Summary Geometry PCM/PTM Related PDB entries

LFH

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
FE1	S1	sing	2.33Å	2.12Å
FE1	S2	sing	2.33Å	2.17Å
FE1	C3	sing	1.81Å	1.81Å
FE1	C4	sing	1.81Å	1.83Å
FE1	C5	sing	1.81Å	1.87Å
FE2	S1	sing	2.34Å	2.14Å
FE2	S2	sing	2.33Å	2.14Å
FE2	C5	sing	1.82Å	1.84Å
FE2	C6	sing	1.81Å	1.86Å
FE2	C7	sing	1.81Å	1.83Å
S1	C1	sing	1.81Å	1.65Å
S2	C2	sing	1.81Å	1.64Å
O3	C3	trip	1.22Å	1.18Å
N4	C4	trip	1.25Å	1.14Å
O5	C5	doub	1.22Å	1.22Å
N6	C6	trip	1.25Å	1.17Å
O7	C7	trip	1.22Å	1.20Å
C2	N1	sing	1.47Å	1.47Å
N1	C1	sing	1.47Å	1.48Å
FE2	S	sing	2.33Å	2.43Å
C2	H7	sing	0.97Å	1.10Å
C2	H8	sing	0.97Å	1.10Å
N1	H9	sing	0.93Å	1.00Å
C1	H11	sing	0.97Å	1.10Å
C1	H12	sing	0.97Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
S1	FE1	S2	78.6°	84.4°
S1	FE1	C3	171.0°	172.9°
S1	FE1	C4	87.8°	90.6°
S1	FE1	C5	83.8°	89.3°
FE1	S1	FE2	77.8°	65.3°
FE1	S1	C1	114.7°	107.9°
S2	FE1	C3	96.3°	91.7°
S2	FE1	C4	162.2°	174.0°
S2	FE1	C5	79.8°	90.0°
FE1	S2	FE2	76.7°	65.4°
FE1	S2	C2	114.3°	108.5°
C3	FE1	C4	95.6°	93.0°
C3	FE1	C5	88.0°	96.7°
FE1	C3	O3	175.5°	180.0°
C4	FE1	C5	87.4°	93.3°
FE1	C4	N4	170.9°	180.0°
FE1	C5	FE2	92.5°	87.8°
FE1	C5	O5	136.1°	127.2°
S1	FE2	S2	78.7°	84.3°
S1	FE2	C5	83.8°	89.0°
S1	FE2	C6	166.0°	173.7°
S1	FE2	C7	92.2°	90.7°
FE2	S1	C1	114.6°	118.7°
S1	FE2	S	91.4°	86.0°
S2	FE2	C5	81.2°	89.8°
S2	FE2	C6	97.4°	91.7°
S2	FE2	C7	166.7°	174.9°
FE2	S2	C2	116.4°	117.1°
S2	FE2	S	96.7°	90.6°
C5	FE2	C6	82.2°	95.9°
C5	FE2	C7	88.2°	91.1°
FE2	C5	O5	131.4°	127.6°
C5	FE2	S	175.0°	174.9°
C6	FE2	C7	89.1°	93.2°
FE2	C6	N6	171.8°	180.0°
C6	FE2	S	102.5°	89.2°
FE2	C7	O7	176.6°	180.0°
C7	FE2	S	93.2°	88.0°
S1	C1	N1	111.6°	110.2°
S1	C1	H11	108.9°	108.9°
S1	C1	H12	108.9°	109.3°
S2	C2	N1	110.2°	110.1°
S2	C2	H7	109.3°	109.3°
S2	C2	H8	109.3°	108.9°
C2	N1	C1	118.7°	121.2°
N1	C2	H7	109.3°	109.9°
N1	C2	H8	109.3°	109.4°
C2	N1	H9	107.1°	109.9°
C1	N1	H9	107.1°	109.9°
N1	C1	H11	109.0°	109.4°
N1	C1	H12	109.0°	109.9°
H7	C2	H8	109.5°	109.1°
H11	C1	H12	109.5°	109.1°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
S1	FE1	S2	C3	172.5°	174.0°
S1	FE1	S2	C4	40.9°	33.8°
S1	FE1	S2	C5	85.7°	89.3°
S1	FE1	C3	C4	112.0°	119.6°
S1	FE1	C3	C5	24.8°	146.7°
S1	FE1	C4	C5	83.9°	89.3°
FE1	S1	FE2	C1	111.8°	97.7°
S1	FE1	S2	FE2	49.2°	54.5°
S1	FE1	C5	FE2	37.0°	42.8°
FE1	S1	FE2	C6	25.2°	105.1°
FE1	S1	FE2	C7	120.5°	126.5°
S1	FE1	S2	C2	64.0°	57.5°
S1	FE1	C3	O3	74.7°	14.8°
S1	FE1	C4	N4	28.5°	32.0°
S1	FE1	C5	O5	143.9°	179.6°
FE1	S1	C1	N1	69.0°	13.5°
FE1	S1	FE2	S	146.3°	145.5°
FE1	S1	C1	H11	51.3°	106.5°
FE1	S1	C1	H12	170.6°	134.4°
S2	FE1	C3	C4	166.7°	176.2°
S2	FE1	C3	C5	79.5°	90.2°
S2	FE1	C4	C5	44.0°	122.9°
FE1	S2	FE2	C2	110.8°	99.0°
S2	FE1	C5	FE2	42.4°	41.7°
FE1	S2	FE2	C6	117.9°	130.5°
FE1	S2	FE2	C7	0.7°	65.7°
S2	FE1	S1	C1	62.8°	59.5°
S2	FE1	C3	O3	20.0°	71.3°
S2	FE1	C4	N4	11.4°	65.6°
S2	FE1	C5	O5	136.7°	96.0°
FE1	S2	C2	N1	69.8°	9.6°
FE1	S2	FE2	S	138.5°	140.3°
FE1	S2	C2	H7	170.1°	130.4°
FE1	S2	C2	H8	50.3°	110.4°
C3	FE1	C4	C5	87.7°	96.9°
C3	FE1	S1	FE2	7.0°	111.4°
C3	FE1	S2	FE2	123.3°	131.4°
C3	FE1	C5	FE2	139.2°	133.3°
C3	FE1	S1	C1	118.7°	2.6°
C3	FE1	S2	C2	123.5°	116.5°
C3	FE1	C4	N4	143.1°	154.2°
C3	FE1	C5	O5	39.9°	4.3°
C4	FE1	S1	FE2	119.5°	128.8°
C4	FE1	S2	FE2	8.3°	88.3°
C4	FE1	C5	FE2	125.1°	133.3°
C4	FE1	S1	C1	128.8°	117.2°
C4	FE1	S2	C2	104.9°	23.8°
C4	FE1	C3	O3	173.3°	104.8°
C4	FE1	C5	O5	55.8°	89.1°
FE1	C5	FE2	O5	179.2°	137.3°
FE1	C5	FE2	C6	141.7°	133.3°
FE1	C5	FE2	C7	129.0°	133.3°
C5	FE1	S1	C1	143.6°	149.6°
C5	FE1	S2	C2	149.7°	146.8°
C5	FE1	C3	O3	99.5°	161.5°
C5	FE1	C4	N4	55.4°	57.3°
FE1	C5	FE2	S	21.9°	52.8°
S1	FE2	S2	C5	85.4°	89.0°
S1	FE2	S2	C6	166.3°	175.1°
S1	FE2	S2	C7	47.7°	11.2°
S1	FE2	S2	S	90.1°	85.9°
S1	FE2	C5	C6	178.2°	175.9°
S1	FE2	C5	C7	92.4°	90.7°
S1	FE2	C5	S	14.6°	10.2°
S1	FE2	C6	C7	95.6°	128.2°
S1	FE2	C6	S	171.3°	40.3°
S1	FE2	C7	S	91.5°	85.9°
S1	FE2	S2	C2	62.3°	44.6°
S1	FE2	C5	O5	144.3°	179.9°
S1	FE2	C6	N6	41.5°	8.9°
S1	FE2	C7	O7	17.4°	100.5°
FE2	S1	C1	N1	18.4°	57.6°
FE2	S1	C1	H11	138.7°	177.6°
FE2	S1	C1	H12	101.9°	63.3°
S2	FE2	C5	C6	98.7°	91.7°
S2	FE2	C5	C7	171.9°	174.9°
S2	FE2	C5	S	64.9°	94.4°
S2	FE2	C6	C7	168.4°	178.6°
S2	FE2	C6	S	98.5°	90.6°
S2	FE2	C7	S	138.0°	74.7°
S2	FE2	S1	C1	62.0°	43.2°
S2	FE2	C5	O5	136.3°	95.7°
S2	FE2	C6	N6	114.3°	59.2°
S2	FE2	C7	O7	29.2°	89.3°
FE2	S2	C2	N1	16.9°	61.6°
FE2	S2	C2	H7	103.3°	59.2°
FE2	S2	C2	H8	137.0°	178.4°
C5	FE2	C6	C7	88.4°	91.5°
C5	FE2	C6	S	178.6°	179.5°
C5	FE2	C7	S	175.3°	174.9°
C5	FE2	S1	C1	144.2°	133.1°
C5	FE2	S2	C2	147.7°	133.6°
C5	FE2	C6	N6	34.3°	149.1°
C5	FE2	C7	O7	66.4°	170.5°
C6	FE2	C7	S	102.5°	89.1°
C6	FE2	S1	C1	137.0°	7.4°
C6	FE2	S2	C2	131.3°	130.5°
C6	FE2	C5	O5	37.5°	4.0°
C6	FE2	C7	O7	148.7°	74.5°
C7	FE2	S1	C1	127.8°	135.8°
C7	FE2	S2	C2	110.0°	33.3°
C7	FE2	C5	O5	51.8°	89.4°
C7	FE2	C6	N6	54.1°	119.4°
S1	C1	N1	C2	57.5°	70.7°
S1	C1	N1	H11	120.3°	119.8°
S1	C1	N1	H12	120.3°	120.5°
C1	S1	FE2	S	34.5°	47.8°
S1	C1	N1	H9	63.8°	159.2°
S1	C1	H11	H12	119.0°	119.2°
S2	C2	N1	H7	120.1°	120.4°
S2	C2	N1	H8	120.1°	119.7°
S2	C2	N1	C1	58.0°	73.3°
C2	S2	FE2	S	27.7°	41.3°
S2	C2	H7	H8	119.6°	119.1°
S2	C2	N1	H9	63.3°	156.7°
O5	C5	FE2	S	158.9°	169.9°
N6	C6	FE2	S	147.2°	31.4°
O7	C7	FE2	S	108.9°	14.6°
C2	N1	C1	H9	121.3°	130.0°
N1	C2	H7	H8	119.7°	120.0°
C2	N1	C1	H11	62.8°	169.5°
C2	N1	C1	H12	177.8°	49.8°
C1	N1	C2	H7	178.2°	47.2°
C1	N1	C2	H8	62.1°	167.0°
N1	C1	H11	H12	119.1°	120.3°
H7	C2	N1	H9	56.8°	82.9°
H8	C2	N1	H9	176.6°	37.0°
H9	N1	C1	H11	175.9°	39.5°
H9	N1	C1	H12	56.5°	80.3°

Release date:	2020-07-08
Definition date:	2019-08-12
Last modified:	2026-09-16
Release status:	REL
Processing site:	PDBE
Derived from:	6SG2