LRT
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | S | doub | 1.42Å | 1.43Å | |
C5 | C6 | sing | 1.47Å | 1.51Å | |
C5 | N2 | sing | 1.50Å | 1.48Å | |
C6 | C7 | sing | 1.52Å | 1.51Å | |
C10 | C11 | doub | 1.39Å | 1.38Å | Aromatic |
C10 | C4 | sing | 1.36Å | 1.37Å | Aromatic |
S | C4 | sing | 1.76Å | 1.77Å | |
S | N2 | sing | 1.66Å | 1.63Å | |
S | O1 | doub | 1.42Å | 1.43Å | |
C11 | C12 | sing | 1.36Å | 1.36Å | Aromatic |
C4 | C3 | doub | 1.40Å | 1.43Å | Aromatic |
N2 | C9 | sing | 1.44Å | 1.48Å | |
C7 | N3 | sing | 1.44Å | 1.48Å | |
C12 | C13 | doub | 1.40Å | 1.42Å | Aromatic |
C3 | C13 | sing | 1.42Å | 1.43Å | Aromatic |
C3 | C2 | sing | 1.41Å | 1.42Å | Aromatic |
C13 | C | sing | 1.41Å | 1.45Å | Aromatic |
C2 | C1 | doub | 1.36Å | 1.36Å | Aromatic |
C | N | sing | 1.38Å | 1.34Å | |
C | N1 | doub | 1.32Å | 1.37Å | Aromatic |
C1 | N1 | sing | 1.33Å | 1.35Å | Aromatic |
C9 | C8 | sing | 1.55Å | 1.52Å | |
N3 | C8 | sing | 1.49Å | 1.48Å | |
N | H1 | sing | 0.97Å | 1.00Å | |
N | H2 | sing | 0.97Å | 1.00Å | |
C1 | H3 | sing | 1.08Å | 1.08Å | |
C10 | H4 | sing | 1.08Å | 1.08Å | |
C11 | H5 | sing | 1.08Å | 1.08Å | |
C12 | H6 | sing | 1.08Å | 1.08Å | |
C2 | H7 | sing | 1.08Å | 1.08Å | |
C5 | H8 | sing | 1.09Å | 1.10Å | |
C5 | H9 | sing | 1.09Å | 1.10Å | |
C6 | H10 | sing | 1.09Å | 1.10Å | |
C6 | H11 | sing | 1.09Å | 1.10Å | |
C7 | H12 | sing | 1.09Å | 1.10Å | |
C7 | H13 | sing | 1.09Å | 1.10Å | |
C8 | H14 | sing | 1.09Å | 1.10Å | |
C8 | H15 | sing | 1.09Å | 1.10Å | |
C9 | H16 | sing | 1.09Å | 1.10Å | |
C9 | H17 | sing | 1.09Å | 1.10Å | |
N3 | H18 | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | S | C4 | 108.6° | 106.4° |
O | S | N2 | 106.5° | 106.4° |
O | S | O1 | 119.9° | 123.2° |
C6 | C5 | N2 | 115.1° | 107.0° |
C5 | C6 | C7 | 112.9° | 114.2° |
C6 | C5 | H8 | 108.0° | 110.0° |
C6 | C5 | H9 | 108.1° | 109.9° |
C5 | C6 | H10 | 108.6° | 108.6° |
C5 | C6 | H11 | 108.6° | 108.5° |
C5 | N2 | S | 113.5° | 120.6° |
C5 | N2 | C9 | 120.3° | 118.9° |
N2 | C5 | H8 | 108.1° | 110.0° |
N2 | C5 | H9 | 108.1° | 109.9° |
C6 | C7 | N3 | 109.4° | 105.4° |
C7 | C6 | H10 | 108.6° | 108.6° |
C7 | C6 | H11 | 108.6° | 108.5° |
C6 | C7 | H12 | 109.5° | 110.2° |
C6 | C7 | H13 | 109.5° | 110.3° |
C11 | C10 | C4 | 120.6° | 121.0° |
C10 | C11 | C12 | 120.9° | 121.0° |
C11 | C10 | H4 | 119.7° | 119.5° |
C10 | C11 | H5 | 119.6° | 119.5° |
C10 | C4 | S | 116.0° | 120.3° |
C10 | C4 | C3 | 120.8° | 119.5° |
C4 | C10 | H4 | 119.7° | 119.5° |
C4 | S | N2 | 104.0° | 107.2° |
C4 | S | O1 | 109.6° | 106.4° |
S | C4 | C3 | 123.3° | 120.3° |
N2 | S | O1 | 106.9° | 106.4° |
S | N2 | C9 | 120.0° | 120.5° |
C11 | C12 | C13 | 121.1° | 119.6° |
C12 | C11 | H5 | 119.5° | 119.5° |
C11 | C12 | H6 | 119.4° | 120.2° |
C4 | C3 | C13 | 118.1° | 119.5° |
C4 | C3 | C2 | 123.7° | 122.1° |
N2 | C9 | C8 | 110.3° | 116.2° |
N2 | C9 | H16 | 109.3° | 108.2° |
N2 | C9 | H17 | 109.2° | 108.0° |
C7 | N3 | C8 | 115.7° | 112.1° |
N3 | C7 | H12 | 109.5° | 110.2° |
N3 | C7 | H13 | 109.5° | 110.2° |
C7 | N3 | H18 | 107.9° | 111.0° |
C12 | C13 | C3 | 118.6° | 119.4° |
C12 | C13 | C | 123.7° | 122.1° |
C13 | C12 | H6 | 119.5° | 120.2° |
C13 | C3 | C2 | 118.2° | 118.3° |
C3 | C13 | C | 117.6° | 118.5° |
C3 | C2 | C1 | 119.7° | 118.8° |
C3 | C2 | H7 | 120.2° | 120.6° |
C13 | C | N | 120.9° | 120.1° |
C13 | C | N1 | 121.7° | 119.7° |
C2 | C1 | N1 | 124.4° | 122.0° |
C2 | C1 | H3 | 117.8° | 119.0° |
C1 | C2 | H7 | 120.2° | 120.6° |
N | C | N1 | 117.4° | 120.1° |
C | N | H1 | 109.5° | 120.0° |
C | N | H2 | 109.5° | 120.0° |
C | N1 | C1 | 118.5° | 122.7° |
N1 | C1 | H3 | 117.8° | 119.0° |
C9 | C8 | N3 | 108.0° | 110.6° |
C9 | C8 | H14 | 109.9° | 109.2° |
C9 | C8 | H15 | 109.8° | 109.3° |
C8 | C9 | H16 | 109.3° | 108.1° |
C8 | C9 | H17 | 109.3° | 108.1° |
N3 | C8 | H14 | 109.8° | 109.2° |
N3 | C8 | H15 | 109.8° | 109.2° |
C8 | N3 | H18 | 107.9° | 111.0° |
H1 | N | H2 | 109.5° | 120.0° |
H8 | C5 | H9 | 109.5° | 110.0° |
H10 | C6 | H11 | 109.5° | 108.3° |
H12 | C7 | H13 | 109.5° | 110.4° |
H14 | C8 | H15 | 109.5° | 109.3° |
H16 | C9 | H17 | 109.5° | 108.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | S | N2 | C5 | 11.6° | 19.7° |
O | S | C4 | C10 | 83.8° | 99.2° |
O | S | C4 | N2 | 113.2° | 113.5° |
O | S | C4 | O1 | 132.7° | 132.9° |
O | S | N2 | O1 | 129.4° | 132.9° |
O | S | C4 | C3 | 97.2° | 80.9° |
O | S | N2 | C9 | 164.1° | 160.4° |
C6 | C5 | N2 | H8 | 120.8° | 119.4° |
C6 | C5 | N2 | H9 | 120.8° | 119.3° |
C5 | C6 | C7 | H10 | 120.5° | 121.3° |
C5 | C6 | C7 | H11 | 120.5° | 121.2° |
C6 | C5 | N2 | S | 112.9° | 111.5° |
C6 | C5 | N2 | C9 | 39.5° | 68.5° |
C5 | C6 | C7 | N3 | 72.1° | 90.3° |
C6 | C5 | H8 | H9 | 117.4° | 121.2° |
C5 | C6 | H10 | H11 | 118.5° | 117.7° |
C5 | C6 | C7 | H12 | 47.9° | 28.6° |
C5 | C6 | C7 | H13 | 167.9° | 150.7° |
N2 | C5 | C6 | C7 | 85.4° | 58.1° |
C5 | N2 | S | C4 | 126.2° | 93.8° |
C5 | N2 | S | C9 | 152.5° | 180.0° |
C5 | N2 | S | O1 | 117.8° | 152.6° |
C5 | N2 | C9 | C8 | 36.3° | 89.2° |
N2 | C5 | H8 | H9 | 117.4° | 121.2° |
N2 | C5 | C6 | H10 | 154.1° | 179.4° |
N2 | C5 | C6 | H11 | 35.1° | 63.1° |
C5 | N2 | C9 | H16 | 83.9° | 32.6° |
C5 | N2 | C9 | H17 | 156.4° | 149.2° |
C6 | C7 | N3 | H12 | 120.0° | 118.9° |
C6 | C7 | N3 | H13 | 120.0° | 119.0° |
C6 | C7 | N3 | C8 | 65.2° | 98.7° |
C7 | C6 | C5 | H8 | 153.8° | 177.5° |
C7 | C6 | C5 | H9 | 35.4° | 61.2° |
C7 | C6 | H10 | H11 | 118.4° | 117.7° |
C6 | C7 | H12 | H13 | 120.0° | 122.1° |
C6 | C7 | N3 | H18 | 173.9° | 136.6° |
C11 | C10 | C4 | H4 | 180.0° | 179.9° |
C11 | C10 | C4 | S | 178.9° | 180.0° |
C10 | C11 | C12 | H5 | 180.0° | 180.0° |
C11 | C10 | C4 | C3 | 0.1° | 0.1° |
C10 | C11 | C12 | C13 | 0.2° | 0.0° |
C10 | C11 | C12 | H6 | 179.8° | 180.0° |
C10 | C4 | S | C3 | 179.0° | 179.9° |
C10 | C4 | S | N2 | 29.3° | 14.3° |
C10 | C4 | S | O1 | 143.4° | 127.9° |
C4 | C10 | C11 | C12 | 0.1° | 0.1° |
C10 | C4 | C3 | C13 | 0.3° | 0.1° |
C10 | C4 | C3 | C2 | 178.6° | 180.0° |
C4 | C10 | C11 | H5 | 179.9° | 180.0° |
C4 | S | N2 | O1 | 116.0° | 113.6° |
C4 | S | N2 | C9 | 81.3° | 86.1° |
S | C4 | C3 | C13 | 178.6° | 180.0° |
S | C4 | C3 | C2 | 0.3° | 0.1° |
S | C4 | C10 | H4 | 1.1° | 0.1° |
N2 | S | C4 | C3 | 149.6° | 165.6° |
S | N2 | C9 | C8 | 173.1° | 90.8° |
S | N2 | C5 | H8 | 7.9° | 7.9° |
S | N2 | C5 | H9 | 126.2° | 129.2° |
S | N2 | C9 | H16 | 66.8° | 147.4° |
S | N2 | C9 | H17 | 53.0° | 30.8° |
O1 | S | C4 | C3 | 35.5° | 52.0° |
O1 | S | N2 | C9 | 34.7° | 27.4° |
C11 | C12 | C13 | H6 | 180.0° | 180.0° |
C11 | C12 | C13 | C3 | 0.5° | 0.0° |
C11 | C12 | C13 | C | 177.5° | 180.0° |
C12 | C11 | C10 | H4 | 179.9° | 180.0° |
C4 | C3 | C13 | C12 | 0.5° | 0.0° |
C4 | C3 | C13 | C2 | 178.4° | 180.0° |
C4 | C3 | C13 | C | 177.6° | 180.0° |
C4 | C3 | C2 | C1 | 177.3° | 179.7° |
C3 | C4 | C10 | H4 | 179.9° | 180.0° |
C4 | C3 | C2 | H7 | 2.7° | 0.0° |
N2 | C9 | C8 | H16 | 120.1° | 121.8° |
N2 | C9 | C8 | H17 | 120.1° | 121.5° |
N2 | C9 | C8 | N3 | 88.8° | 41.7° |
C9 | N2 | C5 | H8 | 160.3° | 172.1° |
C9 | N2 | C5 | H9 | 81.4° | 50.8° |
N2 | C9 | C8 | H14 | 151.5° | 78.5° |
N2 | C9 | C8 | H15 | 31.0° | 161.9° |
N2 | C9 | H16 | H17 | 119.6° | 116.7° |
C7 | N3 | C8 | C9 | 86.7° | 39.0° |
C7 | N3 | C8 | H18 | 120.9° | 124.7° |
N3 | C7 | C6 | H10 | 167.4° | 148.4° |
N3 | C7 | C6 | H11 | 48.4° | 30.9° |
N3 | C7 | H12 | H13 | 120.0° | 122.0° |
C7 | N3 | C8 | H14 | 153.5° | 159.3° |
C7 | N3 | C8 | H15 | 33.0° | 81.3° |
C12 | C13 | C3 | C | 178.1° | 180.0° |
C12 | C13 | C3 | C2 | 178.8° | 180.0° |
C12 | C13 | C | N | 0.9° | 0.0° |
C12 | C13 | C | N1 | 177.9° | 179.7° |
C13 | C12 | C11 | H5 | 179.8° | 180.0° |
C13 | C3 | C2 | C1 | 0.9° | 0.3° |
C3 | C13 | C | N | 178.9° | 180.0° |
C3 | C13 | C | N1 | 0.1° | 0.3° |
C3 | C13 | C12 | H6 | 179.5° | 180.0° |
C13 | C3 | C2 | H7 | 179.1° | 180.0° |
C2 | C3 | C13 | C | 0.7° | 0.0° |
C3 | C2 | C1 | H7 | 180.0° | 179.7° |
C3 | C2 | C1 | N1 | 0.3° | 0.3° |
C3 | C2 | C1 | H3 | 179.7° | 179.8° |
C13 | C | N | N1 | 178.9° | 179.7° |
C13 | C | N1 | C1 | 0.7° | 0.2° |
C13 | C | N | H1 | 178.9° | 179.8° |
C13 | C | N | H2 | 61.0° | 0.3° |
C | C13 | C12 | H6 | 2.5° | 0.0° |
C2 | C1 | N1 | C | 0.5° | 0.1° |
C2 | C1 | N1 | H3 | 180.0° | 179.9° |
N | C | N1 | C1 | 179.6° | 179.9° |
C | N | H1 | H2 | 120.0° | 179.9° |
N1 | C | N | H1 | 0.0° | 0.1° |
N1 | C | N | H2 | 120.0° | 180.0° |
C | N1 | C1 | H3 | 179.5° | 180.0° |
N1 | C1 | C2 | H7 | 179.7° | 180.0° |
C9 | C8 | N3 | H14 | 119.8° | 120.3° |
C9 | C8 | N3 | H15 | 119.8° | 120.3° |
C9 | C8 | H14 | H15 | 120.7° | 119.5° |
C8 | C9 | H16 | H17 | 119.6° | 116.7° |
C9 | C8 | N3 | H18 | 152.4° | 163.7° |
C8 | N3 | C7 | H12 | 54.8° | 20.2° |
C8 | N3 | C7 | H13 | 174.8° | 142.3° |
N3 | C8 | H14 | H15 | 120.7° | 119.4° |
N3 | C8 | C9 | H16 | 31.4° | 80.1° |
N3 | C8 | C9 | H17 | 151.1° | 163.3° |
H3 | C1 | C2 | H7 | 0.3° | 0.0° |
H4 | C10 | C11 | H5 | 0.1° | 0.0° |
H5 | C11 | C12 | H6 | 0.2° | 0.0° |
H8 | C5 | C6 | H10 | 33.3° | 61.2° |
H8 | C5 | C6 | H11 | 85.7° | 56.4° |
H9 | C5 | C6 | H10 | 85.1° | 60.1° |
H9 | C5 | C6 | H11 | 156.0° | 177.6° |
H10 | C6 | C7 | H12 | 72.6° | 92.6° |
H10 | C6 | C7 | H13 | 47.4° | 29.5° |
H11 | C6 | C7 | H12 | 168.4° | 149.8° |
H11 | C6 | C7 | H13 | 71.6° | 88.1° |
H12 | C7 | N3 | H18 | 66.2° | 104.5° |
H13 | C7 | N3 | H18 | 53.8° | 17.6° |
H14 | C8 | C9 | H16 | 88.3° | 159.7° |
H14 | C8 | C9 | H17 | 31.4° | 43.0° |
H14 | C8 | N3 | H18 | 32.6° | 76.0° |
H15 | C8 | C9 | H16 | 151.1° | 40.1° |
H15 | C8 | C9 | H17 | 89.1° | 76.5° |
H15 | C8 | N3 | H18 | 87.9° | 43.4° |