LHH

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O2	C2	doub	1.22Å	0.00Å
C1	O2'	sing	1.43Å	0.00Å
N3	C2	sing	1.33Å	0.00Å
N3	C4	doub	1.33Å	0.00Å
C2	N1	sing	1.35Å	0.00Å
N4	C4	sing	1.38Å	0.00Å
N4	C7	sing	1.35Å	0.00Å
C4	C5	sing	1.41Å	0.00Å
O2'	C2'	sing	1.43Å	0.00Å
N1	C1'	sing	1.46Å	0.00Å
N1	C6	sing	1.36Å	0.00Å
C1'	C2'	sing	1.55Å	0.00Å
C1'	O4'	sing	1.44Å	0.00Å
O7	C7	doub	1.21Å	0.00Å
C2'	C3'	sing	1.55Å	0.00Å
C7	CM7	sing	1.51Å	0.00Å
C5	C6	doub	1.36Å	0.00Å
O4'	C4'	sing	1.44Å	0.00Å
C3'	C4'	sing	1.54Å	0.00Å
C3'	O3'	sing	1.43Å	0.00Å
C4'	C5'	sing	1.53Å	0.00Å
C5'	O5'	sing	1.43Å	0.00Å
O5'	P	sing	1.61Å	0.00Å
P	OP1	sing	1.61Å	0.00Å
P	OP2	doub	1.48Å	0.00Å
C5	H1	sing	1.08Å	0.00Å
C6	H2	sing	1.08Å	0.00Å
N4	H3	sing	0.97Å	0.00Å
C1	H4	sing	1.09Å	0.00Å
C1	H5	sing	1.09Å	0.00Å
C1	H6	sing	1.09Å	0.00Å
C1'	H7	sing	1.09Å	0.00Å
C2'	H8	sing	1.09Å	0.00Å
C3'	H9	sing	1.09Å	0.00Å
C4'	H10	sing	1.09Å	0.00Å
C5'	H11	sing	1.09Å	0.00Å
C5'	H12	sing	1.09Å	0.00Å
CM7	H13	sing	1.09Å	0.00Å
CM7	H14	sing	1.09Å	0.00Å
CM7	H15	sing	1.09Å	0.00Å
O3'	H16	sing	0.97Å	0.00Å
OP1	H17	sing	0.97Å	0.00Å
P	OP3	sing	1.61Å	0.00Å
OP3	H18	sing	0.97Å	0.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O2	C2	N3	90.0°	119.5°
O2	C2	N1	90.0°	119.4°
C1	O2'	C2'	90.0°	114.0°
O2'	C1	H4	90.0°	109.5°
O2'	C1	H5	90.0°	109.5°
O2'	C1	H6	90.0°	109.5°
C2	N3	C4	90.0°	120.7°
N3	C2	N1	90.0°	121.1°
N3	C4	N4	90.0°	120.2°
N3	C4	C5	90.0°	119.7°
C2	N1	C1'	90.0°	119.9°
C2	N1	C6	90.0°	120.3°
C4	N4	C7	90.0°	120.0°
N4	C4	C5	90.0°	120.2°
C4	N4	H3	90.0°	120.0°
N4	C7	O7	90.0°	120.0°
N4	C7	CM7	90.0°	120.0°
C7	N4	H3	90.0°	120.0°
C4	C5	C6	90.0°	119.0°
C4	C5	H1	90.0°	120.5°
O2'	C2'	C1'	90.0°	111.0°
O2'	C2'	C3'	90.0°	110.9°
O2'	C2'	H8	90.0°	110.9°
C1'	N1	C6	90.0°	119.9°
N1	C1'	C2'	90.0°	110.6°
N1	C1'	O4'	90.0°	110.6°
N1	C1'	H7	90.0°	110.6°
N1	C6	C5	90.0°	119.3°
N1	C6	H2	90.0°	120.3°
C2'	C1'	O4'	90.0°	103.5°
C1'	C2'	C3'	90.0°	102.1°
C2'	C1'	H7	90.0°	110.6°
C1'	C2'	H8	90.0°	110.9°
C1'	O4'	C4'	90.0°	107.0°
O4'	C1'	H7	90.0°	110.8°
O7	C7	CM7	90.0°	120.0°
C2'	C3'	C4'	90.0°	104.2°
C2'	C3'	O3'	90.0°	110.5°
C3'	C2'	H8	90.0°	110.9°
C2'	C3'	H9	90.0°	110.5°
C7	CM7	H13	90.0°	109.5°
C7	CM7	H14	90.0°	109.5°
C7	CM7	H15	90.0°	109.5°
C6	C5	H1	90.0°	120.5°
C5	C6	H2	90.0°	120.4°
O4'	C4'	C3'	90.0°	107.3°
O4'	C4'	C5'	90.0°	109.9°
O4'	C4'	H10	90.0°	110.0°
C4'	C3'	O3'	90.0°	110.5°
C3'	C4'	C5'	90.0°	109.9°
C4'	C3'	H9	90.0°	110.5°
C3'	C4'	H10	90.0°	109.9°
O3'	C3'	H9	90.0°	110.6°
C3'	O3'	H16	90.0°	114.0°
C4'	C5'	O5'	90.0°	109.5°
C5'	C4'	H10	90.0°	109.8°
C4'	C5'	H11	90.0°	109.5°
C4'	C5'	H12	90.0°	109.4°
C5'	O5'	P	90.0°	123.0°
O5'	C5'	H11	90.0°	109.5°
O5'	C5'	H12	90.0°	109.5°
O5'	P	OP1	90.0°	109.4°
O5'	P	OP2	90.0°	109.5°
O5'	P	OP3	90.0°	109.5°
OP1	P	OP2	90.0°	109.5°
P	OP1	H17	90.0°	114.0°
OP1	P	OP3	90.0°	109.4°
OP2	P	OP3	90.0°	109.5°
H4	C1	H5	90.0°	109.5°
H4	C1	H6	90.0°	109.4°
H5	C1	H6	90.0°	109.4°
H11	C5'	H12	90.0°	109.5°
H13	CM7	H14	90.0°	109.4°
H13	CM7	H15	90.0°	109.5°
H14	CM7	H15	90.0°	109.4°
P	OP3	H18	90.0°	114.1°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O2	C2	N3	N1	90.0°	179.9°
O2	C2	N3	C4	90.0°	180.0°
O2	C2	N1	C1'	90.0°	0.1°
O2	C2	N1	C6	90.0°	180.0°
C1	O2'	C2'	C1'	90.0°	150.0°
C1	O2'	C2'	C3'	90.0°	97.3°
O2'	C1	H4	H5	90.0°	120.0°
O2'	C1	H4	H6	90.0°	120.0°
O2'	C1	H5	H6	90.0°	120.0°
C1	O2'	C2'	H8	90.0°	26.3°
C2	N3	C4	N4	90.0°	179.8°
C2	N3	C4	C5	90.0°	0.0°
N3	C2	N1	C1'	90.0°	180.0°
N3	C2	N1	C6	90.0°	0.1°
C4	N3	C2	N1	90.0°	0.1°
N3	C4	N4	C5	90.0°	179.7°
N3	C4	N4	C7	90.0°	0.2°
N3	C4	C5	C6	90.0°	0.0°
N3	C4	C5	H1	90.0°	180.0°
N3	C4	N4	H3	90.0°	179.7°
C2	N1	C1'	C6	90.0°	179.9°
C2	N1	C1'	C2'	90.0°	65.1°
C2	N1	C1'	O4'	90.0°	49.0°
C2	N1	C6	C5	90.0°	0.0°
C2	N1	C6	H2	90.0°	179.9°
C2	N1	C1'	H7	90.0°	172.1°
C4	N4	C7	H3	90.0°	179.9°
C4	N4	C7	O7	90.0°	0.1°
C4	N4	C7	CM7	90.0°	180.0°
N4	C4	C5	C6	90.0°	179.7°
N4	C4	C5	H1	90.0°	0.3°
C7	N4	C4	C5	90.0°	180.0°
N4	C7	O7	CM7	90.0°	179.9°
N4	C7	CM7	H13	90.0°	90.0°
N4	C7	CM7	H14	90.0°	150.0°
N4	C7	CM7	H15	90.0°	30.1°
C4	C5	C6	N1	90.0°	0.0°
C4	C5	C6	H1	90.0°	179.9°
C4	C5	C6	H2	90.0°	179.9°
C5	C4	N4	H3	90.0°	0.0°
O2'	C2'	C1'	N1	90.0°	86.3°
O2'	C2'	C1'	C3'	90.0°	118.2°
O2'	C2'	C1'	H8	90.0°	123.7°
O2'	C2'	C1'	O4'	90.0°	155.2°
O2'	C2'	C3'	H8	90.0°	123.6°
O2'	C2'	C3'	C4'	90.0°	139.1°
O2'	C2'	C3'	O3'	90.0°	20.4°
C2'	O2'	C1	H4	90.0°	180.0°
C2'	O2'	C1	H5	90.0°	59.9°
C2'	O2'	C1	H6	90.0°	60.0°
O2'	C2'	C1'	H7	90.0°	36.5°
O2'	C2'	C3'	H9	90.0°	102.3°
N1	C1'	C2'	O4'	90.0°	118.5°
N1	C1'	C2'	H7	90.0°	122.8°
N1	C1'	O4'	H7	90.0°	123.0°
N1	C1'	C2'	C3'	90.0°	155.5°
C1'	N1	C6	C5	90.0°	179.9°
N1	C1'	O4'	C4'	90.0°	158.5°
C1'	N1	C6	H2	90.0°	0.0°
N1	C1'	C2'	H8	90.0°	37.4°
C6	N1	C1'	C2'	90.0°	115.0°
C6	N1	C1'	O4'	90.0°	130.9°
N1	C6	C5	H2	90.0°	179.9°
N1	C6	C5	H1	90.0°	179.9°
C6	N1	C1'	H7	90.0°	7.8°
C2'	C1'	O4'	H7	90.0°	118.5°
C1'	C2'	C3'	H8	90.0°	118.2°
C2'	C1'	O4'	C4'	90.0°	40.0°
C1'	C2'	C3'	C4'	90.0°	20.9°
C1'	C2'	C3'	O3'	90.0°	97.8°
C1'	C2'	C3'	H9	90.0°	139.5°
O4'	C1'	C2'	C3'	90.0°	37.0°
C1'	O4'	C4'	C3'	90.0°	26.5°
C1'	O4'	C4'	C5'	90.0°	145.9°
O4'	C1'	C2'	H8	90.0°	81.1°
C1'	O4'	C4'	H10	90.0°	93.0°
O7	C7	N4	H3	90.0°	180.0°
O7	C7	CM7	H13	90.0°	89.9°
O7	C7	CM7	H14	90.0°	30.1°
O7	C7	CM7	H15	90.0°	150.0°
C2'	C3'	C4'	O4'	90.0°	2.0°
C2'	C3'	C4'	O3'	90.0°	118.7°
C2'	C3'	C4'	H9	90.0°	118.6°
C2'	C3'	O3'	H9	90.0°	122.6°
C2'	C3'	C4'	C5'	90.0°	121.5°
C3'	C2'	C1'	H7	90.0°	81.7°
C2'	C3'	C4'	H10	90.0°	117.6°
C2'	C3'	O3'	H16	90.0°	180.0°
CM7	C7	N4	H3	90.0°	0.1°
C7	CM7	H13	H14	90.0°	120.0°
C7	CM7	H13	H15	90.0°	120.1°
C7	CM7	H14	H15	90.0°	120.0°
O4'	C4'	C3'	C5'	90.0°	119.5°
O4'	C4'	C3'	H10	90.0°	119.6°
O4'	C4'	C3'	O3'	90.0°	120.7°
O4'	C4'	C5'	H10	90.0°	121.1°
O4'	C4'	C5'	O5'	90.0°	67.1°
C4'	O4'	C1'	H7	90.0°	78.5°
O4'	C4'	C3'	H9	90.0°	116.6°
O4'	C4'	C5'	H11	90.0°	172.9°
O4'	C4'	C5'	H12	90.0°	52.8°
C4'	C3'	O3'	H9	90.0°	122.6°
C3'	C4'	C5'	H10	90.0°	121.0°
C3'	C4'	C5'	O5'	90.0°	175.0°
C4'	C3'	C2'	H8	90.0°	97.3°
C3'	C4'	C5'	H11	90.0°	55.0°
C3'	C4'	C5'	H12	90.0°	65.0°
C4'	C3'	O3'	H16	90.0°	65.2°
O3'	C3'	C4'	C5'	90.0°	119.9°
O3'	C3'	C2'	H8	90.0°	144.0°
O3'	C3'	C4'	H10	90.0°	1.1°
C4'	C5'	O5'	H11	90.0°	120.0°
C4'	C5'	O5'	H12	90.0°	119.9°
C4'	C5'	O5'	P	90.0°	180.0°
C5'	C4'	C3'	H9	90.0°	2.8°
C4'	C5'	H11	H12	90.0°	119.9°
C5'	O5'	P	OP1	90.0°	65.0°
C5'	O5'	P	OP2	90.0°	55.0°
O5'	C5'	C4'	H10	90.0°	54.0°
O5'	C5'	H11	H12	90.0°	120.1°
C5'	O5'	P	OP3	90.0°	175.0°
O5'	P	OP1	OP2	90.0°	120.0°
O5'	P	OP1	OP3	90.0°	120.0°
O5'	P	OP2	OP3	90.0°	120.1°
P	O5'	C5'	H11	90.0°	60.0°
P	O5'	C5'	H12	90.0°	60.1°
O5'	P	OP1	H17	90.0°	60.1°
O5'	P	OP3	H18	90.0°	180.0°
OP1	P	OP2	OP3	90.0°	120.0°
OP1	P	OP3	H18	90.0°	60.0°
OP2	P	OP1	H17	90.0°	180.0°
OP2	P	OP3	H18	90.0°	60.0°
H1	C5	C6	H2	90.0°	0.0°
H4	C1	H5	H6	90.0°	120.0°
H7	C1'	C2'	H8	90.0°	160.2°
H8	C2'	C3'	H9	90.0°	21.3°
H9	C3'	C4'	H10	90.0°	123.8°
H9	C3'	O3'	H16	90.0°	57.4°
H10	C4'	C5'	H11	90.0°	66.0°
H10	C4'	C5'	H12	90.0°	174.0°
H13	CM7	H14	H15	90.0°	119.9°
H17	OP1	P	OP3	90.0°	60.0°

Release date:	2020-02-19
Definition date:	2019-08-15
Last modified:	2020-02-14
Release status:	REL
Processing site:	EBI