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LJD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N2N1sing1.40Å1.35ÅAromatic
N2C4doub1.30Å1.32ÅAromatic
C1N1sing1.46Å1.46Å
N1C2sing1.34Å1.34ÅAromatic
C4C3sing1.41Å1.40ÅAromatic
C2C3doub1.38Å1.40ÅAromatic
C3C5sing1.47Å1.48Å
C5N3sing1.35Å1.34Å
C5O1doub1.22Å1.25Å
N3C6sing1.46Å1.46Å
C6C7sing1.51Å1.51Å
C7C12doub1.38Å1.39ÅAromatic
C7C8sing1.38Å1.38ÅAromatic
C12C11sing1.38Å1.38ÅAromatic
C8C9doub1.38Å1.37ÅAromatic
C11C10doub1.38Å1.38ÅAromatic
C9C10sing1.38Å1.37ÅAromatic
C10CL1sing1.74Å1.74Å
N3H1sing0.97Å1.00Å
C4H2sing1.08Å1.08Å
C6H3sing1.09Å1.10Å
C6H4sing1.09Å1.10Å
C8H5sing1.08Å1.08Å
C1H6sing1.09Å1.10Å
C1H7sing1.09Å1.10Å
C1H8sing1.09Å1.10Å
C11H9sing1.08Å1.08Å
C12H10sing1.08Å1.08Å
C2H11sing1.08Å1.08Å
C9H12sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1N2C4106.4°108.9°
N2N1C1120.6°125.8°
N2N1C2111.4°108.4°
N2C4C3110.9°108.0°
N2C4H2124.5°126.0°
C1N1C2128.0°125.8°
N1C1H6109.5°109.5°
N1C1H7109.4°109.5°
N1C1H8109.4°109.5°
N1C2C3107.1°107.5°
N1C2H11126.4°126.3°
C4C3C2104.2°107.2°
C4C3C5130.2°126.4°
C3C4H2124.5°126.0°
C2C3C5125.7°126.4°
C3C2H11126.5°126.3°
C3C5N3117.8°120.0°
C3C5O1120.4°120.0°
N3C5O1121.8°120.0°
C5N3C6121.8°120.1°
C5N3H1119.1°120.0°
N3C6C7113.0°109.5°
C6N3H1119.1°119.9°
N3C6H3108.6°109.4°
N3C6H4108.6°109.5°
C6C7C12121.2°120.0°
C6C7C8120.6°120.0°
C7C6H3108.6°109.5°
C7C6H4108.6°109.5°
C12C7C8118.2°120.0°
C7C12C11120.8°120.0°
C7C12H10119.6°120.0°
C7C8C9121.4°120.0°
C7C8H5119.3°120.0°
C12C11C10119.3°120.0°
C12C11H9120.4°120.0°
C11C12H10119.6°120.0°
C8C9C10119.1°120.0°
C9C8H5119.3°120.0°
C8C9H12120.4°120.0°
C11C10C9121.1°119.9°
C11C10CL1119.8°120.0°
C10C11H9120.4°120.0°
C9C10CL1119.1°120.0°
C10C9H12120.4°120.0°
H3C6H4109.5°109.5°
H6C1H7109.5°109.5°
H6C1H8109.5°109.4°
H7C1H8109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N2N1C1C2179.0°179.6°
N1N2C4C30.6°0.5°
N2N1C2C30.7°0.3°
N1N2C4H2179.4°179.8°
N2N1C1H60.0°90.4°
N2N1C1H7120.0°29.6°
N2N1C1H8120.0°149.6°
N2N1C2H11179.3°179.7°
C4N2N1C1180.0°179.8°
C4N2N1C20.8°0.5°
N2C4C3H2180.0°179.7°
N2C4C3C20.2°0.3°
N2C4C3C5179.4°180.0°
C1N1C2C3179.8°180.0°
N1C1H6H7120.0°120.0°
N1C1H6H8120.0°120.1°
N1C1H7H8120.0°120.0°
C1N1C2H110.2°0.0°
N1C2C3C40.3°0.0°
N1C2C3H11180.0°180.0°
N1C2C3C5179.9°179.7°
C2N1C1H6179.0°90.0°
C2N1C1H761.0°150.0°
C2N1C1H859.0°30.0°
C4C3C2C5179.6°179.7°
C4C3C5N311.8°0.0°
C4C3C5O1168.7°180.0°
C4C3C2H11179.7°180.0°
C2C3C5N3168.7°179.6°
C2C3C5O110.7°0.4°
C2C3C4H2179.8°180.0°
C3C5N3O1179.5°180.0°
C3C5N3C6172.2°180.0°
C3C5N3H17.8°0.0°
C5C3C4H20.6°0.3°
C5C3C2H110.1°0.3°
C5N3C6H1180.0°180.0°
C5N3C6C757.9°180.0°
C5N3C6H3178.4°60.0°
C5N3C6H462.6°60.0°
O1C5N3C67.3°0.0°
O1C5N3H1172.7°180.0°
N3C6C7H3120.5°120.0°
N3C6C7H4120.5°120.0°
N3C6C7C12113.9°90.0°
N3C6C7C866.3°89.7°
N3C6H3H4118.4°119.9°
C6C7C12C8179.8°179.7°
C6C7C12C11179.3°180.0°
C6C7C8C9178.8°180.0°
C7C6N3H1122.1°0.0°
C7C6H3H4118.4°120.0°
C6C7C8H51.2°0.0°
C6C7C12H100.7°0.0°
C7C12C11H10180.0°180.0°
C12C7C8C91.3°0.3°
C7C12C11C100.8°0.0°
C12C7C6H3125.6°30.0°
C12C7C6H46.6°150.0°
C12C7C8H5178.6°179.7°
C7C12C11H9179.2°180.0°
C8C7C12C110.8°0.3°
C7C8C9H5180.0°180.0°
C7C8C9C101.8°0.0°
C8C7C6H354.2°150.3°
C8C7C6H4173.2°30.3°
C8C7C12H10179.2°179.7°
C7C8C9H12178.2°179.9°
C12C11C10H9180.0°180.0°
C12C11C10C91.3°0.2°
C12C11C10CL1180.0°180.0°
C8C9C10C111.8°0.2°
C8C9C10H12180.0°179.9°
C8C9C10CL1179.5°180.0°
C11C10C9CL1178.7°179.8°
C10C11C12H10179.2°180.0°
C11C10C9H12178.2°179.8°
C10C9C8H5178.2°180.0°
C9C10C11H9178.7°179.7°
CL1C10C11H90.0°0.0°
CL1C10C9H120.5°0.0°
H1N3C6H31.5°120.0°
H1N3C6H4117.4°120.0°
H5C8C9H121.8°0.1°
H6C1H7H8120.0°119.9°
H9C11C12H100.8°0.0°

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PDB entries from 2024-07-17

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