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SummaryGeometryRelated PDB entries

LLC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C29C28sing1.54Å1.56Å
C29C30sing1.55Å1.56Å
C28N27sing1.47Å1.47Å
C30C31sing1.55Å1.56Å
N27C31sing1.48Å1.47Å
N27C26sing1.47Å1.49Å
C26C25sing1.53Å1.55Å
C25O24sing1.43Å1.44Å
O24C23sing1.36Å1.36Å
C23C22doub1.39Å1.40ÅAromatic
C23C32sing1.39Å1.39ÅAromatic
C22C21sing1.38Å1.38ÅAromatic
C32C33doub1.38Å1.38ÅAromatic
C21C20doub1.40Å1.39ÅAromatic
C33C20sing1.40Å1.42ÅAromatic
C20C18sing1.48Å1.48Å
C14C13doub1.37Å1.40ÅAromatic
C14C15sing1.39Å1.39ÅAromatic
C13C12sing1.41Å1.44ÅAromatic
O17C15sing1.36Å1.36Å
C15C16doub1.38Å1.40ÅAromatic
C18C1sing1.46Å1.49Å
C18O19doub1.22Å1.22Å
C9C8doub1.38Å1.39ÅAromatic
C9C3sing1.40Å1.42ÅAromatic
C12C1sing1.46Å1.47ÅAromatic
C12C11doub1.39Å1.43ÅAromatic
C1C2doub1.37Å1.38ÅAromatic
C16C11sing1.40Å1.37ÅAromatic
C11S10sing1.76Å1.79ÅAromatic
C8C6sing1.39Å1.39ÅAromatic
C2S10sing1.75Å1.77ÅAromatic
C2C3sing1.47Å1.48ÅAromatic
C3C4doub1.40Å1.41ÅAromatic
C6O7sing1.36Å1.36Å
C6C5doub1.39Å1.41ÅAromatic
C4C5sing1.38Å1.38ÅAromatic
C4H4sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C13H13sing1.08Å1.08Å
C21H21sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
C26H261sing1.09Å1.10Å
C26H262sing1.09Å1.10Å
C28H281sing1.09Å1.10Å
C28H282sing1.09Å1.10Å
C33H33sing1.08Å1.08Å
C32H32sing1.08Å1.08Å
C25H251sing1.09Å1.10Å
C25H252sing1.09Å1.10Å
C31H311sing1.09Å1.10Å
C31H312sing1.09Å1.10Å
C30H301sing1.09Å1.10Å
C30H302sing1.09Å1.10Å
C29H291sing1.09Å1.10Å
C29H292sing1.09Å1.10Å
C14H14sing1.08Å1.08Å
O17HO17sing0.97Å0.95Å
C16H16sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
O7HO7sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C28C29C30104.0°103.0°
C29C28N27105.6°107.2°
C29C28H281110.8°109.9°
C29C28H282111.6°110.0°
C28C29H291111.4°110.7°
C28C29H292112.5°110.7°
C29C30C31104.4°101.7°
C29C30H301111.2°111.0°
C29C30H302112.3°111.1°
C30C29H291111.3°110.7°
C30C29H292112.5°110.8°
C28N27C31107.2°108.6°
C28N27C26108.1°111.0°
N27C28H281110.8°109.9°
N27C28H282111.6°109.9°
C30C31N27108.4°104.8°
C30C31H311109.8°110.4°
C30C31H312110.1°110.5°
C31C30H301111.2°111.0°
C31C30H302112.3°111.0°
C31N27C26110.3°111.0°
N27C31H311109.8°110.4°
N27C31H312110.0°110.4°
N27C26C25111.7°109.5°
N27C26H261108.7°109.5°
N27C26H262108.2°109.5°
C26C25O24106.1°109.5°
C25C26H261108.7°109.5°
C25C26H262108.2°109.4°
C26C25H251110.6°109.5°
C26C25H252111.3°109.5°
C25O24C23113.2°117.0°
O24C25H251110.6°109.5°
O24C25H252111.4°109.5°
O24C23C22116.0°119.9°
O24C23C32124.2°119.9°
C22C23C32119.8°120.2°
C23C22C21118.5°120.1°
C23C22H22120.8°120.0°
C23C32C33122.3°120.1°
C23C32H32118.8°120.0°
C22C21C20122.2°119.9°
C22C21H21118.9°120.0°
C21C22H22120.8°119.9°
C32C33C20117.8°119.9°
C32C33H33121.1°120.0°
C33C32H32118.8°119.9°
C21C20C33119.4°119.8°
C21C20C18118.0°120.1°
C20C21H21118.9°120.1°
C33C20C18122.6°120.1°
C20C33H33121.1°120.1°
C20C18C1118.6°120.0°
C20C18O19120.2°120.0°
C13C14C15122.8°120.3°
C14C13C12117.9°120.5°
C14C13H13121.1°119.8°
C13C14H14118.6°119.9°
C14C15O17122.2°120.0°
C14C15C16120.2°120.0°
C15C14H14118.6°119.8°
C13C12C1129.2°128.7°
C13C12C11117.1°119.1°
C12C13H13121.1°119.7°
O17C15C16117.6°119.9°
C15O17HO17109.5°114.0°
C15C16C11118.2°120.3°
C15C16H16120.9°119.8°
C1C18O19121.1°120.0°
C18C1C12122.5°123.2°
C18C1C2119.6°123.1°
C8C9C3120.1°119.9°
C9C8C6118.7°120.1°
C9C8H8120.6°120.0°
C8C9H9120.0°120.1°
C9C3C2123.9°120.1°
C9C3C4120.5°119.8°
C3C9H9119.9°120.0°
C1C12C11113.7°112.2°
C12C1C2117.9°113.7°
C12C11C16123.7°119.8°
C12C11S10104.9°110.5°
C1C2S10105.1°110.9°
C1C2C3129.8°124.5°
C16C11S10131.4°129.7°
C11C16H16120.9°119.9°
C11S10C298.5°92.7°
C8C6O7121.0°119.9°
C8C6C5121.6°120.2°
C6C8H8120.7°119.9°
S10C2C3125.1°124.6°
C2C3C4115.6°120.1°
C3C4C5119.1°119.9°
C3C4H4120.4°120.1°
O7C6C5117.3°119.9°
C6O7HO7109.5°114.0°
C6C5C4119.9°120.1°
C6C5H5120.0°120.0°
C5C4H4120.4°120.0°
C4C5H5120.0°119.9°
H261C26H262111.2°109.5°
H281C28H282106.5°109.9°
H251C25H252106.9°109.5°
H311C31H312108.7°110.3°
H301C30H302105.6°110.8°
H291C29H292105.3°110.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C28C29C30H291120.0°118.4°
C28C29C30H292122.0°118.4°
C29C28N27H281120.0°119.5°
C29C28N27H282121.5°119.5°
C28C29C30C3118.7°35.6°
C29C28N27C3131.7°1.0°
C29C28N27C26150.6°123.3°
C29C28H281H282121.5°121.2°
C28C29C30H301101.4°82.5°
C28C29C30H302140.6°153.8°
C28C29H291H292122.2°123.2°
C30C29C28N2731.1°22.3°
C29C30C31H301120.0°118.1°
C29C30C31H302121.9°118.2°
C29C30C31N270.3°37.1°
C30C29C28H281151.1°141.7°
C30C29C28H28290.4°97.2°
C29C30C31H311120.3°155.9°
C29C30C31H312120.1°81.8°
C29C30H301H302122.1°123.9°
C30C29H291H292122.2°123.2°
C28N27C31C3019.6°24.1°
C28N27C31C26117.5°122.2°
C28N27C26C25172.3°170.0°
C28N27C26H26152.3°70.0°
C28N27C26H26268.6°50.1°
N27C28H281H282121.6°121.0°
C28N27C31H311100.4°142.9°
C28N27C31H312140.0°94.8°
N27C28C29H291151.0°96.1°
N27C28C29H29291.0°140.7°
C30C31N27H311120.0°118.8°
C30C31N27H312120.4°118.9°
C30C31N27C26137.1°146.3°
C30C31H311H312120.4°122.4°
C31C30H301H302122.1°123.8°
C31C30C29H291138.7°82.7°
C31C30C29H292103.4°154.0°
C31N27C26C2570.7°69.2°
C31N27C26H261169.3°50.8°
C31N27C26H26248.4°170.9°
C31N27C28H281151.7°118.4°
C31N27C28H28289.8°120.6°
N27C31H311H312120.4°122.3°
N27C31C30H301119.7°81.1°
N27C31C30H302122.2°155.3°
N27C26C25H261120.0°120.0°
N27C26C25H262119.0°120.0°
N27C26C25O2466.9°65.0°
N27C26H261H262119.1°120.1°
C26N27C28H28189.4°3.8°
C26N27C28H28229.2°117.2°
N27C26C25H25153.1°175.0°
N27C26C25H252171.8°55.0°
C26N27C31H31117.2°94.8°
C26N27C31H312102.4°27.4°
C26C25O24H251120.0°120.0°
C26C25O24H252121.3°120.0°
C26C25O24C23166.8°175.1°
C25C26H261H262119.1°119.9°
C26C25H251H252121.3°120.0°
C25O24C23C22178.3°174.3°
C25O24C23C321.4°5.9°
O24C25C26H261173.1°175.0°
O24C25C26H26252.1°55.0°
O24C25H251H252121.4°120.0°
O24C23C22C32179.7°179.7°
O24C23C22C21178.7°179.9°
O24C23C32C33179.2°179.9°
O24C23C22H221.3°0.0°
O24C23C32H320.8°0.0°
C23O24C25H25173.2°64.9°
C23O24C25H25245.5°55.1°
C23C22C21H22180.0°179.9°
C22C23C32C330.5°0.2°
C23C22C21C200.7°0.1°
C23C22C21H21179.4°180.0°
C22C23C32H32179.5°179.8°
C32C23C22C211.0°0.2°
C23C32C33H32180.0°180.0°
C23C32C33C200.5°0.0°
C32C23C22H22179.0°179.7°
C23C32C33H33179.5°180.0°
C22C21C20H21180.0°180.0°
C22C21C20C330.3°0.3°
C22C21C20C18179.1°179.9°
C32C33C20C210.9°0.2°
C32C33C20H33180.0°180.0°
C32C33C20C18179.6°180.0°
C21C20C33C18178.7°179.8°
C21C20C18C111.2°174.9°
C21C20C18O19165.0°5.2°
C20C21C22H22179.4°180.0°
C21C20C33H33179.2°179.7°
C33C20C18C1170.1°5.3°
C33C20C18O1913.8°174.6°
C33C20C21H21179.7°179.8°
C20C33C32H32179.5°180.0°
C20C18C1O19176.1°179.9°
C20C18C1C1269.7°86.7°
C20C18C1C2110.1°93.3°
C18C20C21H210.9°0.0°
C18C20C33H330.4°0.0°
C13C14C15H14180.0°179.9°
C14C13C12H13180.0°179.7°
C13C14C15O17178.2°179.7°
C13C14C15C163.6°0.5°
C14C13C12C1177.1°179.7°
C14C13C12C111.6°0.2°
C15C14C13C123.7°0.0°
C14C15O17C16178.2°179.2°
C14C15C16C111.3°0.8°
C15C14C13H13176.3°179.7°
C14C15O17HO17111.7°90.8°
C14C15C16H16178.7°180.0°
C13C12C1C180.2°0.1°
C13C12C1C11178.7°179.9°
C13C12C1C2179.6°180.0°
C13C12C11C160.6°0.0°
C13C12C11S10179.6°180.0°
C12C13C14H14176.3°180.0°
O17C15C16C11179.5°180.0°
O17C15C14H141.8°0.2°
O17C15C16H160.5°0.8°
C15C16C11C120.8°0.5°
C15C16C11H16180.0°179.2°
C15C16C11S10179.5°179.5°
C16C15C14H14176.4°179.5°
C16C15O17HO1770.1°90.0°
C18C1C12C2179.8°179.9°
C18C1C12C11178.8°180.0°
C18C1C2S10180.0°180.0°
C18C1C2C32.9°0.0°
O19C18C1C12114.2°93.3°
O19C18C1C266.0°86.8°
C8C9C3H9180.0°179.8°
C9C8C6H8180.0°180.0°
C8C9C3C2179.1°180.0°
C8C9C3C40.4°0.6°
C9C8C6O7179.2°180.0°
C9C8C6C50.2°0.0°
C9C3C2C156.3°49.1°
C3C9C8C60.4°0.3°
C9C3C2S10127.2°130.9°
C9C3C2C4179.5°179.4°
C9C3C4C50.2°0.6°
C9C3C4H4179.7°179.7°
C3C9C8H8179.6°179.7°
C1C12C11C16179.4°180.0°
C1C12C11S101.6°0.0°
C12C1C2S100.3°0.0°
C12C1C2C3177.3°179.9°
C1C12C13H133.0°0.0°
C11C12C1C20.9°0.0°
C12C11C16S10178.7°180.0°
C12C11S10C21.5°0.0°
C11C12C13H13178.4°179.9°
C12C11C16H16179.2°179.7°
C1C2S10C111.0°0.0°
C1C2S10C3177.2°180.0°
C1C2C3C4123.3°131.5°
C16C11S10C2179.6°180.0°
C11S10C2C3178.3°180.0°
S10C11C16H160.5°0.3°
C8C6O7C5179.0°180.0°
C8C6C5C40.0°0.0°
C8C6C5H5180.0°180.0°
C6C8C9H9179.6°179.9°
C8C6O7HO711.0°95.0°
S10C2C3C453.2°48.5°
C2C3C4C5179.3°180.0°
C2C3C4H40.8°0.3°
C2C3C9H90.9°0.3°
C3C4C5C60.1°0.3°
C3C4C5H4180.0°179.7°
C3C4C5H5179.9°179.7°
C4C3C9H9179.6°179.7°
O7C6C5C4179.0°180.0°
O7C6C5H50.9°0.0°
O7C6C8H80.8°0.0°
C6C5C4H5180.0°180.0°
C6C5C4H4179.9°180.0°
C5C6C8H8179.8°180.0°
C5C6O7HO7170.0°85.1°
H4C4C5H50.1°0.0°
H8C8C9H90.4°0.0°
H13C13C14H143.7°0.3°
H21C21C22H220.6°0.1°
H261C26C25H25166.9°55.0°
H261C26C25H25251.8°65.0°
H262C26C25H251172.1°65.0°
H262C26C25H25269.2°175.0°
H281C28C29H29189.0°23.3°
H281C28C29H29229.0°99.9°
H282C28C29H29129.6°144.4°
H282C28C29H292147.6°21.2°
H33C33C32H320.5°0.0°
H311C31C30H3010.3°37.8°
H311C31C30H302117.8°85.9°
H312C31C30H301119.8°160.1°
H312C31C30H3021.7°36.4°
H301C30C29H29118.7°159.2°
H301C30C29H292136.6°36.0°
H302C30C29H29199.4°35.4°
H302C30C29H29218.5°87.8°

246905

PDB entries from 2025-12-31

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