LH6
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CAL | CAJ | sing | 1.51Å | 1.53Å | |
| CAJ | CAI | sing | 1.47Å | 1.53Å | |
| CAJ | CAK | doub | 1.33Å | 1.53Å | |
| CAI | CAH | doub | 1.35Å | 1.53Å | |
| CZ3 | CH2 | doub | 1.38Å | 1.38Å | Aromatic |
| CZ3 | CE3 | sing | 1.39Å | 1.39Å | Aromatic |
| CH2 | CZ2 | sing | 1.38Å | 1.38Å | Aromatic |
| CAG | N | sing | 1.47Å | 1.47Å | |
| CAH | CE3 | sing | 1.47Å | 1.39Å | |
| CE3 | CD2 | doub | 1.41Å | 1.35Å | Aromatic |
| CZ2 | CE2 | doub | 1.39Å | 1.33Å | Aromatic |
| N | CA | sing | 1.47Å | 1.47Å | |
| CE2 | CD2 | sing | 1.41Å | 1.34Å | Aromatic |
| CE2 | NE1 | sing | 1.38Å | 1.33Å | Aromatic |
| CD2 | CG | sing | 1.46Å | 1.35Å | Aromatic |
| O | C | doub | 1.21Å | 1.25Å | |
| NE1 | CD1 | sing | 1.37Å | 1.32Å | Aromatic |
| CG | CB | sing | 1.51Å | 1.54Å | |
| CG | CD1 | doub | 1.34Å | 1.32Å | Aromatic |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| C | OXT | sing | 1.34Å | 1.25Å | |
| N | H1 | sing | 1.01Å | 1.00Å | |
| CA | H3 | sing | 1.09Å | 1.10Å | |
| CB | H4 | sing | 1.09Å | 1.10Å | |
| CB | H5 | sing | 1.09Å | 1.10Å | |
| CD1 | H6 | sing | 1.08Å | 1.08Å | |
| NE1 | H7 | sing | 0.97Å | 1.00Å | |
| CZ2 | H8 | sing | 1.08Å | 1.08Å | |
| CZ3 | H9 | sing | 1.08Å | 1.08Å | |
| CH2 | H10 | sing | 1.08Å | 1.08Å | |
| OXT | H11 | sing | 0.97Å | 0.95Å | |
| CAG | H12 | sing | 1.09Å | 1.10Å | |
| CAG | H13 | sing | 1.09Å | 1.10Å | |
| CAG | H14 | sing | 1.09Å | 1.10Å | |
| CAH | H15 | sing | 1.08Å | 1.08Å | |
| CAI | H17 | sing | 1.08Å | 1.08Å | |
| CAK | H20 | sing | 1.08Å | 1.08Å | |
| CAK | H21 | sing | 1.08Å | 1.08Å | |
| CAL | H23 | sing | 1.09Å | 1.10Å | |
| CAL | H24 | sing | 1.09Å | 1.10Å | |
| CAL | H25 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CAL | CAJ | CAI | 120.3° | 120.0° |
| CAL | CAJ | CAK | 119.9° | 120.0° |
| CAJ | CAL | H23 | 109.5° | 109.5° |
| CAJ | CAL | H24 | 109.5° | 109.5° |
| CAJ | CAL | H25 | 109.5° | 109.5° |
| CAI | CAJ | CAK | 119.8° | 120.0° |
| CAJ | CAI | CAH | 114.0° | 120.0° |
| CAJ | CAI | H17 | 123.0° | 120.0° |
| CAJ | CAK | H20 | 120.0° | 119.9° |
| CAJ | CAK | H21 | 120.0° | 120.0° |
| CAI | CAH | CE3 | 117.0° | 119.9° |
| CAI | CAH | H15 | 121.5° | 120.0° |
| CAH | CAI | H17 | 123.0° | 120.1° |
| CH2 | CZ3 | CE3 | 119.4° | 120.2° |
| CZ3 | CH2 | CZ2 | 117.8° | 120.8° |
| CH2 | CZ3 | H9 | 120.3° | 119.9° |
| CZ3 | CH2 | H10 | 121.1° | 119.6° |
| CZ3 | CE3 | CAH | 117.1° | 120.4° |
| CZ3 | CE3 | CD2 | 120.3° | 119.3° |
| CE3 | CZ3 | H9 | 120.3° | 119.9° |
| CH2 | CZ2 | CE2 | 120.9° | 120.3° |
| CH2 | CZ2 | H8 | 119.6° | 119.9° |
| CZ2 | CH2 | H10 | 121.1° | 119.5° |
| CAG | N | CA | 110.2° | 111.0° |
| CAG | N | H1 | 109.3° | 111.0° |
| N | CAG | H12 | 109.5° | 109.5° |
| N | CAG | H13 | 109.5° | 109.5° |
| N | CAG | H14 | 109.5° | 109.5° |
| CAH | CE3 | CD2 | 122.5° | 120.3° |
| CE3 | CAH | H15 | 121.5° | 120.0° |
| CE3 | CD2 | CE2 | 119.7° | 119.8° |
| CE3 | CD2 | CG | 135.0° | 134.0° |
| CZ2 | CE2 | CD2 | 121.8° | 119.5° |
| CZ2 | CE2 | NE1 | 129.3° | 133.3° |
| CE2 | CZ2 | H8 | 119.5° | 119.8° |
| N | CA | CB | 111.5° | 109.5° |
| N | CA | C | 109.9° | 109.4° |
| CA | N | H1 | 109.3° | 111.0° |
| N | CA | H3 | 109.2° | 109.4° |
| CD2 | CE2 | NE1 | 108.8° | 107.1° |
| CE2 | CD2 | CG | 105.3° | 106.2° |
| CE2 | NE1 | CD1 | 108.8° | 109.8° |
| CE2 | NE1 | H7 | 125.6° | 125.1° |
| CD2 | CG | CB | 128.2° | 126.5° |
| CD2 | CG | CD1 | 110.2° | 107.0° |
| O | C | CA | 117.4° | 120.0° |
| O | C | OXT | 125.7° | 120.0° |
| NE1 | CD1 | CG | 106.9° | 109.9° |
| NE1 | CD1 | H6 | 126.6° | 125.1° |
| CD1 | NE1 | H7 | 125.6° | 125.1° |
| CB | CG | CD1 | 121.6° | 126.5° |
| CG | CB | CA | 109.9° | 109.5° |
| CG | CB | H4 | 109.4° | 109.5° |
| CG | CB | H5 | 109.4° | 109.4° |
| CG | CD1 | H6 | 126.6° | 125.1° |
| CB | CA | C | 109.3° | 109.5° |
| CB | CA | H3 | 108.4° | 109.5° |
| CA | CB | H4 | 109.4° | 109.5° |
| CA | CB | H5 | 109.3° | 109.5° |
| CA | C | OXT | 116.9° | 120.0° |
| C | CA | H3 | 108.4° | 109.5° |
| C | OXT | H11 | 109.5° | 117.0° |
| H4 | CB | H5 | 109.5° | 109.4° |
| H12 | CAG | H13 | 109.4° | 109.5° |
| H12 | CAG | H14 | 109.5° | 109.4° |
| H13 | CAG | H14 | 109.5° | 109.5° |
| H20 | CAK | H21 | 120.0° | 120.0° |
| H23 | CAL | H24 | 109.5° | 109.4° |
| H23 | CAL | H25 | 109.5° | 109.4° |
| H24 | CAL | H25 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CAL | CAJ | CAI | CAK | 179.3° | 179.9° |
| CAL | CAJ | CAI | CAH | 179.3° | 5.5° |
| CAL | CAJ | CAI | H17 | 0.7° | 174.5° |
| CAL | CAJ | CAK | H20 | 179.3° | 180.0° |
| CAL | CAJ | CAK | H21 | 0.7° | 0.1° |
| CAJ | CAL | H23 | H24 | 120.0° | 120.0° |
| CAJ | CAL | H23 | H25 | 120.0° | 120.0° |
| CAJ | CAL | H24 | H25 | 120.0° | 120.0° |
| CAJ | CAI | CAH | H17 | 180.0° | 180.0° |
| CAJ | CAI | CAH | CE3 | 180.0° | 174.9° |
| CAJ | CAI | CAH | H15 | 0.0° | 5.2° |
| CAI | CAJ | CAK | H20 | 0.0° | 0.1° |
| CAI | CAJ | CAK | H21 | 180.0° | 180.0° |
| CAI | CAJ | CAL | H23 | 180.0° | 84.8° |
| CAI | CAJ | CAL | H24 | 60.0° | 155.2° |
| CAI | CAJ | CAL | H25 | 60.0° | 35.1° |
| CAK | CAJ | CAI | CAH | 0.0° | 174.6° |
| CAK | CAJ | CAI | H17 | 180.0° | 5.4° |
| CAJ | CAK | H20 | H21 | 180.0° | 179.9° |
| CAK | CAJ | CAL | H23 | 0.7° | 95.2° |
| CAK | CAJ | CAL | H24 | 120.7° | 24.7° |
| CAK | CAJ | CAL | H25 | 119.3° | 144.8° |
| CAI | CAH | CE3 | CZ3 | 1.7° | 15.7° |
| CAI | CAH | CE3 | H15 | 180.0° | 179.9° |
| CAI | CAH | CE3 | CD2 | 176.6° | 164.3° |
| CH2 | CZ3 | CE3 | H9 | 180.0° | 179.9° |
| CZ3 | CH2 | CZ2 | H10 | 180.0° | 179.8° |
| CH2 | CZ3 | CE3 | CAH | 179.5° | 179.9° |
| CH2 | CZ3 | CE3 | CD2 | 1.3° | 0.1° |
| CZ3 | CH2 | CZ2 | CE2 | 0.2° | 0.1° |
| CZ3 | CH2 | CZ2 | H8 | 179.8° | 179.9° |
| CE3 | CZ3 | CH2 | CZ2 | 0.8° | 0.1° |
| CZ3 | CE3 | CAH | CD2 | 178.2° | 180.0° |
| CZ3 | CE3 | CD2 | CE2 | 1.1° | 0.0° |
| CZ3 | CE3 | CD2 | CG | 179.7° | 180.0° |
| CE3 | CZ3 | CH2 | H10 | 179.2° | 180.0° |
| CZ3 | CE3 | CAH | H15 | 178.3° | 164.2° |
| CH2 | CZ2 | CE2 | H8 | 180.0° | 180.0° |
| CH2 | CZ2 | CE2 | CD2 | 0.0° | 0.0° |
| CH2 | CZ2 | CE2 | NE1 | 180.0° | 179.8° |
| CZ2 | CH2 | CZ3 | H9 | 179.2° | 180.0° |
| CAG | N | CA | H1 | 120.1° | 123.9° |
| CAG | N | CA | CB | 178.2° | 157.6° |
| CAG | N | CA | C | 60.4° | 82.4° |
| CAG | N | CA | H3 | 58.4° | 37.6° |
| N | CAG | H12 | H13 | 120.0° | 120.1° |
| N | CAG | H12 | H14 | 120.0° | 120.0° |
| N | CAG | H13 | H14 | 120.0° | 120.0° |
| CAH | CE3 | CD2 | CE2 | 179.2° | 180.0° |
| CAH | CE3 | CD2 | CG | 1.5° | 0.0° |
| CAH | CE3 | CZ3 | H9 | 0.5° | 0.1° |
| CE3 | CAH | CAI | H17 | 0.0° | 5.1° |
| CE3 | CD2 | CE2 | CZ2 | 0.5° | 0.0° |
| CE3 | CD2 | CE2 | CG | 179.4° | 180.0° |
| CE3 | CD2 | CE2 | NE1 | 179.6° | 179.8° |
| CE3 | CD2 | CG | CB | 0.8° | 0.0° |
| CE3 | CD2 | CG | CD1 | 179.5° | 179.8° |
| CD2 | CE3 | CZ3 | H9 | 178.7° | 180.0° |
| CD2 | CE3 | CAH | H15 | 3.4° | 15.8° |
| CZ2 | CE2 | CD2 | NE1 | 179.9° | 179.8° |
| CZ2 | CE2 | CD2 | CG | 179.9° | 180.0° |
| CZ2 | CE2 | NE1 | CD1 | 180.0° | 179.8° |
| CZ2 | CE2 | NE1 | H7 | 0.0° | 0.1° |
| CE2 | CZ2 | CH2 | H10 | 179.7° | 179.9° |
| N | CA | C | O | 40.7° | 28.4° |
| N | CA | CB | CG | 58.8° | 66.3° |
| N | CA | CB | C | 121.7° | 119.9° |
| N | CA | CB | H3 | 120.3° | 120.0° |
| N | CA | C | H3 | 119.3° | 119.9° |
| N | CA | C | OXT | 141.0° | 151.6° |
| N | CA | CB | H4 | 178.9° | 53.7° |
| N | CA | CB | H5 | 61.3° | 173.7° |
| CA | N | CAG | H12 | 180.0° | 175.5° |
| CA | N | CAG | H13 | 60.0° | 55.5° |
| CA | N | CAG | H14 | 60.0° | 64.6° |
| CD2 | CE2 | NE1 | CD1 | 0.1° | 0.1° |
| CE2 | CD2 | CG | CB | 179.9° | 180.0° |
| CE2 | CD2 | CG | CD1 | 0.2° | 0.2° |
| CD2 | CE2 | NE1 | H7 | 179.9° | 179.8° |
| CD2 | CE2 | CZ2 | H8 | 180.0° | 180.0° |
| NE1 | CE2 | CD2 | CG | 0.2° | 0.2° |
| CE2 | NE1 | CD1 | H7 | 180.0° | 179.9° |
| CE2 | NE1 | CD1 | CG | 0.0° | 0.1° |
| CE2 | NE1 | CD1 | H6 | 180.0° | 179.9° |
| NE1 | CE2 | CZ2 | H8 | 0.0° | 0.2° |
| CD2 | CG | CD1 | NE1 | 0.2° | 0.2° |
| CD2 | CG | CB | CD1 | 179.7° | 179.7° |
| CD2 | CG | CB | CA | 113.8° | 86.0° |
| CD2 | CG | CB | H4 | 126.2° | 153.9° |
| CD2 | CG | CB | H5 | 6.3° | 34.0° |
| CD2 | CG | CD1 | H6 | 179.8° | 179.8° |
| O | C | CA | CB | 82.0° | 91.6° |
| O | C | CA | OXT | 178.3° | 180.0° |
| O | C | CA | H3 | 160.0° | 148.3° |
| O | C | OXT | H11 | 0.0° | 0.0° |
| NE1 | CD1 | CG | CB | 179.9° | 180.0° |
| NE1 | CD1 | CG | H6 | 180.0° | 179.9° |
| CG | CB | CA | H4 | 120.1° | 120.1° |
| CG | CB | CA | H5 | 120.0° | 119.9° |
| CG | CB | CA | C | 179.5° | 173.7° |
| CG | CB | CA | H3 | 61.5° | 53.7° |
| CG | CB | H4 | H5 | 119.8° | 119.9° |
| CB | CG | CD1 | H6 | 0.1° | 0.0° |
| CD1 | CG | CB | CA | 65.9° | 94.3° |
| CD1 | CG | CB | H4 | 54.2° | 25.8° |
| CD1 | CG | CB | H5 | 174.0° | 145.7° |
| CG | CD1 | NE1 | H7 | 180.0° | 180.0° |
| CB | CA | C | H3 | 118.0° | 120.1° |
| CB | CA | C | OXT | 96.4° | 88.4° |
| CB | CA | N | H1 | 58.1° | 33.7° |
| CA | CB | H4 | H5 | 119.8° | 120.0° |
| C | CA | N | H1 | 179.5° | 153.7° |
| C | CA | CB | H4 | 59.4° | 66.2° |
| C | CA | CB | H5 | 60.5° | 53.8° |
| CA | C | OXT | H11 | 178.2° | 180.0° |
| OXT | C | CA | H3 | 21.7° | 31.7° |
| H1 | N | CA | H3 | 61.7° | 86.3° |
| H1 | N | CAG | H12 | 59.9° | 51.6° |
| H1 | N | CAG | H13 | 60.1° | 68.4° |
| H1 | N | CAG | H14 | 179.9° | 171.5° |
| H3 | CA | CB | H4 | 58.6° | 173.7° |
| H3 | CA | CB | H5 | 178.5° | 66.3° |
| H6 | CD1 | NE1 | H7 | 0.0° | 0.0° |
| H8 | CZ2 | CH2 | H10 | 0.2° | 0.1° |
| H9 | CZ3 | CH2 | H10 | 0.9° | 0.2° |
| H12 | CAG | H13 | H14 | 120.0° | 119.9° |
| H15 | CAH | CAI | H17 | 180.0° | 174.8° |
| H23 | CAL | H24 | H25 | 120.0° | 120.0° |
