Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

LDI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O04C03doub1.21Å1.19Å
C06C07sing1.53Å1.54Å
C06C05sing1.53Å1.45Å
C07N08sing1.47Å1.45Å
C03C05sing1.51Å1.55Å
C03N02sing1.35Å1.44Å
O01N02sing1.42Å1.41Å
C17C18doub1.38Å1.39ÅAromatic
C17C16sing1.38Å1.39ÅAromatic
C05C20sing1.53Å1.45Å
C18C13sing1.38Å1.39ÅAromatic
N08C09sing1.47Å1.23Å
N08C19sing1.47Å1.44Å
C16C15doub1.38Å1.39ÅAromatic
C09C10sing1.53Å1.54Å
N11C10sing1.47Å1.46Å
N11C12sing1.47Å1.47Å
C20C19sing1.53Å1.55Å
C13C12sing1.51Å1.55Å
C13C14doub1.38Å1.40ÅAromatic
C15C14sing1.38Å1.39ÅAromatic
C10H1sing1.09Å1.10Å
C10H2sing1.09Å1.10Å
C15H3sing1.08Å1.08Å
C17H4sing1.08Å1.08Å
C20H5sing1.09Å1.10Å
C20H6sing1.09Å1.10Å
C05H7sing1.09Å1.10Å
C06H8sing1.09Å1.10Å
C06H9sing1.09Å1.10Å
C07H10sing1.09Å1.10Å
C07H11sing1.09Å1.10Å
C09H12sing1.09Å1.10Å
C09H13sing1.09Å1.10Å
C12H14sing1.09Å1.10Å
C12H15sing1.09Å1.10Å
C14H16sing1.08Å1.08Å
C16H17sing1.08Å1.08Å
C18H18sing1.08Å1.08Å
C19H19sing1.09Å1.10Å
C19H20sing1.09Å1.10Å
N02H21sing0.97Å1.00Å
N11H23sing1.01Å1.00Å
O01H25sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O04C03C05123.0°120.0°
O04C03N02115.2°120.1°
C07C06C05115.1°109.3°
C06C07N08115.9°109.5°
C07C06H8108.1°109.5°
C07C06H9108.1°109.5°
C06C07H10107.8°109.5°
C06C07H11107.8°109.5°
C06C05C03110.4°109.6°
C06C05C20113.2°109.1°
C06C05H7107.6°109.6°
C05C06H8108.1°109.5°
C05C06H9108.0°109.4°
C07N08C09112.3°111.0°
C07N08C19114.7°111.2°
N08C07H10107.8°109.4°
N08C07H11107.9°109.4°
C05C03N02121.7°119.9°
C03C05C20111.3°109.5°
C03C05H7106.4°109.5°
C03N02O01120.0°120.0°
C03N02H21120.0°120.1°
O01N02H21120.0°119.9°
N02O01H25109.5°114.0°
C18C17C16120.1°120.0°
C17C18C13120.7°120.0°
C18C17H4119.9°120.0°
C17C18H18119.6°120.0°
C17C16C15119.6°120.0°
C16C17H4119.9°120.0°
C17C16H17120.2°120.0°
C05C20C19118.4°109.3°
C05C20H5107.2°109.5°
C05C20H6107.2°109.5°
C20C05H7107.6°109.5°
C18C13C12120.4°120.0°
C18C13C14118.6°120.1°
C13C18H18119.7°120.0°
C09N08C19113.1°111.0°
N08C09C10111.9°109.5°
N08C09H12108.9°109.4°
N08C09H13108.9°109.5°
N08C19C20117.8°109.5°
N08C19H19107.3°109.4°
N08C19H20107.3°109.4°
C16C15C14120.1°120.1°
C16C15H3120.0°120.0°
C15C16H17120.2°120.1°
C09C10N11114.2°109.5°
C09C10H1108.3°109.5°
C09C10H2108.3°109.4°
C10C09H12108.9°109.5°
C10C09H13108.9°109.5°
C10N11C12111.4°111.0°
N11C10H1108.3°109.5°
N11C10H2108.3°109.5°
C10N11H23109.0°110.9°
N11C12C13113.9°109.5°
N11C12H14108.3°109.5°
N11C12H15108.3°109.5°
C12N11H23109.0°111.0°
C19C20H5107.2°109.5°
C19C20H6107.2°109.5°
C20C19H19107.4°109.5°
C20C19H20107.4°109.5°
C12C13C14121.0°120.0°
C13C12H14108.4°109.5°
C13C12H15108.3°109.4°
C13C14C15120.8°119.9°
C13C14H16119.6°120.1°
C14C15H3119.9°120.0°
C15C14H16119.6°120.0°
H1C10H2109.5°109.4°
H5C20H6109.5°109.5°
H8C06H9109.5°109.5°
H10C07H11109.5°109.5°
H12C09H13109.4°109.5°
H14C12H15109.5°109.5°
H19C19H20109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O04C03C05C0630.0°119.7°
O04C03C05N02179.5°180.0°
O04C03N02O010.9°0.0°
O04C03C05C20156.6°0.0°
O04C03C05H786.5°120.1°
O04C03N02H21179.1°180.0°
C07C06C05H8120.8°120.0°
C07C06C05H9120.8°119.9°
C06C07N08H10120.9°120.0°
C06C07N08H11120.9°120.0°
C07C06C05C03169.9°177.6°
C07C06C05C2044.3°57.7°
C06C07N08C09171.9°174.1°
C06C07N08C1940.9°61.8°
C07C06C05H774.4°62.2°
C07C06H8H9117.5°120.1°
C06C07H10H11117.0°120.1°
C05C06C07N0848.8°59.2°
C06C05C03C20126.6°119.7°
C06C05C03H7116.5°120.2°
C06C05C03N02149.5°60.3°
C06C05C20H7118.8°119.9°
C06C05C20C1935.4°57.7°
C06C05C20H5156.6°177.6°
C06C05C20H685.9°62.3°
C05C06H8H9117.4°120.0°
C05C06C07H10169.7°179.2°
C05C06C07H1172.1°60.8°
C07N08C09C19131.8°124.2°
C07N08C09C10148.0°170.0°
C07N08C19C2031.3°61.8°
N08C07C06H8169.6°60.8°
N08C07C06H972.0°179.1°
N08C07H10H11117.1°119.9°
C07N08C09H1227.7°70.0°
C07N08C09H1391.6°50.0°
C07N08C19H19152.5°58.3°
C07N08C19H2089.9°178.3°
C05C03N02O01179.6°180.0°
C03C05C20H7116.2°120.1°
C03C05C20C19160.4°177.6°
C03C05C20H578.3°62.5°
C03C05C20H639.2°57.6°
C03C05C06H869.3°57.6°
C03C05C06H949.0°62.5°
C05C03N02H210.4°0.0°
C03N02O01H21180.0°180.0°
N02C03C05C2022.9°180.0°
N02C03C05H794.0°59.9°
C03N02O01H250.4°180.0°
C18C17C16H4180.0°180.0°
C17C18C13H18180.0°180.0°
C18C17C16C150.1°0.3°
C17C18C13C12179.6°180.0°
C17C18C13C140.6°0.3°
C18C17C16H17179.9°180.0°
C16C17C18C130.4°0.0°
C17C16C15H17180.0°179.7°
C17C16C15C140.1°0.3°
C17C16C15H3179.9°179.7°
C16C17C18H18179.6°180.0°
C05C20C19N0829.4°59.2°
C05C20C19H5121.3°119.9°
C05C20C19H6121.3°120.0°
C05C20H5H6115.9°120.1°
C20C05C06H8165.2°62.3°
C20C05C06H976.5°177.6°
C05C20C19H19150.5°60.8°
C05C20C19H2091.8°179.2°
C18C13C12N1195.4°90.3°
C18C13C12C14179.8°179.7°
C18C13C14C150.6°0.3°
C13C18C17H4179.6°180.0°
C18C13C12H14144.0°29.7°
C18C13C12H1525.2°149.7°
C18C13C14H16179.4°179.7°
N08C09C10H12120.4°119.9°
N08C09C10H13120.4°120.0°
N08C09C10N11144.1°179.9°
C09N08C19C20161.9°174.1°
N08C09C10H195.2°59.9°
N08C09C10H223.4°60.0°
C09N08C07H1067.2°54.1°
C09N08C07H1151.0°65.8°
N08C09H12H13118.9°120.0°
C09N08C19H1976.9°65.8°
C09N08C19H2040.8°54.1°
C19N08C09C1080.1°65.8°
N08C19C20H19121.2°120.0°
N08C19C20H20121.2°120.0°
N08C19C20H5150.7°179.1°
N08C19C20H691.9°60.8°
C19N08C07H10161.8°178.3°
C19N08C07H1180.1°58.3°
C19N08C09H12159.5°54.2°
C19N08C09H1340.2°174.2°
N08C19H19H20116.2°119.9°
C16C15C14C130.4°0.0°
C16C15C14H3180.0°179.9°
C15C16C17H4179.9°179.7°
C16C15C14H16179.6°180.0°
C09C10N11H1120.7°120.0°
C09C10N11H2120.7°120.0°
C09C10N11C12171.6°180.0°
C09C10H1H2117.8°119.9°
C10C09H12H13118.9°120.0°
C09C10N11H2368.1°56.1°
C10N11C12H23120.3°123.9°
C10N11C12C13178.5°180.0°
N11C10H1H2117.8°120.0°
N11C10C09H1223.7°60.0°
N11C10C09H1395.5°60.0°
C10N11C12H1457.8°60.0°
C10N11C12H1560.9°60.1°
N11C12C13H14120.6°120.0°
N11C12C13H15120.6°120.0°
N11C12C13C1484.8°90.0°
C12N11C10H150.9°60.0°
C12N11C10H267.7°59.9°
N11C12H14H15118.0°120.0°
C19C20H5H6115.9°120.1°
C19C20C05H783.4°62.3°
C20C19H19H20116.3°120.0°
C12C13C14C15179.6°180.0°
C13C12H14H15118.0°120.0°
C12C13C14H160.4°0.0°
C12C13C18H180.4°0.0°
C13C12N11H2361.2°56.1°
C13C14C15H16180.0°180.0°
C13C14C15H3179.6°180.0°
C14C13C12H1435.8°150.0°
C14C13C12H15154.5°30.0°
C14C13C18H18179.4°179.7°
C14C15C16H17179.9°180.0°
H1C10C09H12144.4°60.0°
H1C10C09H1325.2°180.0°
H1C10N11H23171.2°176.1°
H2C10C09H1297.0°179.9°
H2C10C09H13143.8°60.0°
H2C10N11H2352.6°63.9°
H3C15C14H160.4°0.0°
H3C15C16H170.1°0.1°
H4C17C16H170.1°0.0°
H4C17C18H180.4°0.0°
H5C20C05H737.9°57.7°
H5C20C19H1988.2°59.1°
H5C20C19H2029.5°60.9°
H6C20C05H7155.3°177.8°
H6C20C19H1929.3°179.2°
H6C20C19H20146.9°59.2°
H7C05C06H846.4°177.8°
H7C05C06H9164.8°57.7°
H8C06C07H1069.4°59.2°
H8C06C07H1148.7°179.3°
H9C06C07H1048.9°60.9°
H9C06C07H11167.1°59.1°
H14C12N11H23178.1°63.9°
H15C12N11H2359.4°176.1°
H21N02O01H25179.6°0.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon