Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

LPK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O6C6sing1.43Å1.42Å
C6C5sing1.53Å1.52Å
O5C5sing1.43Å1.42Å
O4C4sing1.43Å1.42Å
C5C4sing1.53Å1.52Å
C4C3sing1.53Å1.52Å
O2C2doub1.21Å1.23Å
C3C2sing1.51Å1.51Å
C3O3sing1.43Å1.42Å
C2C1sing1.51Å1.51Å
O1C1sing1.43Å1.42Å
C1H11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
O1HO1sing0.97Å0.95Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C4H4sing1.09Å1.10Å
O4HO4sing0.97Å0.95Å
C5H5sing1.09Å1.10Å
O5HO5sing0.97Å0.95Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
O6HO6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O6C6C5111.0°109.5°
O6C6H61109.1°109.5°
O6C6H62109.1°109.5°
C6O6HO6109.5°114.0°
C6C5O5109.7°109.5°
C6C5C4112.4°109.4°
C6C5H5108.0°109.5°
C5C6H61109.1°109.5°
C5C6H62109.1°109.5°
O5C5C4109.6°109.5°
O5C5H5109.2°109.5°
C5O5HO5109.5°114.0°
O4C4C5109.8°109.5°
O4C4C3109.6°109.4°
O4C4H4109.8°109.5°
C4O4HO4109.5°114.0°
C5C4C3110.9°109.5°
C5C4H4108.4°109.4°
C4C5H5107.9°109.4°
C4C3C2108.7°109.4°
C4C3O3109.9°109.5°
C4C3H3109.1°109.5°
C3C4H4108.4°109.5°
O2C2C3118.9°120.0°
O2C2C1119.4°120.0°
C2C3O3109.3°109.5°
C3C2C1119.2°120.0°
C2C3H3109.3°109.5°
O3C3H3110.5°109.5°
C3O3HO3109.5°114.0°
C2C1O1109.4°109.5°
C2C1H11109.5°109.5°
C2C1H12109.5°109.5°
O1C1H11109.5°109.5°
O1C1H12109.5°109.4°
C1O1HO1109.5°114.0°
H11C1H12109.5°109.5°
H61C6H62109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O6C6C5H61120.3°120.0°
O6C6C5H62120.2°120.0°
O6C6C5O535.5°65.0°
O6C6C5C486.6°175.0°
O6C6C5H5154.5°55.0°
O6C6H61H62119.3°120.0°
C6C5O5C4123.8°120.0°
C6C5O5H5118.2°120.0°
C6C5C4O416.4°60.0°
C6C5C4H5118.9°120.0°
C6C5C4C3137.6°180.0°
C6C5C4H4103.5°60.1°
C6C5O5HO5180.0°60.0°
C5C6H61H62119.3°120.0°
C5C6O6HO6180.0°180.0°
O5C5C4O4138.7°179.9°
O5C5C4H5118.8°120.0°
O5C5C4C3100.2°60.0°
O5C5C4H418.7°60.0°
O5C5C6H6184.8°55.0°
O5C5C6H62155.7°175.0°
O4C4C5C3121.2°120.0°
O4C4C5H4119.9°120.0°
O4C4C3H4119.8°120.0°
O4C4C3C237.0°60.0°
O4C4C3O3156.6°180.0°
O4C4C3H382.1°60.0°
O4C4C5H5102.5°60.0°
C5C4C3H4118.9°120.0°
C5C4C3C2158.3°180.0°
C5C4C3O382.1°60.0°
C5C4C3H339.3°60.0°
C5C4O4HO4168.7°60.0°
C4C5O5HO556.2°60.0°
C4C5C6H61153.1°65.0°
C4C5C6H6233.6°55.0°
C4C3C2O247.2°105.0°
C4C3C2O3120.0°120.0°
C4C3C2H3119.0°120.0°
C4C3O3H3120.5°120.0°
C4C3C2C1115.0°75.0°
C4C3O3HO393.1°60.0°
C3C4O4HO446.7°60.0°
C3C4C5H518.7°60.0°
O2C2C3C1162.2°180.0°
O2C2C3O372.7°15.0°
O2C2C1O10.8°0.0°
O2C2C1H11120.7°120.0°
O2C2C1H12119.2°120.0°
O2C2C3H3166.2°135.0°
C2C3O3H3120.3°120.0°
C3C2C1O1162.9°180.0°
C3C2C1H1177.2°60.0°
C3C2C1H1242.9°60.0°
C2C3O3HO326.2°60.0°
C2C3C4H482.8°60.0°
O3C3C2C1125.1°165.0°
O3C3C4H436.8°60.0°
C2C1O1H11120.0°120.0°
C2C1O1H12120.0°120.0°
C2C1H11H12120.1°120.0°
C2C1O1HO10.4°180.0°
C1C2C3H34.0°45.0°
O1C1H11H12120.0°120.0°
H11C1O1HO1120.4°60.0°
H12C1O1HO1119.6°60.0°
H3C3O3HO3146.4°180.0°
H3C3C4H4158.2°NaN°
H4C4O4HO472.2°180.0°
H4C4C5H5137.6°180.0°
H5C5O5HO561.8°180.0°
H5C5C6H6134.2°175.0°
H5C5C6H6285.3°65.0°
H61C6O6HO659.8°60.0°
H62C6O6HO659.7°60.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon