Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

LSJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O2sing1.40Å1.39Å
C1C25sing1.51Å1.47Å
O2C3sing1.35Å1.35Å
C3C4doub1.39Å1.38ÅAromatic
C3C8sing1.39Å1.36ÅAromatic
C4C5sing1.39Å1.36ÅAromatic
C4C9sing1.48Å1.43Å
C5C6doub1.38Å1.36ÅAromatic
C6C7sing1.38Å1.36ÅAromatic
C7C8doub1.38Å1.36ÅAromatic
C9C10doub1.36Å1.34Å
C9C24sing1.48Å1.44Å
C10C11sing1.47Å1.43Å
C10C22sing1.51Å1.48Å
C11C12doub1.40Å1.36ÅAromatic
C11C16sing1.40Å1.36ÅAromatic
C12C13sing1.38Å1.36ÅAromatic
C13C14doub1.38Å1.36ÅAromatic
C14C15sing1.39Å1.36ÅAromatic
C15C16doub1.39Å1.36ÅAromatic
C15N17sing1.40Å1.43Å
N17S18sing1.66Å1.66Å
S18O19doub1.42Å1.40Å
S18O20doub1.42Å1.40Å
S18C21sing1.81Å1.71Å
C22C23sing1.53Å1.50Å
C24C25doub1.38Å1.36ÅAromatic
C24C29sing1.41Å1.36ÅAromatic
C25C26sing1.39Å1.36ÅAromatic
C26C27doub1.38Å1.37ÅAromatic
C27C28sing1.38Å1.36ÅAromatic
C28C29doub1.38Å1.36ÅAromatic
C29O30sing1.36Å1.34Å
O30C31sing1.43Å1.38Å
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C12H12sing1.08Å1.08Å
C13H13sing1.08Å1.08Å
C14H14sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
N17HN17sing0.97Å1.00Å
C21H21sing1.09Å1.10Å
C21H21Asing1.09Å1.10Å
C21H21Bsing1.09Å1.10Å
C22H22sing1.09Å1.10Å
C22H22Asing1.09Å1.10Å
C23H23sing1.09Å1.10Å
C23H23Asing1.09Å1.10Å
C23H23Bsing1.09Å1.10Å
C26H26sing1.08Å1.08Å
C27H27sing1.08Å1.08Å
C28H28sing1.08Å1.08Å
C31H31sing1.09Å1.10Å
C31H31Asing1.09Å1.10Å
C31H31Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C1C25113.0°114.9°
C1O2C3114.4°120.8°
O2C1H1108.6°108.4°
O2C1H1A108.6°108.5°
C1C25C24119.4°126.3°
C1C25C26120.9°115.1°
C25C1H1108.6°108.4°
C25C1H1A108.6°108.3°
O2C3C4129.8°119.6°
O2C3C8110.6°120.9°
C4C3C8119.6°119.4°
C3C4C5118.8°120.9°
C3C4C9125.1°117.2°
C3C8C7120.9°119.6°
C3C8H8119.5°120.2°
C5C4C9115.9°121.9°
C4C5C6121.3°119.1°
C4C5H5119.3°120.5°
C4C9C10124.6°119.5°
C4C9C24110.1°121.0°
C5C6C7119.4°120.1°
C6C5H5119.3°120.4°
C5C6H6120.3°119.9°
C6C7C8120.0°120.7°
C7C6H6120.3°120.0°
C6C7H7120.0°119.6°
C8C7H7120.0°119.6°
C7C8H8119.6°120.2°
C10C9C24125.3°119.5°
C9C10C11120.8°120.0°
C9C10C22125.5°120.0°
C9C24C25115.7°123.7°
C9C24C29124.7°116.4°
C11C10C22113.7°120.0°
C10C11C12118.1°120.1°
C10C11C16122.5°120.2°
C10C22C23112.9°109.5°
C10C22H22108.6°109.5°
C10C22H22A108.6°109.5°
C12C11C16119.4°119.7°
C11C12C13120.4°120.0°
C11C12H12119.8°120.0°
C11C16C15120.5°119.7°
C11C16H16119.8°120.1°
C12C13C14120.2°120.3°
C13C12H12119.8°120.0°
C12C13H13119.9°119.9°
C13C14C15119.4°120.3°
C14C13H13119.9°119.9°
C13C14H14120.3°119.9°
C14C15C16120.0°120.1°
C14C15N17121.5°120.0°
C15C14H14120.3°119.9°
C16C15N17118.4°120.0°
C15C16H16119.7°120.1°
C15N17S18121.0°120.0°
C15N17HN17106.5°120.0°
N17S18O19108.2°104.3°
N17S18O20106.7°104.3°
N17S18C21105.0°104.4°
S18N17HN17106.5°120.0°
O19S18O20120.7°121.1°
O19S18C21107.5°110.5°
O20S18C21107.6°110.6°
S18C21H21109.5°109.5°
S18C21H21A109.4°109.4°
S18C21H21B109.5°109.5°
C23C22H22108.6°109.5°
C23C22H22A108.6°109.5°
C22C23H23109.5°109.5°
C22C23H23A109.5°109.5°
C22C23H23B109.4°109.4°
C25C24C29119.6°119.8°
C24C25C26119.7°118.6°
C24C29C28120.4°120.5°
C24C29O30119.2°119.7°
C25C26C27120.7°121.5°
C25C26H26119.6°119.3°
C26C27C28119.1°120.2°
C27C26H26119.6°119.2°
C26C27H27120.5°119.9°
C27C28C29120.4°119.4°
C28C27H27120.4°120.0°
C27C28H28119.8°120.3°
C28C29O30120.4°119.8°
C29C28H28119.8°120.3°
C29O30C31104.2°117.0°
O30C31H31109.5°109.5°
O30C31H31A109.5°109.5°
O30C31H31B109.5°109.5°
H1C1H1A109.5°108.1°
H21C21H21A109.5°109.5°
H21C21H21B109.5°109.5°
H21AC21H21B109.5°109.4°
H22C22H22A109.5°109.5°
H23C23H23A109.5°109.5°
H23C23H23B109.5°109.5°
H23AC23H23B109.5°109.4°
H31C31H31A109.5°109.4°
H31C31H31B109.4°109.5°
H31AC31H31B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C1C25H1120.5°121.5°
O2C1C25H1A120.5°121.4°
C1O2C3C41.3°72.3°
C1O2C3C8179.1°107.4°
O2C1C25C2479.0°11.9°
O2C1C25C26101.6°168.2°
O2C1H1H1A118.4°117.4°
C25C1O2C359.5°70.0°
C1C25C24C91.8°0.3°
C1C25C24C26179.4°179.9°
C1C25C24C29179.0°179.7°
C1C25C26C27179.1°179.9°
C25C1H1H1A118.4°117.2°
C1C25C26H260.9°0.2°
O2C3C4C8177.6°179.7°
O2C3C4C5179.7°178.3°
O2C3C4C94.5°3.2°
O2C3C8C7179.9°178.8°
C3O2C1H161.0°51.4°
C3O2C1H1A180.0°168.6°
O2C3C8H80.1°1.2°
C3C4C5C9175.7°178.5°
C3C4C5C61.6°1.0°
C4C3C8C72.0°0.9°
C3C4C9C10126.7°120.1°
C3C4C9C2453.8°59.8°
C3C4C5H5178.4°179.0°
C4C3C8H8178.0°179.1°
C8C3C4C52.7°1.4°
C8C3C4C9177.9°177.1°
C3C8C7C60.2°0.1°
C3C8C7H8180.0°179.9°
C3C8C7H7179.8°180.0°
C4C5C6H5180.0°179.9°
C4C5C6C70.2°0.1°
C5C4C9C1058.0°58.4°
C5C4C9C24121.6°121.6°
C4C5C6H6179.8°179.9°
C9C4C5C6177.3°177.4°
C4C9C10C24179.5°179.9°
C4C9C10C11177.3°168.2°
C4C9C10C220.4°11.9°
C4C9C24C2565.5°42.5°
C4C9C24C29111.7°137.5°
C9C4C5H52.7°2.5°
C5C6C7H6180.0°180.0°
C5C6C7C80.9°0.5°
C5C6C7H7179.1°179.6°
C6C7C8H7180.0°179.9°
C7C6C5H5179.8°180.0°
C6C7C8H8179.8°180.0°
C8C7C6H6179.1°179.5°
C9C10C11C22178.0°180.0°
C9C10C11C12118.8°53.6°
C9C10C11C1661.4°126.7°
C9C10C22C23126.7°95.3°
C10C9C24C25115.0°137.4°
C10C9C24C2967.9°42.6°
C9C10C22H22112.8°144.6°
C9C10C22H22A6.2°24.6°
C24C9C10C112.2°11.8°
C24C9C10C22179.9°168.2°
C9C24C25C29177.3°180.0°
C9C24C25C26178.8°179.8°
C9C24C29C28177.7°179.9°
C9C24C29O302.0°0.1°
C10C11C12C16179.9°179.7°
C10C11C12C13179.1°180.0°
C10C11C16C15179.2°179.8°
C11C10C22C2355.5°84.6°
C10C11C12H120.9°0.1°
C10C11C16H160.8°0.0°
C11C10C22H2265.1°35.4°
C11C10C22H22A176.0°155.4°
C22C10C11C1259.2°126.5°
C22C10C11C16120.7°53.2°
C10C22C23H22120.5°120.0°
C10C22C23H22A120.5°120.0°
C10C22H22H22A118.4°120.0°
C10C22C23H23180.0°177.4°
C10C22C23H23A60.0°62.6°
C10C22C23H23B60.0°57.4°
C11C12C13H12180.0°179.9°
C11C12C13C140.7°0.1°
C12C11C16C151.0°0.5°
C11C12C13H13179.3°180.0°
C12C11C16H16179.0°179.7°
C16C11C12C131.0°0.3°
C11C16C15C140.5°0.6°
C11C16C15H16180.0°179.8°
C11C16C15N17178.9°179.7°
C16C11C12H12178.9°179.8°
C12C13C14H13180.0°180.0°
C12C13C14C150.3°0.1°
C12C13C14H14179.7°180.0°
C13C14C15H14180.0°179.9°
C13C14C15C160.2°0.3°
C13C14C15N17178.5°180.0°
C14C13C12H12179.3°180.0°
C14C15C16N17178.3°179.7°
C14C15N17S1877.1°45.0°
C15C14C13H13179.7°179.9°
C14C15C16H16179.5°179.7°
C14C15N17HN1744.5°135.1°
C16C15N17S18104.6°134.7°
C16C15C14H14179.8°179.8°
C16C15N17HN17133.8°45.2°
C15N17S18HN17121.6°180.0°
C15N17S18O1975.5°178.9°
C15N17S18O2055.8°51.1°
C15N17S18C21169.9°65.0°
N17C15C14H141.6°0.1°
N17C15C16H161.2°0.0°
N17S18O19O20123.2°116.8°
N17S18O19C21113.0°111.7°
N17S18O20C21112.3°111.7°
N17S18C21H21180.0°60.0°
N17S18C21H21A60.0°180.0°
N17S18C21H21B60.0°60.1°
O19S18O20C21123.8°131.5°
O19S18N17HN17162.9°1.1°
O19S18C21H2164.9°51.6°
O19S18C21H21A175.1°68.4°
O19S18C21H21B55.1°171.7°
O20S18N17HN1765.8°129.0°
O20S18C21H2166.6°171.6°
O20S18C21H21A53.4°68.3°
O20S18C21H21B173.4°51.6°
C21S18N17HN1748.3°114.9°
S18C21H21H21A120.0°120.0°
S18C21H21H21B120.0°120.0°
S18C21H21AH21B120.0°119.9°
C23C22H22H22A118.4°120.0°
C22C23H23H23A120.0°120.0°
C22C23H23H23B120.0°120.0°
C22C23H23AH23B120.0°120.0°
C24C25C26C271.5°0.1°
C25C24C29C280.6°0.1°
C25C24C29O30179.0°179.9°
C24C25C1H141.5°109.6°
C24C25C1H1A160.5°133.3°
C24C25C26H26178.6°179.9°
C29C24C25C261.5°0.2°
C24C29C28C270.3°0.0°
C24C29C28O30179.6°180.0°
C24C29O30C31170.7°180.0°
C24C29C28H28179.7°180.0°
C25C26C27H26180.0°179.9°
C25C26C27C280.5°0.1°
C26C25C1H1137.9°70.3°
C26C25C1H1A18.9°46.8°
C25C26C27H27179.5°179.9°
C26C27C28H27180.0°179.9°
C26C27C28C290.4°0.2°
C26C27C28H28179.6°179.8°
C27C28C29H28180.0°180.0°
C27C28C29O30179.9°179.9°
C28C27C26H26179.5°180.0°
C28C29O30C319.7°0.0°
C29C28C27H27179.6°179.9°
O30C29C28H280.0°0.1°
C29O30C31H31180.0°60.0°
C29O30C31H31A60.0°60.0°
C29O30C31H31B60.0°180.0°
O30C31H31H31A120.0°120.0°
O30C31H31H31B120.0°120.0°
O30C31H31AH31B120.0°120.0°
H5C5C6H60.2°0.0°
H6C6C7H70.9°0.4°
H7C7C8H80.2°0.1°
H12C12C13H130.7°0.0°
H13C13C14H140.3°0.0°
H21C21H21AH21B120.0°120.0°
H22C22C23H2359.5°57.4°
H22C22C23H23A179.5°177.4°
H22C22C23H23B60.5°62.6°
H22AC22C23H2359.5°62.6°
H22AC22C23H23A60.5°57.4°
H22AC22C23H23B179.5°177.4°
H23C23H23AH23B120.0°120.0°
H26C26C27H270.5°0.0°
H27C27C28H280.4°0.1°
H31C31H31AH31B119.9°120.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon