LME
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.47Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
N | H | sing | 1.01Å | 1.00Å | |
CA | CB | sing | 1.53Å | 1.57Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | C1 | sing | 1.53Å | 1.55Å | |
CB | CG | sing | 1.53Å | 1.56Å | |
CB | HB | sing | 1.09Å | 1.10Å | |
C1 | H11 | sing | 1.09Å | 1.10Å | |
C1 | H12 | sing | 1.09Å | 1.10Å | |
C1 | H13 | sing | 1.09Å | 1.10Å | |
CG | CD | sing | 1.51Å | 1.51Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CG | HG3 | sing | 1.09Å | 1.10Å | |
CD | OE1 | doub | 1.21Å | 1.36Å | |
CD | OE2 | sing | 1.34Å | 1.26Å | |
OE2 | HE2 | sing | 0.97Å | 0.95Å | |
C | O | doub | 1.21Å | 1.26Å | |
C | OXT | sing | 1.34Å | 1.43Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H2 | 109.5° | 111.0° |
CA | N | H | 109.5° | 111.0° |
N | CA | CB | 112.4° | 109.4° |
N | CA | C | 116.1° | 109.5° |
N | CA | HA | 104.0° | 109.5° |
H2 | N | H | 109.4° | 111.0° |
CB | CA | C | 113.7° | 109.5° |
CB | CA | HA | 107.0° | 109.5° |
CA | CB | C1 | 112.6° | 109.5° |
CA | CB | CG | 112.1° | 109.5° |
CA | CB | HB | 105.6° | 109.5° |
C | CA | HA | 102.3° | 109.5° |
CA | C | O | 117.3° | 120.0° |
CA | C | OXT | 130.0° | 120.0° |
C1 | CB | CG | 110.2° | 109.5° |
C1 | CB | HB | 107.7° | 109.5° |
CB | C1 | H11 | 109.5° | 109.5° |
CB | C1 | H12 | 109.4° | 109.4° |
CB | C1 | H13 | 109.5° | 109.4° |
CG | CB | HB | 108.3° | 109.5° |
CB | CG | CD | 112.4° | 109.4° |
CB | CG | HG2 | 108.5° | 109.5° |
CB | CG | HG3 | 108.5° | 109.5° |
H11 | C1 | H12 | 109.5° | 109.5° |
H11 | C1 | H13 | 109.5° | 109.5° |
H12 | C1 | H13 | 109.5° | 109.4° |
CD | CG | HG2 | 108.5° | 109.5° |
CD | CG | HG3 | 108.5° | 109.4° |
CG | CD | OE1 | 120.0° | 120.0° |
CG | CD | OE2 | 119.8° | 120.0° |
HG2 | CG | HG3 | 110.5° | 109.5° |
OE1 | CD | OE2 | 120.2° | 120.0° |
CD | OE2 | HE2 | 109.5° | 117.0° |
O | C | OXT | 112.6° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H2 | H | 120.0° | 124.0° |
N | CA | CB | C | 134.3° | 120.0° |
N | CA | CB | HA | 113.5° | 120.0° |
N | CA | C | HA | 112.4° | 120.0° |
N | CA | CB | C1 | 69.8° | 60.0° |
N | CA | CB | CG | 55.1° | 60.0° |
N | CA | CB | HB | 172.9° | 180.0° |
N | CA | C | O | 168.8° | 20.0° |
N | CA | C | OXT | 11.2° | 160.0° |
H2 | N | CA | CB | 180.0° | 60.0° |
H2 | N | CA | C | 46.8° | 60.0° |
H2 | N | CA | HA | 64.7° | 180.0° |
H | N | CA | CB | 60.0° | 64.0° |
H | N | CA | C | 73.2° | 176.0° |
H | N | CA | HA | 175.3° | 56.0° |
CB | CA | C | HA | 115.0° | 120.0° |
CA | CB | C1 | CG | 125.9° | 120.0° |
CA | CB | C1 | HB | 116.1° | 120.0° |
CA | CB | CG | HB | 116.1° | 120.0° |
CA | CB | C1 | H11 | 180.0° | 60.0° |
CA | CB | C1 | H12 | 60.0° | 60.1° |
CA | CB | C1 | H13 | 60.0° | 180.0° |
CA | CB | CG | CD | 56.6° | 175.0° |
CA | CB | CG | HG2 | 63.4° | 55.0° |
CA | CB | CG | HG3 | 176.6° | 65.0° |
CB | CA | C | O | 36.2° | 100.0° |
CB | CA | C | OXT | 143.7° | 80.0° |
C | CA | CB | C1 | 64.5° | 60.0° |
C | CA | CB | CG | 170.6° | 180.0° |
C | CA | CB | HB | 52.8° | 60.0° |
CA | C | O | OXT | 180.0° | 180.0° |
CA | C | OXT | HXT | 180.0° | 180.0° |
HA | CA | CB | C1 | 176.7° | 179.9° |
HA | CA | CB | CG | 58.4° | 60.0° |
HA | CA | CB | HB | 59.4° | 60.0° |
HA | CA | C | O | 78.7° | 140.0° |
HA | CA | C | OXT | 101.3° | 40.0° |
C1 | CB | CG | HB | 117.6° | 120.1° |
CB | C1 | H11 | H12 | 120.0° | 120.0° |
CB | C1 | H11 | H13 | 120.0° | 120.0° |
CB | C1 | H12 | H13 | 120.0° | 119.9° |
C1 | CB | CG | CD | 177.2° | 65.0° |
C1 | CB | CG | HG2 | 62.8° | 175.0° |
C1 | CB | CG | HG3 | 57.2° | 54.9° |
CG | CB | C1 | H11 | 54.1° | 60.0° |
CG | CB | C1 | H12 | 65.9° | 180.0° |
CG | CB | C1 | H13 | 174.1° | 60.0° |
CB | CG | CD | HG2 | 120.0° | 120.0° |
CB | CG | CD | HG3 | 120.0° | 120.0° |
CB | CG | HG2 | HG3 | 118.8° | 120.1° |
CB | CG | CD | OE1 | 62.8° | 0.0° |
CB | CG | CD | OE2 | 116.2° | 180.0° |
HB | CB | C1 | H11 | 63.9° | 180.0° |
HB | CB | C1 | H12 | 176.1° | 60.0° |
HB | CB | C1 | H13 | 56.1° | 60.0° |
HB | CB | CG | CD | 59.6° | 55.0° |
HB | CB | CG | HG2 | 179.5° | 65.0° |
HB | CB | CG | HG3 | 60.4° | 175.0° |
H11 | C1 | H12 | H13 | 120.0° | 120.0° |
CD | CG | HG2 | HG3 | 118.8° | 120.0° |
CG | CD | OE1 | OE2 | 179.0° | 180.0° |
CG | CD | OE2 | HE2 | 179.0° | 180.0° |
HG2 | CG | CD | OE1 | 177.2° | 120.0° |
HG2 | CG | CD | OE2 | 3.7° | 60.0° |
HG3 | CG | CD | OE1 | 57.2° | 120.0° |
HG3 | CG | CD | OE2 | 123.8° | 60.0° |
OE1 | CD | OE2 | HE2 | 0.0° | 0.0° |
O | C | OXT | HXT | 0.0° | 0.0° |