Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

LM6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.49Å
C2N1sing1.46Å1.46Å
N1N2sing1.40Å1.36ÅAromatic
N1C5sing1.35Å1.36ÅAromatic
N2C3doub1.31Å1.33ÅAromatic
C6C5sing1.51Å1.49Å
C6N3sing1.47Å1.46Å
C5C4doub1.35Å1.37ÅAromatic
N3C7sing1.47Å1.46Å
C3C4sing1.40Å1.35ÅAromatic
N3H1sing1.01Å1.00Å
C4H3sing1.08Å1.08Å
C6H4sing1.09Å1.10Å
C6H5sing1.09Å1.10Å
C7H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C1H9sing1.09Å1.10Å
C1H10sing1.09Å1.10Å
C1H11sing1.09Å1.10Å
C2H12sing1.09Å1.10Å
C2H13sing1.09Å1.10Å
C3H14sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2N1112.5°109.5°
C2C1H9109.5°109.5°
C2C1H10109.5°109.5°
C2C1H11109.5°109.5°
C1C2H12108.7°109.4°
C1C2H13108.7°109.5°
C2N1N2120.4°126.0°
C2N1C5129.0°126.1°
N1C2H12108.7°109.5°
N1C2H13108.7°109.5°
N2N1C5110.6°107.9°
N1N2C3105.2°108.2°
N1C5C6122.7°126.1°
N1C5C4105.8°107.8°
N2C3C4111.3°108.2°
N2C3H14124.3°125.9°
C5C6N3114.2°109.5°
C6C5C4131.4°126.1°
C5C6H4108.3°109.5°
C5C6H5108.3°109.4°
C6N3C7113.8°111.0°
C6N3H1108.3°111.0°
N3C6H4108.3°109.5°
N3C6H5108.3°109.4°
C5C4C3107.1°107.9°
C5C4H3126.4°126.1°
C7N3H1108.4°110.9°
N3C7H6109.5°109.5°
N3C7H7109.4°109.4°
N3C7H8109.5°109.5°
C3C4H3126.5°126.0°
C4C3H14124.4°125.9°
H4C6H5109.5°109.5°
H6C7H7109.5°109.5°
H6C7H8109.4°109.5°
H7C7H8109.5°109.5°
H9C1H10109.4°109.4°
H9C1H11109.5°109.4°
H10C1H11109.5°109.5°
H12C2H13109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2N1H12120.4°119.9°
C1C2N1H13120.5°120.0°
C1C2N1N283.4°90.1°
C1C2N1C599.0°90.2°
C2C1H9H10120.0°120.0°
C2C1H9H11120.0°120.1°
C2C1H10H11120.0°120.1°
C1C2H12H13118.6°120.0°
C2N1N2C5178.0°179.8°
C2N1N2C3179.4°179.7°
C2N1C5C62.5°0.2°
C2N1C5C4178.8°179.7°
N1C2C1H9180.0°180.0°
N1C2C1H1060.0°60.1°
N1C2C1H1160.0°60.0°
N1C2H12H13118.6°120.1°
N2N1C5C6179.7°180.0°
N2N1C5C41.0°0.1°
N1N2C3C41.2°0.0°
N2N1C2H1237.0°150.0°
N2N1C2H13156.1°30.0°
N1N2C3H14178.8°180.0°
C5N1N2C31.4°0.0°
N1C5C6C4178.3°179.9°
N1C5C6N394.7°84.9°
N1C5C4C30.2°0.1°
N1C5C4H3179.7°179.9°
N1C5C6H426.0°155.0°
N1C5C6H5144.7°35.0°
C5N1C2H12140.6°29.7°
C5N1C2H1321.5°149.7°
N2C3C4C50.6°0.1°
N2C3C4H14180.0°179.9°
N2C3C4H3179.4°179.9°
C5C6N3H4120.7°120.1°
C5C6N3H5120.7°120.0°
C5C6N3C772.2°180.0°
C6C5C4C3178.8°180.0°
C5C6N3H148.4°56.1°
C6C5C4H31.2°0.2°
C5C6H4H5117.9°120.0°
N3C6C5C487.0°94.9°
C6N3C7H1120.6°123.9°
N3C6H4H5117.8°120.0°
C6N3C7H6180.0°180.0°
C6N3C7H760.0°60.0°
C6N3C7H860.0°59.9°
C5C4C3H3180.0°179.9°
C4C5C6H4152.3°25.1°
C4C5C6H533.6°145.1°
C5C4C3H14179.4°180.0°
C7N3C6H4167.1°59.9°
C7N3C6H548.5°60.0°
N3C7H6H7120.0°119.9°
N3C7H6H8120.0°120.0°
N3C7H7H8120.0°119.9°
H1N3C6H472.2°64.0°
H1N3C6H5169.1°176.0°
H1N3C7H659.4°56.0°
H1N3C7H7179.4°176.0°
H1N3C7H860.6°64.0°
H3C4C3H140.6°0.1°
H6C7H7H8120.0°120.1°
H9C1H10H11120.0°119.9°
H9C1C2H1259.5°60.1°
H9C1C2H1359.6°59.9°
H10C1C2H1260.4°180.0°
H10C1C2H13179.5°60.0°
H11C1C2H12179.6°60.0°
H11C1C2H1360.5°180.0°

246905

PDB entries from 2025-12-31

PDB statisticsPDBj update infoContact PDBjnumon