Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

LIY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C1sing1.35Å1.35ÅAromatic
N1C2doub1.35Å1.35ÅAromatic
N3C1sing1.42Å1.36Å
N3HN31sing1.00Å1.00Å
N3HN32sing1.00Å1.00Å
C4C12sing1.45Å1.48ÅAromatic
C4C1doub1.38Å1.48ÅAromatic
C4C3sing1.38Å1.47ÅAromatic
C6C3sing1.49Å1.50Å
C6C20sing1.52Å1.51Å
C6H61sing1.10Å1.10Å
C6H62sing1.10Å1.10Å
C7C8sing1.39Å1.39ÅAromatic
C7C12doub1.39Å1.39ÅAromatic
C7H7sing1.08Å1.08Å
C8C9doub1.41Å1.39ÅAromatic
C8H8sing1.09Å1.08Å
C10C9sing1.42Å1.48ÅAromatic
C10N5sing1.40Å1.40Å
C10C11doub1.41Å1.38ÅAromatic
C13C14sing1.52Å1.52Å
C13C9sing1.51Å1.50Å
C13H131sing1.10Å1.10Å
C13H132sing1.10Å1.10Å
C15C21sing1.52Å1.49Å
C15C14sing1.53Å1.53Å
C15N5sing1.47Å1.46Å
C15H15sing1.10Å1.10Å
C17C16sing1.52Å1.53Å
C17C18sing1.52Å1.52Å
C17H171sing1.10Å1.10Å
C17H172sing1.10Å1.10Å
C20H201sing1.10Å1.10Å
C20H202sing1.09Å1.10Å
C20H203sing1.10Å1.10Å
C21C26doub1.39Å1.40ÅAromatic
C21C22sing1.39Å1.39ÅAromatic
C22C23doub1.39Å1.40ÅAromatic
C22H22sing1.09Å1.08Å
C24C25doub1.39Å1.40ÅAromatic
C24C23sing1.40Å1.39ÅAromatic
C24H24sing1.09Å1.08Å
C26C25sing1.40Å1.40ÅAromatic
C26H26sing1.09Å1.08Å
C3N2doub1.35Å1.35ÅAromatic
N2C2sing1.35Å1.35ÅAromatic
C2N4sing1.41Å1.35Å
N4HN41sing1.00Å1.00Å
N4HN42sing1.00Å1.00Å
C12C11sing1.40Å1.39ÅAromatic
C11H11sing1.09Å1.08Å
C14H141sing1.10Å1.10Å
C14H142sing1.10Å1.10Å
C23H23sing1.09Å1.08Å
C25H25sing1.09Å1.08Å
N5C16sing1.46Å1.47Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
C18O1sing1.42Å1.42Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
O1C19sing1.42Å1.43Å
C19H191sing1.09Å1.10Å
C19H192sing1.09Å1.10Å
C19H193sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1N1C2121.6°115.0°
N1C1N3120.2°117.4°
N1C1C4118.5°123.8°
N1C2N2122.6°126.9°
N1C2N4118.3°116.5°
C1N3HN31109.5°118.9°
C1N3HN32109.5°118.8°
N3C1C4121.3°118.8°
HN31N3HN32109.4°122.0°
C12C4C1120.2°122.6°
C12C4C3122.5°121.8°
C4C12C7124.7°119.9°
C4C12C11113.3°120.0°
C1C4C3117.3°115.6°
C4C3C6121.2°121.0°
C4C3N2117.8°123.8°
C3C6C20108.2°112.2°
C3C6H61109.9°110.3°
C3C6H62110.1°110.2°
C6C3N2121.0°115.2°
C20C6H61109.9°109.2°
C20C6H62110.1°109.2°
C6C20H201109.5°111.1°
C6C20H202109.4°110.6°
C6C20H203109.5°111.1°
H61C6H62108.5°105.4°
C8C7C12119.6°119.4°
C8C7H7120.2°120.4°
C7C8C9120.6°120.7°
C7C8H8119.7°119.2°
C12C7H7120.2°120.1°
C7C12C11122.0°120.1°
C9C8H8119.7°120.2°
C8C9C10119.4°120.9°
C8C9C13120.8°118.2°
C9C10N5121.0°121.1°
C9C10C11117.6°116.8°
C10C9C13119.8°120.9°
N5C10C11121.3°122.2°
C10N5C15122.3°121.2°
C10N5C16124.1°120.9°
C10C11C12120.8°122.0°
C10C11H11119.6°120.8°
C14C13C9109.5°110.7°
C14C13H131109.5°108.8°
C14C13H132109.5°110.5°
C13C14C15116.0°111.7°
C13C14H141107.3°108.8°
C13C14H142105.9°109.8°
C9C13H131109.5°110.4°
C9C13H132109.5°108.8°
H131C13H132109.5°107.7°
C21C15C14112.3°112.7°
C21C15N5110.5°113.4°
C21C15H15106.4°104.6°
C15C21C26122.6°119.8°
C15C21C22118.5°119.8°
C14C15N5108.2°111.2°
C14C15H15108.7°106.8°
C15C14H141107.4°108.7°
C15C14H142105.9°110.9°
N5C15H15110.7°107.7°
C15N5C16113.5°117.8°
C16C17C18109.8°112.8°
C16C17H171109.4°109.3°
C16C17H172109.3°110.5°
C17C16N5111.2°112.5°
C17C16H161108.9°110.1°
C17C16H162108.5°111.1°
C18C17H171109.3°108.9°
C18C17H172109.3°109.3°
C17C18O1110.9°108.7°
C17C18H181109.0°111.3°
C17C18H182108.7°110.8°
H171C17H172109.8°105.9°
H201C20H202109.5°108.0°
H201C20H203109.4°107.9°
H202C20H203109.5°108.0°
C26C21C22118.9°120.5°
C21C26C25120.8°119.7°
C21C26H26119.6°120.7°
C21C22C23120.6°119.8°
C21C22H22119.7°120.7°
C23C22H22119.7°119.5°
C22C23C24120.5°120.0°
C22C23H23119.8°120.0°
C25C24C23119.4°120.0°
C25C24H24120.3°120.0°
C24C25C26119.9°120.0°
C24C25H25120.0°120.1°
C23C24H24120.3°120.0°
C24C23H23119.8°120.0°
C25C26H26119.6°119.5°
C26C25H25120.0°119.9°
C3N2C2122.2°114.9°
N2C2N4119.1°116.5°
C2N4HN41109.5°119.1°
C2N4HN42109.5°119.1°
HN41N4HN42109.5°121.5°
C12C11H11119.6°117.2°
H141C14H142114.7°106.8°
N5C16H161108.9°106.9°
N5C16H162108.5°107.8°
H161C16H162110.9°108.3°
O1C18H181109.0°108.4°
O1C18H182108.7°108.5°
C18O1C19112.0°111.5°
H181C18H182110.6°109.1°
O1C19H191109.5°109.5°
O1C19H192109.4°109.5°
O1C19H193109.4°109.0°
H191C19H192109.4°110.1°
H191C19H193109.5°109.4°
H192C19H193109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C1N3C4179.7°180.0°
N1C1N3HN3198.2°69.4°
N1C1N3HN32141.8°104.3°
N1C1C4C12178.0°180.0°
N1C1C4C31.0°0.0°
C1N1C2N21.5°0.0°
C1N1C2N4179.6°180.0°
C2N1C1N3179.4°179.9°
C2N1C1C41.0°0.0°
N1C2N2C32.2°0.0°
N1C2N2N4178.9°180.0°
N1C2N4HN419.4°69.5°
N1C2N4HN42129.4°116.8°
C1N3HN31HN32120.0°173.5°
N3C1C4C122.3°0.1°
N3C1C4C3179.3°180.0°
HN31N3C1C482.1°110.5°
HN32N3C1C437.9°75.8°
C12C4C1C3177.0°180.0°
C12C4C3C61.9°0.0°
C4C12C7C8179.9°179.9°
C4C12C7C11179.2°179.8°
C4C12C7H70.1°0.2°
C4C12C11C10179.9°179.9°
C12C4C3N2178.5°180.0°
C4C12C11H110.1°0.3°
C1C4C3C6178.8°179.9°
C1C4C12C7100.4°90.0°
C1C4C3N21.6°0.0°
C1C4C12C1178.8°90.2°
C4C3C6N2179.6°180.0°
C4C3C6C20106.9°90.1°
C4C3C6H61133.0°32.0°
C4C3C6H6213.5°148.0°
C3C4C12C782.7°90.0°
C4C3N2C22.2°0.0°
C3C4C12C1198.0°89.7°
C3C6C20H61120.0°122.6°
C3C6C20H62120.5°122.6°
C3C6H61H62120.5°119.0°
C3C6C20H201106.3°60.0°
C3C6C20H202133.7°180.0°
C3C6C20H20313.7°60.0°
C6C3N2C2178.2°179.9°
C20C6H61H62120.5°117.2°
C6C20H201H202120.0°121.5°
C6C20H201H203120.0°121.9°
C6C20H202H203120.0°121.8°
C20C6C3N273.5°89.9°
H61C6C20H20113.7°177.3°
H61C6C20H202106.3°57.4°
H61C6C20H203133.7°62.6°
H61C6C3N246.5°148.1°
H62C6C20H201133.3°62.5°
H62C6C20H20213.2°57.4°
H62C6C20H203106.8°177.4°
H62C6C3N2166.0°32.1°
C8C7C12H7180.0°179.9°
C7C8C9H8180.0°179.8°
C7C8C9C100.8°1.3°
C7C8C9C13178.9°179.3°
C8C7C12C110.7°0.3°
C12C7C8C90.8°0.4°
C12C7C8H8179.2°179.8°
C7C12C11C100.6°0.1°
C7C12C11H11179.4°179.5°
H7C7C8C9179.2°179.7°
H7C7C8H80.8°0.1°
H7C7C12C11179.3°179.6°
C8C9C10C13179.7°178.0°
C8C9C10N5178.6°178.5°
C8C9C10C110.7°1.4°
C8C9C13C14159.5°157.1°
C8C9C13H13180.5°36.6°
C8C9C13H13239.5°81.3°
H8C8C9C10179.2°178.9°
H8C8C9C131.1°0.9°
C9C10N5C11177.8°179.9°
C10C9C13C1420.8°24.8°
C10C9C13H13199.2°145.3°
C10C9C13H132140.8°96.7°
C9C10N5C154.7°2.9°
C9C10C11C120.6°0.7°
C9C10C11H11179.4°179.6°
C9C10N5C16179.6°179.3°
N5C10C9C131.1°0.5°
C10N5C15C2192.4°98.9°
C10N5C15C1431.0°29.3°
C10N5C15C16176.1°176.5°
C10N5C15H15150.0°145.9°
C10N5C16C1773.1°81.0°
N5C10C11C12178.5°179.1°
N5C10C11H111.5°0.5°
C10N5C16H161166.9°39.9°
C10N5C16H16246.2°156.2°
C11C10C9C13179.0°179.4°
C11C10N5C15173.1°177.0°
C10C11C12H11180.0°179.6°
C11C10N5C162.6°0.6°
C14C13C9H131120.0°120.5°
C14C13C9H132120.0°121.6°
C14C13H131H132120.0°119.8°
C13C14C15C2167.1°75.4°
C13C14C15H141120.0°120.0°
C13C14C15H142117.0°122.9°
C13C14C15N555.2°53.2°
C13C14C15H15175.4°170.4°
C13C14H141H142117.3°118.5°
C9C13H131H132120.0°118.6°
C9C13C14C1550.2°50.6°
C9C13C14H14169.8°69.4°
C9C13C14H142167.2°174.1°
H131C13C14C1569.8°172.0°
H131C13C14H141170.2°52.1°
H131C13C14H14247.2°64.5°
H132C13C14C15170.2°70.0°
H132C13C14H14150.2°170.1°
H132C13C14H14272.8°53.6°
C21C15C14N5122.2°128.6°
C21C15C14H15117.5°114.2°
C21C15N5H15117.6°115.2°
C15C21C26C22178.6°180.0°
C15C21C22C23179.6°180.0°
C15C21C22H220.3°0.0°
C15C21C26C25179.6°180.0°
C15C21C26H260.5°0.0°
C21C15C14H141173.0°164.6°
C21C15C14H14250.0°47.6°
C21C15N5C1683.7°77.6°
C14C15N5H15119.0°116.6°
C14C15C21C2679.8°90.0°
C14C15C21C22101.5°90.0°
C15C14H141H142117.3°119.7°
C14C15N5C16152.9°154.2°
C15N5C16C17110.9°102.5°
N5C15C21C2641.1°37.4°
N5C15C21C22137.5°142.6°
N5C15C14H14164.8°66.8°
N5C15C14H142172.2°176.1°
C15N5C16H1619.1°136.5°
C15N5C16H162129.9°20.3°
H15C15C21C26161.3°154.4°
H15C15C21C2217.3°25.6°
H15C15C14H14155.4°50.4°
H15C15C14H14267.5°66.7°
H15C15N5C1633.9°37.6°
C16C17C18H171120.0°121.5°
C16C17C18H172119.8°123.3°
C16C17H171H172119.9°119.0°
C17C16N5H161120.0°120.9°
C17C16N5H162119.2°122.8°
C17C16H161H162119.3°121.6°
C16C17C18O1167.3°179.3°
C16C17C18H18147.3°60.0°
C16C17C18H18273.3°61.5°
C18C17H171H172119.9°117.4°
C18C17C16N5156.3°60.8°
C18C17C16H16183.7°180.0°
C18C17C16H16237.0°60.1°
C17C18O1H181120.0°121.1°
C17C18O1H182119.4°120.6°
C17C18H181H182119.4°122.6°
C17C18O1C19176.1°178.9°
H171C17C16N536.3°177.9°
H171C17C16H161156.3°58.8°
H171C17C16H16282.9°61.1°
H171C17C18O172.7°59.3°
H171C17C18H181167.3°178.5°
H171C17C18H18246.7°59.9°
H172C17C16N583.8°61.8°
H172C17C16H16136.1°57.3°
H172C17C16H162156.9°177.2°
H172C17C18O147.4°56.0°
H172C17C18H18172.6°63.3°
H172C17C18H182166.8°175.2°
H201C20H202H203120.0°116.4°
C26C21C22C231.0°0.0°
C26C21C22H22179.0°180.0°
C21C26C25C240.2°0.0°
C21C26C25H26180.0°180.0°
C21C26C25H25179.8°180.0°
C21C22C23H22180.0°180.0°
C21C22C23C240.3°0.0°
C22C21C26C250.9°0.0°
C22C21C26H26179.1°180.0°
C21C22C23H23179.7°180.0°
C22C23C24C250.4°0.1°
C22C23C24H23180.0°180.0°
C22C23C24H24179.6°180.0°
H22C22C23C24179.7°180.0°
H22C22C23H230.3°0.0°
C25C24C23H24180.0°179.9°
C24C25C26H25180.0°180.0°
C24C25C26H26179.8°180.0°
C25C24C23H23179.6°180.0°
C23C24C25C260.5°0.1°
C23C24C25H25179.6°180.0°
H24C24C25C26179.5°180.0°
H24C24C23H230.5°0.0°
H24C24C25H250.5°0.0°
H26C26C25H250.2°0.0°
C3N2C2N4178.9°180.0°
N2C2N4HN41169.5°110.5°
N2C2N4HN4249.5°63.2°
C2N4HN41HN42120.0°173.6°
N5C16H161H162119.3°116.0°
O1C18H181H182119.5°117.9°
C18O1C19H1917.1°92.4°
C18O1C19H192112.9°146.8°
C18O1C19H193127.1°27.2°
H181C18O1C1956.1°60.0°
H182C18O1C1964.4°58.3°
O1C19H191H192120.0°120.4°
O1C19H191H193120.0°119.4°
O1C19H192H193120.0°119.3°
H191C19H192H193120.0°120.3°

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon