.10Å
C2'H2'sing1.09Å1.10Å
O2'HBsing0.97Å0.95Å
C3'H3'sing1.09Å1.10Å
O3'HCsing0.97Å0.95Å
C4'H4'sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
O5'H5'sing0.97Å0.95Å
C6'H6'sing1.09Å1.10Å
N1'HN1'sing1.01Å1.00Å
N1'HN11sing1.01Å1.00Å
N1'HN12sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1'C6'C4'105.6°110.7°
N1'C6'C1'112.5°110.8°
N1'C6'H6'111.7°110.8°
C6'N1'HN1'109.5°109.5°
C6'N1'HN11109.5°109.5°
C6'N1'HN12109.5°109.5°
C6'C4'C5'112.8°110.5°
C6'C4'C3'102.9°104.2°
C4'C6'C1'104.7°102.6°
C6'C4'H4'108.7°110.5°
C4'C6'H6'110.5°110.8°
C5'C4'C3'113.0°110.5°
C4'C5'O5'114.6°109.5°
C5'C4'H4'109.5°110.4°
C4'C5'H5'1108.2°109.5°
C4'C5'H5'2108.2°109.5°
C4'C3'O3'110.7°110.1°
C4'C3'C2'101.1°106.6°
C4'C3'H3'111.5°110.1°
C3'C4'H4'109.6°110.6°
O3'C3'C2'108.9°110.0°
O3'C3'H3'111.9°110.0°
C3'O3'HC109.5°114.0°
C6'C1'C2'100.3°104.3°
C6'C1'H1'111.7°110.5°
C6'C1'H1111.7°110.5°
C1'C6'H6'111.5°110.8°
O5'C5'H5'1108.2°109.4°
O5'C5'H5'2108.2°109.4°
C5'O5'H5'109.5°114.0°
C3'C2'C1'100.5°106.6°
C3'C2'O2'113.7°110.0°
C3'C2'H2'110.0°110.1°
C2'C3'H3'112.2°110.0°
C1'C2'O2'111.8°110.0°
C2'C1'H1'111.7°110.5°
C2'C1'H1111.7°110.5°
C1'C2'H2'109.1°110.0°
O2'C2'H2'111.2°110.1°
C2'O2'HB109.5°114.0°
H1'C1'H1109.5°110.4°
H5'1C5'H5'2109.5°109.5°
HN1'N1'HN11109.5°109.5°
HN1'N1'HN12109.5°109.5°
HN11N1'HN12109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1'C6'C4'C1'118.9°118.3°
N1'C6'C4'H6'121.0°123.4°
N1'C6'C4'C5'115.3°85.1°
N1'C6'C4'C3'122.6°156.2°
N1'C6'C1'H6'126.4°123.5°
N1'C6'C1'C2'86.5°156.2°
N1'C6'C1'H1'155.0°37.4°
N1'C6'C1'H132.0°85.1°
N1'C6'C4'H4'6.4°37.4°
C6'N1'HN1'HN11120.0°120.0°
C6'N1'HN1'HN12120.0°120.0°
C6'N1'HN11HN12120.0°120.0°
C6'C4'C5'C3'116.3°114.8°
C6'C4'C5'H4'121.2°122.6°
C6'C4'C3'H4'115.6°118.8°
C6'C4'C3'O3'150.5°142.9°
C4'C6'C1'H6'119.5°118.3°
C6'C4'C5'O5'63.4°175.0°
C6'C4'C3'C2'35.2°23.7°
C4'C6'C1'C2'27.6°37.9°
C4'C6'C1'H1'90.8°80.8°
C4'C6'C1'H1146.1°156.7°
C6'C4'C3'H3'84.3°95.6°
C6'C4'C5'H5'1175.8°55.0°
C6'C4'C5'H5'257.3°65.0°
C4'C6'N1'HN1'180.0°60.0°
C4'C6'N1'HN1160.0°180.0°
C4'C6'N1'HN1260.0°60.0°
C5'C4'C3'H4'122.5°122.6°
C5'C4'C3'O3'87.6°98.4°
C5'C4'C6'C1'125.8°156.6°
C4'C5'O5'H5'1120.8°120.0°
C4'C5'O5'H5'2120.7°120.0°
C5'C4'C3'C2'157.2°142.3°
C5'C4'C3'H3'37.7°23.0°
C4'C5'H5'1H5'2117.7°120.1°
C4'C5'O5'H5'180.0°180.0°
C5'C4'C6'H6'5.7°38.3°
C4'C3'O3'C2'110.3°117.2°
C4'C3'O3'H3'125.1°121.5°
C3'C4'C6'C1'3.7°38.0°
C3'C4'C5'O5'52.8°70.2°
C4'C3'C2'H3'119.0°119.3°
C4'C3'C2'C1'53.9°0.0°
C4'C3'C2'O2'173.5°119.3°
C4'C3'C2'H2'61.0°119.2°
C4'C3'O3'HC180.0°178.6°
C3'C4'C5'H5'167.9°169.8°
C3'C4'C5'H5'2173.5°49.8°
C3'C4'C6'H6'116.4°80.4°
O3'C3'C2'H3'124.5°121.4°
O3'C3'C2'C1'170.5°119.4°
O3'C3'C2'O2'69.9°121.4°
O3'C3'C2'H2'55.6°0.1°
O3'C3'C4'H4'34.9°24.2°
C6'C1'C2'C3'50.9°23.7°
C6'C1'C2'H1'118.5°118.7°
C6'C1'C2'H1118.5°118.7°
C6'C1'C2'O2'171.9°95.6°
C6'C1'H1'H1124.3°122.5°
C6'C1'C2'H2'64.6°143.0°
C1'C6'C4'H4'112.5°80.9°
C1'C6'N1'HN1'66.4°53.2°
C1'C6'N1'HN11173.6°66.9°
C1'C6'N1'HN1253.6°173.2°
O5'C5'C4'H4'175.3°52.5°
O5'C5'H5'1H5'2117.6°119.9°
C3'C2'C1'O2'121.0°119.2°
C3'C2'C1'H2'115.6°119.3°
C3'C2'O2'H2'124.8°121.4°
C3'C2'C1'H1'67.6°95.1°
C3'C2'C1'H1169.4°142.4°
C3'C2'O2'HB180.0°179.9°
C2'C3'O3'HC69.7°61.4°
C2'C3'C4'H4'80.3°95.1°
C1'C2'O2'H2'122.2°121.4°
C2'C1'H1'H1124.2°122.6°
C1'C2'O2'HB67.0°62.8°
C1'C2'C3'H3'65.1°119.3°
C2'C1'C6'H6'147.1°80.3°
O2'C2'C1'H1'53.4°145.7°
O2'C2'C1'H169.6°23.1°
O2'C2'C3'H3'54.5°0.0°
H1'C1'C2'H2'176.9°24.2°
H1'C1'C6'H6'28.6°160.9°
H1C1'C2'H2'53.9°98.3°
H1C1'C6'H6'94.4°38.4°
H2'C2'O2'HB55.2°58.6°
H2'C2'C3'H3'180.0°121.5°
H3'C3'O3'HC54.9°60.0°
H3'C3'C4'H4'160.2°145.6°
H4'C4'C5'H5'154.6°67.5°
H4'C4'C5'H5'264.0°172.4°
H4'C4'C6'H6'127.4°160.8°
H5'1C5'O5'H5'59.3°60.0°
H5'2C5'O5'H5'59.2°60.0°
H6'C6'N1'HN1'59.8°176.6°
H6'C6'N1'HN1160.2°56.6°
H6'C6'N1'HN12179.8°63.3°
HN1'N1'HN11HN12120.0°120.0°

238582

PDB entries from 2025-07-09

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