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Summary Geometry Related PDB entries

LV7

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O	C1	doub	1.21Å	1.24Å
C	C1	sing	1.51Å	1.51Å
C1	N	sing	1.35Å	1.43Å
N	C2	sing	1.39Å	1.46Å
C2	C3	doub	1.39Å	1.38Å	Aromatic
C2	C7	sing	1.40Å	1.42Å	Aromatic
C3	C4	sing	1.38Å	1.37Å	Aromatic
O1	C8	doub	1.22Å	1.29Å
C8	C7	sing	1.48Å	1.42Å
C8	N1	sing	1.35Å	1.37Å
C7	C6	doub	1.40Å	1.38Å	Aromatic
C4	C5	doub	1.39Å	1.37Å	Aromatic
N1	N2	sing	1.37Å	1.37Å
C5	C6	sing	1.38Å	1.34Å	Aromatic
N1	H1	sing	0.97Å	1.00Å
C4	H2	sing	1.08Å	1.08Å
C5	H3	sing	1.08Å	1.08Å
C6	H4	sing	1.08Å	1.08Å
N	H5	sing	0.97Å	1.00Å
C	H6	sing	1.09Å	1.10Å
C	H7	sing	1.09Å	1.10Å
C	H8	sing	1.09Å	1.10Å
C3	H9	sing	1.08Å	1.08Å
N2	H10	sing	1.01Å	1.00Å
N2	H11	sing	1.01Å	1.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O	C1	C	118.6°	120.0°
O	C1	N	117.5°	120.0°
C	C1	N	123.8°	120.0°
C1	C	H6	109.5°	109.5°
C1	C	H7	109.5°	109.5°
C1	C	H8	109.5°	109.4°
C1	N	C2	130.4°	120.0°
C1	N	H5	114.8°	120.0°
N	C2	C3	125.1°	120.2°
N	C2	C7	117.2°	120.2°
C2	N	H5	114.8°	120.0°
C3	C2	C7	117.4°	119.6°
C2	C3	C4	119.6°	120.1°
C2	C3	H9	120.2°	119.9°
C2	C7	C8	118.3°	120.2°
C2	C7	C6	122.4°	119.6°
C3	C4	C5	120.7°	120.5°
C3	C4	H2	119.6°	119.8°
C4	C3	H9	120.2°	120.0°
O1	C8	C7	123.2°	120.0°
O1	C8	N1	118.7°	120.0°
C7	C8	N1	118.1°	120.0°
C8	C7	C6	119.3°	120.2°
C8	N1	N2	112.5°	120.0°
C8	N1	H1	123.7°	120.0°
C7	C6	C5	117.3°	120.0°
C7	C6	H4	121.4°	120.0°
C4	C5	C6	122.5°	120.3°
C5	C4	H2	119.7°	119.8°
C4	C5	H3	118.8°	119.9°
N2	N1	H1	123.8°	120.0°
N1	N2	H10	109.5°	111.0°
N1	N2	H11	109.5°	111.0°
C6	C5	H3	118.7°	119.8°
C5	C6	H4	121.3°	120.0°
H6	C	H7	109.5°	109.5°
H6	C	H8	109.5°	109.5°
H7	C	H8	109.5°	109.4°
H10	N2	H11	109.5°	111.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O	C1	C	N	177.8°	179.9°
O	C1	N	C2	176.1°	5.4°
O	C1	N	H5	3.9°	174.7°
O	C1	C	H6	0.0°	89.9°
O	C1	C	H7	120.0°	150.0°
O	C1	C	H8	120.0°	30.1°
C	C1	N	C2	1.7°	174.7°
C	C1	N	H5	178.3°	5.2°
C1	C	H6	H7	120.0°	120.0°
C1	C	H6	H8	120.0°	120.0°
C1	C	H7	H8	120.0°	119.9°
C1	N	C2	H5	180.0°	179.9°
C1	N	C2	C3	8.3°	34.9°
C1	N	C2	C7	177.8°	145.6°
N	C1	C	H6	177.8°	90.0°
N	C1	C	H7	57.8°	30.1°
N	C1	C	H8	62.2°	150.0°
N	C2	C3	C7	174.0°	179.5°
N	C2	C3	C4	172.4°	180.0°
N	C2	C7	C8	4.9°	0.2°
N	C2	C7	C6	173.5°	179.7°
N	C2	C3	H9	7.6°	0.0°
C2	C3	C4	H9	180.0°	180.0°
C3	C2	C7	C8	179.3°	179.7°
C3	C2	C7	C6	1.0°	0.2°
C2	C3	C4	C5	0.9°	0.5°
C2	C3	C4	H2	179.1°	179.7°
C3	C2	N	H5	171.7°	145.0°
C7	C2	C3	C4	1.6°	0.5°
C2	C7	C8	O1	5.6°	5.0°
C2	C7	C8	C6	178.4°	180.0°
C2	C7	C8	N1	174.2°	175.0°
C2	C7	C6	C5	0.4°	0.0°
C2	C7	C6	H4	179.6°	179.9°
C7	C2	N	H5	2.2°	34.5°
C7	C2	C3	H9	178.4°	179.5°
C3	C4	C5	H2	180.0°	179.8°
C3	C4	C5	C6	0.6°	0.2°
C3	C4	C5	H3	179.4°	179.8°
O1	C8	C7	N1	179.9°	179.9°
O1	C8	C7	C6	176.0°	175.0°
O1	C8	N1	N2	6.8°	0.0°
O1	C8	N1	H1	173.2°	179.8°
C7	C8	N1	N2	173.3°	180.0°
C8	C7	C6	C5	177.9°	180.0°
C7	C8	N1	H1	6.7°	0.3°
C8	C7	C6	H4	2.1°	0.1°
N1	C8	C7	C6	4.2°	5.0°
C8	N1	N2	H1	180.0°	179.8°
C8	N1	N2	H10	180.0°	179.7°
C8	N1	N2	H11	60.0°	56.3°
C7	C6	C5	C4	1.2°	0.0°
C7	C6	C5	H4	180.0°	179.9°
C7	C6	C5	H3	178.8°	180.0°
C4	C5	C6	H3	180.0°	180.0°
C4	C5	C6	H4	178.8°	179.9°
C5	C4	C3	H9	179.2°	179.5°
N1	N2	H10	H11	120.0°	124.0°
C6	C5	C4	H2	179.4°	180.0°
H1	N1	N2	H10	0.0°	0.1°
H1	N1	N2	H11	120.0°	123.9°
H2	C4	C5	H3	0.6°	0.0°
H2	C4	C3	H9	0.8°	0.3°
H3	C5	C6	H4	1.2°	0.0°
H6	C	H7	H8	120.0°	120.0°

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