LDI
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O04 | C03 | doub | 1.21Å | 1.19Å | |
C06 | C07 | sing | 1.53Å | 1.54Å | |
C06 | C05 | sing | 1.53Å | 1.45Å | |
C07 | N08 | sing | 1.47Å | 1.45Å | |
C03 | C05 | sing | 1.51Å | 1.55Å | |
C03 | N02 | sing | 1.35Å | 1.44Å | |
O01 | N02 | sing | 1.42Å | 1.41Å | |
C17 | C18 | doub | 1.38Å | 1.39Å | Aromatic |
C17 | C16 | sing | 1.38Å | 1.39Å | Aromatic |
C05 | C20 | sing | 1.53Å | 1.45Å | |
C18 | C13 | sing | 1.38Å | 1.39Å | Aromatic |
N08 | C09 | sing | 1.47Å | 1.23Å | |
N08 | C19 | sing | 1.47Å | 1.44Å | |
C16 | C15 | doub | 1.38Å | 1.39Å | Aromatic |
C09 | C10 | sing | 1.53Å | 1.54Å | |
N11 | C10 | sing | 1.47Å | 1.46Å | |
N11 | C12 | sing | 1.47Å | 1.47Å | |
C20 | C19 | sing | 1.53Å | 1.55Å | |
C13 | C12 | sing | 1.51Å | 1.55Å | |
C13 | C14 | doub | 1.38Å | 1.40Å | Aromatic |
C15 | C14 | sing | 1.38Å | 1.39Å | Aromatic |
C10 | H1 | sing | 1.09Å | 1.10Å | |
C10 | H2 | sing | 1.09Å | 1.10Å | |
C15 | H3 | sing | 1.08Å | 1.08Å | |
C17 | H4 | sing | 1.08Å | 1.08Å | |
C20 | H5 | sing | 1.09Å | 1.10Å | |
C20 | H6 | sing | 1.09Å | 1.10Å | |
C05 | H7 | sing | 1.09Å | 1.10Å | |
C06 | H8 | sing | 1.09Å | 1.10Å | |
C06 | H9 | sing | 1.09Å | 1.10Å | |
C07 | H10 | sing | 1.09Å | 1.10Å | |
C07 | H11 | sing | 1.09Å | 1.10Å | |
C09 | H12 | sing | 1.09Å | 1.10Å | |
C09 | H13 | sing | 1.09Å | 1.10Å | |
C12 | H14 | sing | 1.09Å | 1.10Å | |
C12 | H15 | sing | 1.09Å | 1.10Å | |
C14 | H16 | sing | 1.08Å | 1.08Å | |
C16 | H17 | sing | 1.08Å | 1.08Å | |
C18 | H18 | sing | 1.08Å | 1.08Å | |
C19 | H19 | sing | 1.09Å | 1.10Å | |
C19 | H20 | sing | 1.09Å | 1.10Å | |
N02 | H21 | sing | 0.97Å | 1.00Å | |
N11 | H23 | sing | 1.01Å | 1.00Å | |
O01 | H25 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O04 | C03 | C05 | 123.0° | 120.0° |
O04 | C03 | N02 | 115.2° | 120.1° |
C07 | C06 | C05 | 115.1° | 109.3° |
C06 | C07 | N08 | 115.9° | 109.5° |
C07 | C06 | H8 | 108.1° | 109.5° |
C07 | C06 | H9 | 108.1° | 109.5° |
C06 | C07 | H10 | 107.8° | 109.5° |
C06 | C07 | H11 | 107.8° | 109.5° |
C06 | C05 | C03 | 110.4° | 109.6° |
C06 | C05 | C20 | 113.2° | 109.1° |
C06 | C05 | H7 | 107.6° | 109.6° |
C05 | C06 | H8 | 108.1° | 109.5° |
C05 | C06 | H9 | 108.0° | 109.4° |
C07 | N08 | C09 | 112.3° | 111.0° |
C07 | N08 | C19 | 114.7° | 111.2° |
N08 | C07 | H10 | 107.8° | 109.4° |
N08 | C07 | H11 | 107.9° | 109.4° |
C05 | C03 | N02 | 121.7° | 119.9° |
C03 | C05 | C20 | 111.3° | 109.5° |
C03 | C05 | H7 | 106.4° | 109.5° |
C03 | N02 | O01 | 120.0° | 120.0° |
C03 | N02 | H21 | 120.0° | 120.1° |
O01 | N02 | H21 | 120.0° | 119.9° |
N02 | O01 | H25 | 109.5° | 114.0° |
C18 | C17 | C16 | 120.1° | 120.0° |
C17 | C18 | C13 | 120.7° | 120.0° |
C18 | C17 | H4 | 119.9° | 120.0° |
C17 | C18 | H18 | 119.6° | 120.0° |
C17 | C16 | C15 | 119.6° | 120.0° |
C16 | C17 | H4 | 119.9° | 120.0° |
C17 | C16 | H17 | 120.2° | 120.0° |
C05 | C20 | C19 | 118.4° | 109.3° |
C05 | C20 | H5 | 107.2° | 109.5° |
C05 | C20 | H6 | 107.2° | 109.5° |
C20 | C05 | H7 | 107.6° | 109.5° |
C18 | C13 | C12 | 120.4° | 120.0° |
C18 | C13 | C14 | 118.6° | 120.1° |
C13 | C18 | H18 | 119.7° | 120.0° |
C09 | N08 | C19 | 113.1° | 111.0° |
N08 | C09 | C10 | 111.9° | 109.5° |
N08 | C09 | H12 | 108.9° | 109.4° |
N08 | C09 | H13 | 108.9° | 109.5° |
N08 | C19 | C20 | 117.8° | 109.5° |
N08 | C19 | H19 | 107.3° | 109.4° |
N08 | C19 | H20 | 107.3° | 109.4° |
C16 | C15 | C14 | 120.1° | 120.1° |
C16 | C15 | H3 | 120.0° | 120.0° |
C15 | C16 | H17 | 120.2° | 120.1° |
C09 | C10 | N11 | 114.2° | 109.5° |
C09 | C10 | H1 | 108.3° | 109.5° |
C09 | C10 | H2 | 108.3° | 109.4° |
C10 | C09 | H12 | 108.9° | 109.5° |
C10 | C09 | H13 | 108.9° | 109.5° |
C10 | N11 | C12 | 111.4° | 111.0° |
N11 | C10 | H1 | 108.3° | 109.5° |
N11 | C10 | H2 | 108.3° | 109.5° |
C10 | N11 | H23 | 109.0° | 110.9° |
N11 | C12 | C13 | 113.9° | 109.5° |
N11 | C12 | H14 | 108.3° | 109.5° |
N11 | C12 | H15 | 108.3° | 109.5° |
C12 | N11 | H23 | 109.0° | 111.0° |
C19 | C20 | H5 | 107.2° | 109.5° |
C19 | C20 | H6 | 107.2° | 109.5° |
C20 | C19 | H19 | 107.4° | 109.5° |
C20 | C19 | H20 | 107.4° | 109.5° |
C12 | C13 | C14 | 121.0° | 120.0° |
C13 | C12 | H14 | 108.4° | 109.5° |
C13 | C12 | H15 | 108.3° | 109.4° |
C13 | C14 | C15 | 120.8° | 119.9° |
C13 | C14 | H16 | 119.6° | 120.1° |
C14 | C15 | H3 | 119.9° | 120.0° |
C15 | C14 | H16 | 119.6° | 120.0° |
H1 | C10 | H2 | 109.5° | 109.4° |
H5 | C20 | H6 | 109.5° | 109.5° |
H8 | C06 | H9 | 109.5° | 109.5° |
H10 | C07 | H11 | 109.5° | 109.5° |
H12 | C09 | H13 | 109.4° | 109.5° |
H14 | C12 | H15 | 109.5° | 109.5° |
H19 | C19 | H20 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O04 | C03 | C05 | C06 | 30.0° | 119.7° |
O04 | C03 | C05 | N02 | 179.5° | 180.0° |
O04 | C03 | N02 | O01 | 0.9° | 0.0° |
O04 | C03 | C05 | C20 | 156.6° | 0.0° |
O04 | C03 | C05 | H7 | 86.5° | 120.1° |
O04 | C03 | N02 | H21 | 179.1° | 180.0° |
C07 | C06 | C05 | H8 | 120.8° | 120.0° |
C07 | C06 | C05 | H9 | 120.8° | 119.9° |
C06 | C07 | N08 | H10 | 120.9° | 120.0° |
C06 | C07 | N08 | H11 | 120.9° | 120.0° |
C07 | C06 | C05 | C03 | 169.9° | 177.6° |
C07 | C06 | C05 | C20 | 44.3° | 57.7° |
C06 | C07 | N08 | C09 | 171.9° | 174.1° |
C06 | C07 | N08 | C19 | 40.9° | 61.8° |
C07 | C06 | C05 | H7 | 74.4° | 62.2° |
C07 | C06 | H8 | H9 | 117.5° | 120.1° |
C06 | C07 | H10 | H11 | 117.0° | 120.1° |
C05 | C06 | C07 | N08 | 48.8° | 59.2° |
C06 | C05 | C03 | C20 | 126.6° | 119.7° |
C06 | C05 | C03 | H7 | 116.5° | 120.2° |
C06 | C05 | C03 | N02 | 149.5° | 60.3° |
C06 | C05 | C20 | H7 | 118.8° | 119.9° |
C06 | C05 | C20 | C19 | 35.4° | 57.7° |
C06 | C05 | C20 | H5 | 156.6° | 177.6° |
C06 | C05 | C20 | H6 | 85.9° | 62.3° |
C05 | C06 | H8 | H9 | 117.4° | 120.0° |
C05 | C06 | C07 | H10 | 169.7° | 179.2° |
C05 | C06 | C07 | H11 | 72.1° | 60.8° |
C07 | N08 | C09 | C19 | 131.8° | 124.2° |
C07 | N08 | C09 | C10 | 148.0° | 170.0° |
C07 | N08 | C19 | C20 | 31.3° | 61.8° |
N08 | C07 | C06 | H8 | 169.6° | 60.8° |
N08 | C07 | C06 | H9 | 72.0° | 179.1° |
N08 | C07 | H10 | H11 | 117.1° | 119.9° |
C07 | N08 | C09 | H12 | 27.7° | 70.0° |
C07 | N08 | C09 | H13 | 91.6° | 50.0° |
C07 | N08 | C19 | H19 | 152.5° | 58.3° |
C07 | N08 | C19 | H20 | 89.9° | 178.3° |
C05 | C03 | N02 | O01 | 179.6° | 180.0° |
C03 | C05 | C20 | H7 | 116.2° | 120.1° |
C03 | C05 | C20 | C19 | 160.4° | 177.6° |
C03 | C05 | C20 | H5 | 78.3° | 62.5° |
C03 | C05 | C20 | H6 | 39.2° | 57.6° |
C03 | C05 | C06 | H8 | 69.3° | 57.6° |
C03 | C05 | C06 | H9 | 49.0° | 62.5° |
C05 | C03 | N02 | H21 | 0.4° | 0.0° |
C03 | N02 | O01 | H21 | 180.0° | 180.0° |
N02 | C03 | C05 | C20 | 22.9° | 180.0° |
N02 | C03 | C05 | H7 | 94.0° | 59.9° |
C03 | N02 | O01 | H25 | 0.4° | 180.0° |
C18 | C17 | C16 | H4 | 180.0° | 180.0° |
C17 | C18 | C13 | H18 | 180.0° | 180.0° |
C18 | C17 | C16 | C15 | 0.1° | 0.3° |
C17 | C18 | C13 | C12 | 179.6° | 180.0° |
C17 | C18 | C13 | C14 | 0.6° | 0.3° |
C18 | C17 | C16 | H17 | 179.9° | 180.0° |
C16 | C17 | C18 | C13 | 0.4° | 0.0° |
C17 | C16 | C15 | H17 | 180.0° | 179.7° |
C17 | C16 | C15 | C14 | 0.1° | 0.3° |
C17 | C16 | C15 | H3 | 179.9° | 179.7° |
C16 | C17 | C18 | H18 | 179.6° | 180.0° |
C05 | C20 | C19 | N08 | 29.4° | 59.2° |
C05 | C20 | C19 | H5 | 121.3° | 119.9° |
C05 | C20 | C19 | H6 | 121.3° | 120.0° |
C05 | C20 | H5 | H6 | 115.9° | 120.1° |
C20 | C05 | C06 | H8 | 165.2° | 62.3° |
C20 | C05 | C06 | H9 | 76.5° | 177.6° |
C05 | C20 | C19 | H19 | 150.5° | 60.8° |
C05 | C20 | C19 | H20 | 91.8° | 179.2° |
C18 | C13 | C12 | N11 | 95.4° | 90.3° |
C18 | C13 | C12 | C14 | 179.8° | 179.7° |
C18 | C13 | C14 | C15 | 0.6° | 0.3° |
C13 | C18 | C17 | H4 | 179.6° | 180.0° |
C18 | C13 | C12 | H14 | 144.0° | 29.7° |
C18 | C13 | C12 | H15 | 25.2° | 149.7° |
C18 | C13 | C14 | H16 | 179.4° | 179.7° |
N08 | C09 | C10 | H12 | 120.4° | 119.9° |
N08 | C09 | C10 | H13 | 120.4° | 120.0° |
N08 | C09 | C10 | N11 | 144.1° | 179.9° |
C09 | N08 | C19 | C20 | 161.9° | 174.1° |
N08 | C09 | C10 | H1 | 95.2° | 59.9° |
N08 | C09 | C10 | H2 | 23.4° | 60.0° |
C09 | N08 | C07 | H10 | 67.2° | 54.1° |
C09 | N08 | C07 | H11 | 51.0° | 65.8° |
N08 | C09 | H12 | H13 | 118.9° | 120.0° |
C09 | N08 | C19 | H19 | 76.9° | 65.8° |
C09 | N08 | C19 | H20 | 40.8° | 54.1° |
C19 | N08 | C09 | C10 | 80.1° | 65.8° |
N08 | C19 | C20 | H19 | 121.2° | 120.0° |
N08 | C19 | C20 | H20 | 121.2° | 120.0° |
N08 | C19 | C20 | H5 | 150.7° | 179.1° |
N08 | C19 | C20 | H6 | 91.9° | 60.8° |
C19 | N08 | C07 | H10 | 161.8° | 178.3° |
C19 | N08 | C07 | H11 | 80.1° | 58.3° |
C19 | N08 | C09 | H12 | 159.5° | 54.2° |
C19 | N08 | C09 | H13 | 40.2° | 174.2° |
N08 | C19 | H19 | H20 | 116.2° | 119.9° |
C16 | C15 | C14 | C13 | 0.4° | 0.0° |
C16 | C15 | C14 | H3 | 180.0° | 179.9° |
C15 | C16 | C17 | H4 | 179.9° | 179.7° |
C16 | C15 | C14 | H16 | 179.6° | 180.0° |
C09 | C10 | N11 | H1 | 120.7° | 120.0° |
C09 | C10 | N11 | H2 | 120.7° | 120.0° |
C09 | C10 | N11 | C12 | 171.6° | 180.0° |
C09 | C10 | H1 | H2 | 117.8° | 119.9° |
C10 | C09 | H12 | H13 | 118.9° | 120.0° |
C09 | C10 | N11 | H23 | 68.1° | 56.1° |
C10 | N11 | C12 | H23 | 120.3° | 123.9° |
C10 | N11 | C12 | C13 | 178.5° | 180.0° |
N11 | C10 | H1 | H2 | 117.8° | 120.0° |
N11 | C10 | C09 | H12 | 23.7° | 60.0° |
N11 | C10 | C09 | H13 | 95.5° | 60.0° |
C10 | N11 | C12 | H14 | 57.8° | 60.0° |
C10 | N11 | C12 | H15 | 60.9° | 60.1° |
N11 | C12 | C13 | H14 | 120.6° | 120.0° |
N11 | C12 | C13 | H15 | 120.6° | 120.0° |
N11 | C12 | C13 | C14 | 84.8° | 90.0° |
C12 | N11 | C10 | H1 | 50.9° | 60.0° |
C12 | N11 | C10 | H2 | 67.7° | 59.9° |
N11 | C12 | H14 | H15 | 118.0° | 120.0° |
C19 | C20 | H5 | H6 | 115.9° | 120.1° |
C19 | C20 | C05 | H7 | 83.4° | 62.3° |
C20 | C19 | H19 | H20 | 116.3° | 120.0° |
C12 | C13 | C14 | C15 | 179.6° | 180.0° |
C13 | C12 | H14 | H15 | 118.0° | 120.0° |
C12 | C13 | C14 | H16 | 0.4° | 0.0° |
C12 | C13 | C18 | H18 | 0.4° | 0.0° |
C13 | C12 | N11 | H23 | 61.2° | 56.1° |
C13 | C14 | C15 | H16 | 180.0° | 180.0° |
C13 | C14 | C15 | H3 | 179.6° | 180.0° |
C14 | C13 | C12 | H14 | 35.8° | 150.0° |
C14 | C13 | C12 | H15 | 154.5° | 30.0° |
C14 | C13 | C18 | H18 | 179.4° | 179.7° |
C14 | C15 | C16 | H17 | 179.9° | 180.0° |
H1 | C10 | C09 | H12 | 144.4° | 60.0° |
H1 | C10 | C09 | H13 | 25.2° | 180.0° |
H1 | C10 | N11 | H23 | 171.2° | 176.1° |
H2 | C10 | C09 | H12 | 97.0° | 179.9° |
H2 | C10 | C09 | H13 | 143.8° | 60.0° |
H2 | C10 | N11 | H23 | 52.6° | 63.9° |
H3 | C15 | C14 | H16 | 0.4° | 0.0° |
H3 | C15 | C16 | H17 | 0.1° | 0.1° |
H4 | C17 | C16 | H17 | 0.1° | 0.0° |
H4 | C17 | C18 | H18 | 0.4° | 0.0° |
H5 | C20 | C05 | H7 | 37.9° | 57.7° |
H5 | C20 | C19 | H19 | 88.2° | 59.1° |
H5 | C20 | C19 | H20 | 29.5° | 60.9° |
H6 | C20 | C05 | H7 | 155.3° | 177.8° |
H6 | C20 | C19 | H19 | 29.3° | 179.2° |
H6 | C20 | C19 | H20 | 146.9° | 59.2° |
H7 | C05 | C06 | H8 | 46.4° | 177.8° |
H7 | C05 | C06 | H9 | 164.8° | 57.7° |
H8 | C06 | C07 | H10 | 69.4° | 59.2° |
H8 | C06 | C07 | H11 | 48.7° | 179.3° |
H9 | C06 | C07 | H10 | 48.9° | 60.9° |
H9 | C06 | C07 | H11 | 167.1° | 59.1° |
H14 | C12 | N11 | H23 | 178.1° | 63.9° |
H15 | C12 | N11 | H23 | 59.4° | 176.1° |
H21 | N02 | O01 | H25 | 179.6° | 0.0° |