LMZ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | sing | 1.34Å | 1.39Å | Aromatic |
N1 | C6 | sing | 1.36Å | 1.39Å | Aromatic |
N1 | HN1 | sing | 0.97Å | 1.02Å | |
C2 | N3 | sing | 1.34Å | 1.36Å | Aromatic |
C2 | O2 | doub | 1.21Å | 1.39Å | |
N3 | C4 | sing | 1.35Å | 1.37Å | Aromatic |
N3 | HN3 | sing | 0.97Å | 1.02Å | |
C4 | C5 | sing | 1.48Å | 1.51Å | Aromatic |
C4 | O4 | doub | 1.22Å | 1.38Å | |
C5 | C6 | doub | 1.42Å | 1.43Å | Aromatic |
C5 | N5 | sing | 1.32Å | 1.44Å | |
C6 | N7 | sing | 1.35Å | 1.37Å | |
N7 | C8 | sing | 1.46Å | 1.50Å | |
N7 | HN7 | sing | 0.97Å | 1.02Å | |
C8 | C9 | sing | 1.53Å | 1.58Å | |
C8 | H81 | sing | 1.09Å | 1.12Å | |
C8 | H82 | sing | 1.09Å | 1.11Å | |
C9 | O9 | sing | 1.43Å | 1.40Å | |
C9 | C10 | sing | 1.53Å | 1.59Å | |
C9 | H9 | sing | 1.09Å | 1.12Å | |
O9 | HO9 | sing | 0.97Å | 0.95Å | |
C10 | O10 | sing | 1.43Å | 1.41Å | |
C10 | C11 | sing | 1.53Å | 1.65Å | |
C10 | H10 | sing | 1.09Å | 1.12Å | |
O10 | HO10 | sing | 0.97Å | 0.95Å | |
C11 | O11 | sing | 1.43Å | 1.44Å | |
C11 | C12 | sing | 1.53Å | 1.59Å | |
C11 | H11 | sing | 1.09Å | 1.11Å | |
O11 | HO11 | sing | 0.97Å | 0.95Å | |
C12 | O12 | sing | 1.43Å | 1.41Å | |
C12 | H121 | sing | 1.09Å | 1.12Å | |
C12 | H122 | sing | 1.09Å | 1.11Å | |
O12 | HO12 | sing | 0.97Å | 0.95Å | |
N5 | O52 | doub | 1.22Å | 1.24Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C6 | 125.9° | 121.5° |
C2 | N1 | HN1 | 106.4° | 119.3° |
N1 | C2 | N3 | 116.2° | 122.8° |
N1 | C2 | O2 | 116.9° | 118.6° |
C6 | N1 | HN1 | 106.5° | 119.2° |
N1 | C6 | C5 | 117.5° | 118.6° |
N1 | C6 | N7 | 116.7° | 120.6° |
N3 | C2 | O2 | 126.9° | 118.6° |
C2 | N3 | C4 | 125.4° | 121.0° |
C2 | N3 | HN3 | 116.7° | 119.5° |
C4 | N3 | HN3 | 117.9° | 119.5° |
N3 | C4 | C5 | 117.3° | 118.4° |
N3 | C4 | O4 | 114.4° | 120.8° |
C5 | C4 | O4 | 128.3° | 120.8° |
C4 | C5 | C6 | 117.6° | 117.6° |
C4 | C5 | N5 | 116.8° | 121.2° |
C6 | C5 | N5 | 125.5° | 121.2° |
C5 | C6 | N7 | 125.8° | 120.8° |
C5 | N5 | O52 | 119.6° | 120.0° |
C6 | N7 | C8 | 111.6° | 120.0° |
C6 | N7 | HN7 | 111.4° | 119.9° |
C8 | N7 | HN7 | 111.4° | 120.0° |
N7 | C8 | C9 | 113.9° | 109.5° |
N7 | C8 | H81 | 110.6° | 109.4° |
N7 | C8 | H82 | 110.6° | 109.5° |
C9 | C8 | H81 | 110.6° | 109.4° |
C9 | C8 | H82 | 110.6° | 109.5° |
C8 | C9 | O9 | 106.8° | 109.5° |
C8 | C9 | C10 | 126.3° | 109.5° |
C8 | C9 | H9 | 98.8° | 109.4° |
H81 | C8 | H82 | 99.7° | 109.5° |
O9 | C9 | C10 | 108.1° | 109.5° |
O9 | C9 | H9 | 120.6° | 109.4° |
C9 | O9 | HO9 | 106.9° | 106.8° |
C10 | C9 | H9 | 97.1° | 109.5° |
C9 | C10 | O10 | 111.4° | 109.5° |
C9 | C10 | C11 | 124.1° | 109.5° |
C9 | C10 | H10 | 96.7° | 109.4° |
O10 | C10 | C11 | 111.4° | 109.5° |
O10 | C10 | H10 | 114.7° | 109.5° |
C10 | O10 | HO10 | 111.3° | 106.8° |
C11 | C10 | H10 | 96.7° | 109.5° |
C10 | C11 | O11 | 96.4° | 109.5° |
C10 | C11 | C12 | 127.1° | 109.5° |
C10 | C11 | H11 | 104.8° | 109.5° |
O11 | C11 | C12 | 99.6° | 109.5° |
O11 | C11 | H11 | 130.5° | 109.5° |
C11 | O11 | HO11 | 96.4° | 106.8° |
C12 | C11 | H11 | 101.9° | 109.5° |
C11 | C12 | O12 | 104.4° | 109.5° |
C11 | C12 | H121 | 114.1° | 109.5° |
C11 | C12 | H122 | 114.1° | 109.4° |
O12 | C12 | H121 | 114.1° | 109.4° |
O12 | C12 | H122 | 114.1° | 109.4° |
C12 | O12 | HO12 | 104.4° | 106.9° |
H121 | C12 | H122 | 96.4° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | N1 | C6 | HN1 | 125.2° | 179.5° |
N1 | C2 | N3 | O2 | 179.6° | 179.7° |
N1 | C2 | N3 | C4 | 0.1° | 0.2° |
N1 | C2 | N3 | HN3 | 179.9° | 179.7° |
C2 | N1 | C6 | C5 | 5.1° | 0.6° |
C2 | N1 | C6 | N7 | 174.1° | 179.8° |
C6 | N1 | C2 | N3 | 2.6° | 0.5° |
C6 | N1 | C2 | O2 | 177.7° | 179.7° |
N1 | C6 | C5 | C4 | 4.8° | 0.3° |
N1 | C6 | C5 | N7 | 179.2° | 179.7° |
N1 | C6 | C5 | N5 | 179.5° | 179.8° |
N1 | C6 | N7 | C8 | 83.5° | 5.4° |
N1 | C6 | N7 | HN7 | 41.7° | 174.7° |
HN1 | N1 | C2 | N3 | 122.7° | 180.0° |
HN1 | N1 | C2 | O2 | 57.0° | 0.2° |
HN1 | N1 | C6 | C5 | 120.1° | 179.9° |
HN1 | N1 | C6 | N7 | 60.7° | 0.3° |
C2 | N3 | C4 | HN3 | 180.0° | 179.9° |
C2 | N3 | C4 | C5 | 0.0° | 0.0° |
C2 | N3 | C4 | O4 | 179.9° | 180.0° |
O2 | C2 | N3 | C4 | 179.5° | 179.9° |
O2 | C2 | N3 | HN3 | 0.5° | 0.0° |
N3 | C4 | C5 | O4 | 179.8° | 180.0° |
N3 | C4 | C5 | C6 | 2.5° | 0.0° |
N3 | C4 | C5 | N5 | 178.6° | 179.9° |
HN3 | N3 | C4 | C5 | 180.0° | 180.0° |
HN3 | N3 | C4 | O4 | 0.1° | 0.1° |
C4 | C5 | C6 | N5 | 175.7° | 179.9° |
C4 | C5 | C6 | N7 | 174.4° | 180.0° |
C4 | C5 | N5 | O52 | 179.6° | 5.2° |
O4 | C4 | C5 | C6 | 177.7° | 180.0° |
O4 | C4 | C5 | N5 | 1.6° | 0.0° |
C5 | C6 | N7 | C8 | 97.3° | 174.9° |
C5 | C6 | N7 | HN7 | 137.5° | 5.0° |
C6 | C5 | N5 | O52 | 4.7° | 174.7° |
N5 | C5 | C6 | N7 | 1.3° | 0.1° |
C6 | N7 | C8 | HN7 | 125.2° | 179.9° |
C6 | N7 | C8 | C9 | 110.6° | 180.0° |
C6 | N7 | C8 | H81 | 14.6° | 60.1° |
C6 | N7 | C8 | H82 | 124.1° | 59.9° |
N7 | C8 | C9 | H81 | 125.2° | 120.0° |
N7 | C8 | C9 | H82 | 125.3° | 120.1° |
N7 | C8 | H81 | H82 | 116.5° | 120.0° |
N7 | C8 | C9 | O9 | 60.3° | 59.9° |
N7 | C8 | C9 | C10 | 68.3° | 180.0° |
N7 | C8 | C9 | H9 | 173.9° | 60.0° |
HN7 | N7 | C8 | C9 | 14.6° | 0.1° |
HN7 | N7 | C8 | H81 | 139.9° | 120.0° |
HN7 | N7 | C8 | H82 | 110.6° | 119.9° |
C9 | C8 | H81 | H82 | 116.4° | 120.0° |
C8 | C9 | O9 | C10 | 138.5° | 120.1° |
C8 | C9 | O9 | H9 | 111.3° | 119.9° |
C8 | C9 | C10 | H9 | 106.4° | 120.0° |
C8 | C9 | O9 | HO9 | 180.0° | 60.0° |
C8 | C9 | C10 | O10 | 69.1° | 60.0° |
C8 | C9 | C10 | C11 | 68.4° | 180.0° |
C8 | C9 | C10 | H10 | 171.1° | 60.0° |
H81 | C8 | C9 | O9 | 64.9° | 60.0° |
H81 | C8 | C9 | C10 | 166.4° | 60.0° |
H81 | C8 | C9 | H9 | 60.8° | 180.0° |
H82 | C8 | C9 | O9 | 174.4° | 180.0° |
H82 | C8 | C9 | C10 | 56.9° | 60.0° |
H82 | C8 | C9 | H9 | 48.6° | 60.0° |
O9 | C9 | C10 | H9 | 125.5° | 120.0° |
O9 | C9 | C10 | O10 | 59.1° | 180.0° |
O9 | C9 | C10 | C11 | 163.4° | 60.0° |
O9 | C9 | C10 | H10 | 60.7° | 60.1° |
C10 | C9 | O9 | HO9 | 41.5° | 60.0° |
C9 | C10 | O10 | C11 | 143.0° | 120.0° |
C9 | C10 | O10 | H10 | 108.5° | 119.9° |
C9 | C10 | C11 | H10 | 102.7° | 120.0° |
C9 | C10 | O10 | HO10 | 179.9° | 60.0° |
C9 | C10 | C11 | O11 | 0.8° | 60.0° |
C9 | C10 | C11 | C12 | 108.0° | NaN° |
C9 | C10 | C11 | H11 | 134.0° | 60.0° |
H9 | C9 | O9 | HO9 | 68.7° | 180.0° |
H9 | C9 | C10 | O10 | 175.5° | 60.0° |
H9 | C9 | C10 | C11 | 38.0° | 60.0° |
H9 | C9 | C10 | H10 | 64.7° | 180.0° |
O10 | C10 | C11 | H10 | 119.8° | 120.0° |
O10 | C10 | C11 | O11 | 138.3° | 180.0° |
O10 | C10 | C11 | C12 | 114.5° | 60.0° |
O10 | C10 | C11 | H11 | 3.4° | 60.0° |
C11 | C10 | O10 | HO10 | 37.0° | 60.1° |
C10 | C11 | O11 | C12 | 129.4° | 120.0° |
C10 | C11 | O11 | H11 | 115.7° | 120.0° |
C10 | C11 | C12 | H11 | 119.2° | 120.0° |
C10 | C11 | O11 | HO11 | 180.0° | 60.0° |
C10 | C11 | C12 | O12 | 22.1° | 180.0° |
C10 | C11 | C12 | H121 | 103.1° | 60.0° |
C10 | C11 | C12 | H122 | 147.4° | 60.1° |
H10 | C10 | O10 | HO10 | 71.4° | 179.9° |
H10 | C10 | C11 | O11 | 101.9° | 60.0° |
H10 | C10 | C11 | C12 | 5.3° | 60.0° |
H10 | C10 | C11 | H11 | 123.2° | 180.0° |
O11 | C11 | C12 | H11 | 135.2° | 120.0° |
O11 | C11 | C12 | O12 | 127.8° | 60.0° |
O11 | C11 | C12 | H121 | 2.5° | 60.0° |
O11 | C11 | C12 | H122 | 107.0° | 180.0° |
C12 | C11 | O11 | HO11 | 50.6° | 60.0° |
C11 | C12 | O12 | H121 | 125.2° | 120.0° |
C11 | C12 | O12 | H122 | 125.3° | 120.0° |
C11 | C12 | H121 | H122 | 120.1° | 120.0° |
C11 | C12 | O12 | HO12 | 180.0° | 180.0° |
H11 | C11 | O11 | HO11 | 64.3° | 180.0° |
H11 | C11 | C12 | O12 | 97.1° | 60.0° |
H11 | C11 | C12 | H121 | 137.7° | 180.0° |
H11 | C11 | C12 | H122 | 28.2° | 60.0° |
O12 | C12 | H121 | H122 | 120.0° | 120.0° |
H121 | C12 | O12 | HO12 | 54.7° | 60.0° |
H122 | C12 | O12 | HO12 | 54.8° | 60.0° |