LGD
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | HN1 | sing | 1.02Å | 1.00Å | |
N1 | C2 | sing | 1.38Å | 1.41Å | Aromatic |
N1 | C10 | sing | 1.41Å | 1.41Å | Aromatic |
C2 | O21 | doub | 1.23Å | 1.22Å | |
C2 | C3 | sing | 1.49Å | 1.45Å | Aromatic |
C3 | H3 | sing | 1.09Å | 1.08Å | |
C3 | C4 | doub | 1.34Å | 1.47Å | Aromatic |
C4 | C5 | sing | 1.48Å | 1.48Å | Aromatic |
C4 | C11 | sing | 1.50Å | 1.61Å | |
F1 | C11 | sing | 1.35Å | 1.34Å | |
F2 | C11 | sing | 1.35Å | 1.37Å | |
F3 | C11 | sing | 1.35Å | 1.34Å | |
C5 | C10 | doub | 1.40Å | 1.49Å | Aromatic |
C5 | C6 | sing | 1.40Å | 1.45Å | Aromatic |
C6 | C7 | doub | 1.40Å | 1.45Å | Aromatic |
C6 | H6 | sing | 1.09Å | 1.08Å | |
C7 | C8 | sing | 1.39Å | 1.48Å | Aromatic |
C7 | N13 | sing | 1.41Å | 1.53Å | |
C8 | C9 | doub | 1.39Å | 1.44Å | Aromatic |
C8 | H8 | sing | 1.09Å | 1.08Å | |
C9 | C10 | sing | 1.40Å | 1.44Å | Aromatic |
C9 | H9 | sing | 1.09Å | 1.08Å | |
C12 | N13 | sing | 1.45Å | 1.52Å | |
C12 | H121 | sing | 1.09Å | 1.10Å | |
C12 | H122 | sing | 1.09Å | 1.10Å | |
C12 | C15 | sing | 1.51Å | 1.43Å | |
N13 | C14 | sing | 1.45Å | 1.48Å | |
C14 | H141 | sing | 1.09Å | 1.10Å | |
C14 | H142 | sing | 1.09Å | 1.10Å | |
C14 | C16 | sing | 1.51Å | 1.26Å | |
F4 | C15 | sing | 1.35Å | 1.32Å | |
F5 | C15 | sing | 1.35Å | 1.27Å | |
F6 | C15 | sing | 1.35Å | 1.34Å | |
F7 | C16 | sing | 1.35Å | 1.31Å | |
F8 | C16 | sing | 1.35Å | 1.25Å | |
F9 | C16 | sing | 1.35Å | 1.34Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
HN1 | N1 | C2 | 118.7° | 118.6° |
HN1 | N1 | C10 | 118.7° | 118.0° |
C2 | N1 | C10 | 122.6° | 123.4° |
N1 | C2 | O21 | 118.8° | 123.8° |
N1 | C2 | C3 | 120.2° | 116.3° |
N1 | C10 | C5 | 119.5° | 119.9° |
N1 | C10 | C9 | 119.9° | 118.9° |
O21 | C2 | C3 | 121.1° | 120.0° |
C2 | C3 | H3 | 119.8° | 116.3° |
C2 | C3 | C4 | 120.3° | 122.3° |
H3 | C3 | C4 | 119.9° | 121.4° |
C3 | C4 | C5 | 118.7° | 119.4° |
C3 | C4 | C11 | 118.8° | 120.8° |
C5 | C4 | C11 | 122.5° | 119.8° |
C4 | C5 | C10 | 118.7° | 118.7° |
C4 | C5 | C6 | 123.7° | 123.1° |
C4 | C11 | F1 | 107.7° | 110.8° |
C4 | C11 | F2 | 110.4° | 110.9° |
C4 | C11 | F3 | 114.2° | 111.0° |
F1 | C11 | F2 | 107.3° | 108.0° |
F1 | C11 | F3 | 105.8° | 108.0° |
F2 | C11 | F3 | 111.0° | 108.0° |
C10 | C5 | C6 | 117.6° | 118.2° |
C5 | C10 | C9 | 120.6° | 121.2° |
C5 | C6 | C7 | 123.3° | 120.7° |
C5 | C6 | H6 | 118.3° | 120.8° |
C7 | C6 | H6 | 118.3° | 118.5° |
C6 | C7 | C8 | 116.8° | 120.3° |
C6 | C7 | N13 | 119.2° | 119.9° |
C8 | C7 | N13 | 123.9° | 119.8° |
C7 | C8 | C9 | 121.8° | 119.8° |
C7 | C8 | H8 | 119.1° | 120.7° |
C7 | N13 | C12 | 122.7° | 120.4° |
C7 | N13 | C14 | 121.9° | 120.4° |
C9 | C8 | H8 | 119.1° | 119.5° |
C8 | C9 | C10 | 119.9° | 119.8° |
C8 | C9 | H9 | 120.1° | 119.4° |
C10 | C9 | H9 | 120.0° | 120.8° |
N13 | C12 | H121 | 109.6° | 107.6° |
N13 | C12 | H122 | 109.6° | 107.6° |
N13 | C12 | C15 | 109.2° | 111.6° |
C12 | N13 | C14 | 114.6° | 119.2° |
H121 | C12 | H122 | 109.2° | 108.5° |
H121 | C12 | C15 | 109.6° | 110.7° |
H122 | C12 | C15 | 109.6° | 110.7° |
C12 | C15 | F4 | 97.1° | 110.5° |
C12 | C15 | F5 | 118.8° | 111.4° |
C12 | C15 | F6 | 119.9° | 111.4° |
N13 | C14 | H141 | 103.7° | 107.6° |
N13 | C14 | H142 | 99.3° | 107.6° |
N13 | C14 | C16 | 128.0° | 111.6° |
H141 | C14 | H142 | 125.5° | 108.5° |
H141 | C14 | C16 | 103.7° | 110.7° |
H142 | C14 | C16 | 99.4° | 110.7° |
C14 | C16 | F7 | 100.0° | 110.5° |
C14 | C16 | F8 | 114.8° | 111.4° |
C14 | C16 | F9 | 121.5° | 111.4° |
F4 | C15 | F5 | 103.6° | 107.6° |
F4 | C15 | F6 | 110.6° | 107.6° |
F5 | C15 | F6 | 105.2° | 108.1° |
F7 | C16 | F8 | 105.8° | 107.7° |
F7 | C16 | F9 | 107.8° | 107.6° |
F8 | C16 | F9 | 105.6° | 108.1° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
HN1 | N1 | C2 | C10 | 180.0° | 179.9° |
HN1 | N1 | C2 | O21 | 0.1° | 0.1° |
HN1 | N1 | C2 | C3 | 179.7° | 180.0° |
HN1 | N1 | C10 | C5 | 179.9° | 180.0° |
HN1 | N1 | C10 | C9 | 0.4° | 0.1° |
N1 | C2 | O21 | C3 | 179.6° | 179.9° |
N1 | C2 | C3 | H3 | 179.7° | 180.0° |
N1 | C2 | C3 | C4 | 0.3° | 0.1° |
C2 | N1 | C10 | C5 | 0.0° | 0.0° |
C2 | N1 | C10 | C9 | 179.6° | 180.0° |
C10 | N1 | C2 | O21 | 179.9° | 179.9° |
C10 | N1 | C2 | C3 | 0.2° | 0.1° |
N1 | C10 | C5 | C4 | 0.1° | 0.0° |
N1 | C10 | C5 | C9 | 179.6° | 180.0° |
N1 | C10 | C5 | C6 | 179.7° | 180.0° |
N1 | C10 | C9 | C8 | 179.8° | 179.9° |
N1 | C10 | C9 | H9 | 0.2° | 0.0° |
O21 | C2 | C3 | H3 | 0.1° | 0.1° |
O21 | C2 | C3 | C4 | 179.9° | 180.0° |
C2 | C3 | H3 | C4 | 180.0° | 179.9° |
C2 | C3 | C4 | C5 | 0.1° | 0.1° |
C2 | C3 | C4 | C11 | 179.4° | 179.9° |
H3 | C3 | C4 | C5 | 179.9° | 180.0° |
H3 | C3 | C4 | C11 | 0.6° | 0.0° |
C3 | C4 | C5 | C11 | 179.3° | 180.0° |
C3 | C4 | C11 | F1 | 116.1° | 180.0° |
C3 | C4 | C11 | F2 | 0.8° | 60.1° |
C3 | C4 | C11 | F3 | 126.7° | 60.0° |
C3 | C4 | C5 | C10 | 0.1° | 0.0° |
C3 | C4 | C5 | C6 | 179.8° | 180.0° |
C5 | C4 | C11 | F1 | 63.2° | 0.0° |
C5 | C4 | C11 | F2 | 179.9° | 119.9° |
C5 | C4 | C11 | F3 | 54.0° | 120.0° |
C4 | C5 | C10 | C6 | 179.9° | 180.0° |
C4 | C5 | C6 | C7 | 179.5° | 180.0° |
C4 | C5 | C6 | H6 | 0.5° | 0.1° |
C4 | C5 | C10 | C9 | 179.4° | 180.0° |
C4 | C11 | F1 | F2 | 118.9° | 121.7° |
C4 | C11 | F1 | F3 | 122.5° | 121.8° |
C4 | C11 | F2 | F3 | 127.7° | 121.8° |
C11 | C4 | C5 | C10 | 179.2° | 180.0° |
C11 | C4 | C5 | C6 | 0.9° | 0.1° |
F1 | C11 | F2 | F3 | 115.1° | 116.6° |
C10 | C5 | C6 | C7 | 0.6° | 0.0° |
C10 | C5 | C6 | H6 | 179.4° | 179.9° |
C5 | C10 | C9 | C8 | 0.2° | 0.0° |
C5 | C10 | C9 | H9 | 179.8° | 180.0° |
C5 | C6 | C7 | H6 | 180.0° | 179.9° |
C5 | C6 | C7 | C8 | 0.1° | 0.0° |
C5 | C6 | C7 | N13 | 179.8° | 180.0° |
C6 | C5 | C10 | C9 | 0.7° | 0.0° |
C6 | C7 | C8 | N13 | 179.9° | 180.0° |
C6 | C7 | C8 | C9 | 0.4° | 0.0° |
C6 | C7 | C8 | H8 | 179.6° | 180.0° |
C6 | C7 | N13 | C12 | 177.3° | 120.0° |
C6 | C7 | N13 | C14 | 13.5° | 60.6° |
H6 | C6 | C7 | C8 | 179.9° | 179.9° |
H6 | C6 | C7 | N13 | 0.2° | 0.1° |
C7 | C8 | C9 | H8 | 180.0° | 180.0° |
C7 | C8 | C9 | C10 | 0.3° | 0.0° |
C7 | C8 | C9 | H9 | 179.6° | 180.0° |
C8 | C7 | N13 | C12 | 2.7° | 60.0° |
C8 | C7 | N13 | C14 | 166.5° | 119.4° |
N13 | C7 | C8 | C9 | 179.7° | 180.0° |
N13 | C7 | C8 | H8 | 0.3° | 0.0° |
C7 | N13 | C12 | C14 | 169.9° | 179.4° |
C7 | N13 | C12 | H121 | 159.8° | 40.0° |
C7 | N13 | C12 | H122 | 40.0° | 156.7° |
C7 | N13 | C12 | C15 | 80.2° | 81.7° |
C7 | N13 | C14 | H141 | 26.4° | 40.0° |
C7 | N13 | C14 | H142 | 156.6° | 156.7° |
C7 | N13 | C14 | C16 | 93.6° | 81.7° |
C8 | C9 | C10 | H9 | 180.0° | 180.0° |
H8 | C8 | C9 | C10 | 179.7° | 180.0° |
H8 | C8 | C9 | H9 | 0.3° | 0.0° |
N13 | C12 | H121 | H122 | 120.1° | 116.2° |
N13 | C12 | H121 | C15 | 119.8° | 122.2° |
N13 | C12 | H122 | C15 | 119.8° | 122.2° |
C12 | N13 | C14 | H141 | 163.6° | 140.6° |
C12 | N13 | C14 | H142 | 33.3° | 23.9° |
C12 | N13 | C14 | C16 | 76.4° | 97.7° |
N13 | C12 | C15 | F4 | 178.2° | 179.9° |
N13 | C12 | C15 | F5 | 72.0° | 60.6° |
N13 | C12 | C15 | F6 | 59.4° | 60.3° |
H121 | C12 | H122 | C15 | 120.1° | 121.7° |
H121 | C12 | N13 | C14 | 10.1° | 139.4° |
H121 | C12 | C15 | F4 | 58.2° | 60.0° |
H121 | C12 | C15 | F5 | 168.0° | 179.6° |
H121 | C12 | C15 | F6 | 60.6° | 59.5° |
H122 | C12 | N13 | C14 | 130.0° | 22.6° |
H122 | C12 | C15 | F4 | 61.7° | 60.3° |
H122 | C12 | C15 | F5 | 48.1° | 59.3° |
H122 | C12 | C15 | F6 | 179.5° | 179.8° |
C15 | C12 | N13 | C14 | 109.9° | 99.0° |
C12 | C15 | F4 | F5 | 122.0° | 121.9° |
C12 | C15 | F4 | F6 | 125.7° | 121.8° |
C12 | C15 | F5 | F6 | 137.6° | 122.8° |
N13 | C14 | H141 | H142 | 112.3° | 116.1° |
N13 | C14 | H141 | C16 | 135.4° | 122.2° |
N13 | C14 | H142 | C16 | 131.3° | 122.2° |
N13 | C14 | C16 | F7 | 124.6° | 179.9° |
N13 | C14 | C16 | F8 | 122.7° | 60.5° |
N13 | C14 | C16 | F9 | 6.4° | 60.3° |
H141 | C14 | H142 | C16 | 114.4° | 121.6° |
H141 | C14 | C16 | F7 | 115.4° | 60.0° |
H141 | C14 | C16 | F8 | 2.7° | 179.6° |
H141 | C14 | C16 | F9 | 126.4° | 59.6° |
H142 | C14 | C16 | F7 | 14.8° | 60.3° |
H142 | C14 | C16 | F8 | 127.5° | 59.3° |
H142 | C14 | C16 | F9 | 103.3° | 179.9° |
C14 | C16 | F7 | F8 | 119.6° | 121.8° |
C14 | C16 | F7 | F9 | 127.8° | 121.9° |
C14 | C16 | F8 | F9 | 136.6° | 122.7° |
F4 | C15 | F5 | F6 | 116.2° | 116.0° |
F7 | C16 | F8 | F9 | 114.1° | 116.0° |