LIS
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.48Å | |
N | HN1 | sing | 1.01Å | 1.03Å | |
N | HN2 | sing | 1.01Å | 1.03Å | |
CA | CB | sing | 1.53Å | 1.60Å | |
CA | C | sing | 1.51Å | 1.49Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | CG | sing | 1.53Å | 1.51Å | |
CB | HBC1 | sing | 1.09Å | 1.10Å | |
CB | HBC2 | sing | 1.09Å | 1.10Å | |
CG | CD | sing | 1.53Å | 1.50Å | |
CG | OD1 | sing | 1.43Å | 1.46Å | |
CG | HG | sing | 1.09Å | 1.10Å | |
C | O | sing | 1.34Å | 1.35Å | |
C | OXT | doub | 1.21Å | 1.35Å | |
CD | OD1 | sing | 1.43Å | 1.48Å | |
CD | HDC1 | sing | 1.09Å | 1.10Å | |
CD | HDC2 | sing | 1.09Å | 1.10Å | |
O | H | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | HN1 | 109.5° | 106.7° |
CA | N | HN2 | 109.5° | 106.7° |
N | CA | CB | 110.9° | 109.5° |
N | CA | C | 109.1° | 109.4° |
N | CA | HA | 107.3° | 109.4° |
HN1 | N | HN2 | 109.5° | 106.7° |
CB | CA | C | 104.4° | 109.5° |
CB | CA | HA | 111.7° | 109.5° |
CA | CB | CG | 112.6° | 109.5° |
CA | CB | HBC1 | 108.7° | 109.5° |
CA | CB | HBC2 | 107.6° | 109.5° |
C | CA | HA | 113.4° | 109.5° |
CA | C | O | 119.9° | 120.0° |
CA | C | OXT | 119.9° | 120.1° |
CG | CB | HBC1 | 108.7° | 109.4° |
CG | CB | HBC2 | 107.6° | 109.5° |
CB | CG | CD | 122.3° | 117.8° |
CB | CG | OD1 | 118.3° | 117.8° |
CB | CG | HG | 89.7° | 115.7° |
HBC1 | CB | HBC2 | 111.7° | 109.4° |
CD | CG | OD1 | 60.1° | 57.7° |
CD | CG | HG | 133.2° | 117.7° |
CG | CD | OD1 | 58.6° | 57.6° |
CG | CD | HDC1 | 120.2° | 117.8° |
CG | CD | HDC2 | 135.6° | 117.8° |
OD1 | CG | HG | 136.7° | 117.7° |
CG | OD1 | CD | 61.4° | 64.7° |
O | C | OXT | 120.0° | 119.9° |
C | O | H | 119.9° | 120.0° |
OD1 | CD | HDC1 | 120.2° | 117.8° |
OD1 | CD | HDC2 | 135.6° | 117.8° |
HDC1 | CD | HDC2 | 89.7° | 115.7° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | HN1 | HN2 | 120.0° | 113.8° |
N | CA | CB | C | 117.4° | 120.0° |
N | CA | CB | HA | 119.6° | 120.0° |
N | CA | C | HA | 119.5° | 119.9° |
N | CA | CB | CG | 30.9° | 60.0° |
N | CA | CB | HBC1 | 89.5° | 60.0° |
N | CA | CB | HBC2 | 149.4° | 180.0° |
N | CA | C | O | 0.2° | 150.1° |
N | CA | C | OXT | 176.3° | 30.1° |
HN1 | N | CA | CB | 106.1° | 60.0° |
HN1 | N | CA | C | 139.4° | 60.0° |
HN1 | N | CA | HA | 16.2° | 180.0° |
HN2 | N | CA | CB | 134.0° | 53.8° |
HN2 | N | CA | C | 19.5° | 173.9° |
HN2 | N | CA | HA | 103.8° | 66.2° |
CB | CA | C | HA | 121.9° | 120.1° |
CA | CB | CG | HBC1 | 120.4° | 120.1° |
CA | CB | CG | HBC2 | 118.5° | 120.0° |
CA | CB | HBC1 | HBC2 | 118.6° | 120.0° |
CA | CB | CG | CD | 179.8° | 178.6° |
CA | CB | CG | OD1 | 109.0° | 112.5° |
CA | CB | CG | HG | 36.4° | 34.4° |
CB | CA | C | O | 118.8° | 89.9° |
CB | CA | C | OXT | 65.0° | 90.0° |
C | CA | CB | CG | 148.4° | 180.0° |
C | CA | CB | HBC1 | 27.9° | 60.0° |
C | CA | CB | HBC2 | 93.2° | 60.0° |
CA | C | O | OXT | 176.1° | 179.9° |
CA | C | O | H | 180.0° | 180.0° |
HA | CA | CB | CG | 88.7° | 60.0° |
HA | CA | CB | HBC1 | 150.9° | 180.0° |
HA | CA | CB | HBC2 | 29.8° | 60.0° |
HA | CA | C | O | 119.3° | 30.2° |
HA | CA | C | OXT | 56.8° | 150.0° |
CG | CB | HBC1 | HBC2 | 118.6° | 119.9° |
CB | CG | CD | OD1 | 106.4° | 106.9° |
CB | CG | CD | HG | 125.9° | 146.3° |
CB | CG | OD1 | HG | 124.2° | 146.2° |
CB | CG | CD | HDC1 | 144.5° | 146.4° |
CB | CG | CD | HDC2 | 18.5° | 0.0° |
HBC1 | CB | CG | CD | 59.8° | 61.3° |
HBC1 | CB | CG | OD1 | 130.5° | 127.4° |
HBC1 | CB | CG | HG | 84.0° | 85.7° |
HBC2 | CB | CG | CD | 61.3° | 58.6° |
HBC2 | CB | CG | OD1 | 9.4° | 7.5° |
HBC2 | CB | CG | HG | 154.9° | 154.4° |
CD | CG | OD1 | HG | 122.8° | 106.8° |
CG | CD | OD1 | HDC1 | 109.1° | 106.9° |
CG | CD | OD1 | HDC2 | 125.0° | 106.8° |
CG | CD | HDC1 | HDC2 | 145.5° | 147.0° |
HG | CG | CD | HDC1 | 18.6° | 0.0° |
HG | CG | CD | HDC2 | 107.4° | 146.3° |
OXT | C | O | H | 3.9° | 0.1° |
OD1 | CD | HDC1 | HDC2 | 145.5° | 146.9° |