Obsolete: LCH

LCH was replaced with LCC on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O5'	C5'	sing	1.42Å	1.42Å
O5'	P	sing	1.62Å	1.61Å
C5'	C4'	sing	1.51Å	1.53Å
C5'	H5'1	sing	1.10Å	1.09Å
C5'	H5'2	sing	1.10Å	1.09Å
C4'	O4'	sing	1.45Å	1.43Å
C4'	C3'	sing	1.51Å	1.52Å
C4'	C6'	sing	1.53Å	1.53Å
O4'	C1'	sing	1.45Å	1.43Å
C1'	N1	sing	1.43Å	1.50Å
C1'	C2'	sing	1.53Å	1.53Å
C1'	H1'	sing	1.09Å	1.10Å
N1	C6	sing	1.39Å	1.39Å
N1	C2	sing	1.42Å	1.40Å
C6	C5	doub	1.34Å	1.36Å
C6	H6	sing	1.08Å	1.08Å
C5	C5M	sing	1.49Å	1.52Å
C5	C4	sing	1.50Å	1.44Å
C5M	H5M1	sing	1.09Å	1.09Å
C5M	H5M2	sing	1.09Å	1.09Å
C5M	H5M3	sing	1.09Å	1.09Å
C4	N4	sing	1.38Å	1.34Å
C4	N3	doub	1.31Å	1.38Å
N4	H41	sing	0.99Å	1.01Å
N4	H42	sing	0.99Å	1.01Å
N3	C2	sing	1.38Å	1.39Å
C2	O2	doub	1.23Å	1.23Å
C3'	C2'	sing	1.52Å	1.54Å
C3'	O3'	sing	1.41Å	1.44Å
C3'	H3'	sing	1.10Å	1.09Å
C2'	O2'	sing	1.45Å	1.41Å
C2'	H2'1	sing	1.09Å	1.08Å
O2'	C6'	sing	1.45Å	1.40Å
O3'	HA	sing	0.97Å	0.95Å
C6'	H6'1	sing	1.09Å	1.09Å
C6'	H6'2	sing	1.09Å	1.07Å
P	O1P	doub	1.50Å	1.48Å
P	O2P	sing	1.62Å	1.48Å
P	OXT	sing	1.62Å	1.62Å
OXT	HXT	sing	0.98Å	11.25Å
HO1	O2P	sing	0.98Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C5'	O5'	P	120.6°	118.3°
O5'	C5'	C4'	111.0°	109.2°
O5'	C5'	H5'1	109.5°	108.6°
O5'	C5'	H5'2	109.4°	108.5°
O5'	P	O1P	108.7°	115.0°
O5'	P	O2P	108.3°	102.7°
O5'	P	OXT	101.0°	103.8°
C4'	C5'	H5'1	108.2°	110.8°
C4'	C5'	H5'2	110.0°	110.8°
C5'	C4'	O4'	112.2°	111.3°
C5'	C4'	C3'	118.4°	117.7°
C5'	C4'	C6'	113.6°	115.0°
H5'1	C5'	H5'2	108.8°	108.8°
O4'	C4'	C3'	102.6°	102.6°
O4'	C4'	C6'	106.8°	106.7°
C4'	O4'	C1'	105.7°	104.8°
C3'	C4'	C6'	101.9°	102.2°
C4'	C3'	C2'	87.9°	91.0°
C4'	C3'	O3'	123.9°	114.8°
C4'	C3'	H3'	107.6°	114.4°
C4'	C6'	O2'	103.5°	102.5°
C4'	C6'	H6'1	112.8°	113.6°
C4'	C6'	H6'2	109.7°	113.3°
O4'	C1'	N1	114.5°	109.6°
O4'	C1'	C2'	101.4°	102.7°
O4'	C1'	H1'	111.0°	108.5°
N1	C1'	C2'	112.6°	114.0°
N1	C1'	H1'	111.5°	108.7°
C1'	N1	C6	122.5°	118.8°
C1'	N1	C2	116.5°	122.1°
C2'	C1'	H1'	105.1°	113.1°
C1'	C2'	C3'	101.3°	101.6°
C1'	C2'	O2'	102.3°	105.5°
C1'	C2'	H2'1	112.6°	117.0°
C6	N1	C2	121.0°	119.1°
N1	C6	C5	122.3°	123.5°
N1	C6	H6	120.7°	115.1°
N1	C2	N3	116.8°	118.9°
N1	C2	O2	123.1°	120.9°
C5	C6	H6	117.0°	121.4°
C6	C5	C5M	120.9°	123.9°
C6	C5	C4	117.4°	115.5°
C5M	C5	C4	121.7°	120.7°
C5	C5M	H5M1	110.0°	109.9°
C5	C5M	H5M2	109.4°	109.9°
C5	C5M	H5M3	110.6°	109.8°
C5	C4	N4	123.4°	119.8°
C5	C4	N3	119.4°	121.5°
H5M1	C5M	H5M2	109.3°	109.2°
H5M1	C5M	H5M3	108.6°	109.2°
H5M2	C5M	H5M3	109.0°	108.8°
N4	C4	N3	117.2°	118.6°
C4	N4	H41	120.5°	117.9°
C4	N4	H42	120.4°	117.9°
C4	N3	C2	123.0°	121.5°
H41	N4	H42	119.1°	124.2°
N3	C2	O2	120.2°	120.2°
C2'	C3'	O3'	123.7°	112.4°
C2'	C3'	H3'	109.5°	113.0°
C3'	C2'	O2'	109.2°	103.6°
C3'	C2'	H2'1	118.6°	117.3°
O3'	C3'	H3'	103.2°	110.1°
C3'	O3'	HA	123.9°	107.4°
O2'	C2'	H2'1	111.3°	110.4°
C2'	O2'	C6'	104.3°	105.1°
O2'	C6'	H6'1	112.5°	108.2°
O2'	C6'	H6'2	105.1°	108.4°
H6'1	C6'	H6'2	112.7°	110.2°
O1P	P	O2P	120.0°	115.0°
O1P	P	OXT	108.1°	115.3°
O2P	P	OXT	109.0°	103.3°
P	O2P	HO1	109.5°	118.9°
P	OXT	HXT	57.4°	118.9°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5'	C5'	C4'	H5'1	120.1°	119.5°
O5'	C5'	C4'	H5'2	121.2°	119.5°
O5'	C5'	H5'1	H5'2	119.5°	118.0°
O5'	C5'	C4'	O4'	58.9°	59.0°
O5'	C5'	C4'	C3'	60.4°	59.0°
O5'	C5'	C4'	C6'	179.9°	179.5°
C5'	O5'	P	O1P	36.1°	180.0°
C5'	O5'	P	O2P	168.0°	54.3°
C5'	O5'	P	OXT	77.5°	53.1°
P	O5'	C5'	C4'	157.5°	180.0°
P	O5'	C5'	H5'1	38.2°	59.1°
P	O5'	C5'	H5'2	80.9°	59.1°
O5'	P	O1P	O2P	125.4°	119.1°
O5'	P	O1P	OXT	108.8°	120.8°
O5'	P	O2P	OXT	109.0°	107.7°
O5'	P	OXT	HXT	41.6°	175.5°
O5'	P	O2P	HO1	71.0°	173.8°
C4'	C5'	H5'1	H5'2	119.4°	122.1°
C5'	C4'	O4'	C3'	128.2°	126.8°
C5'	C4'	O4'	C6'	125.1°	126.2°
C5'	C4'	C3'	C6'	125.5°	127.0°
C5'	C4'	O4'	C1'	168.1°	165.6°
C5'	C4'	C3'	C2'	177.4°	179.5°
C5'	C4'	C3'	O3'	47.2°	65.1°
C5'	C4'	C3'	H3'	72.9°	63.6°
C5'	C4'	C6'	O2'	170.6°	163.8°
C5'	C4'	C6'	H6'1	67.6°	47.3°
C5'	C4'	C6'	H6'2	58.8°	79.5°
H5'1	C5'	C4'	O4'	61.2°	178.6°
H5'1	C5'	C4'	C3'	179.5°	60.5°
H5'1	C5'	C4'	C6'	60.0°	60.0°
H5'2	C5'	C4'	O4'	179.9°	60.5°
H5'2	C5'	C4'	C3'	60.8°	178.5°
H5'2	C5'	C4'	C6'	58.7°	61.0°
O4'	C4'	C3'	C6'	110.4°	110.4°
C4'	O4'	C1'	N1	122.6°	124.1°
C4'	O4'	C1'	C2'	1.1°	2.6°
C4'	O4'	C1'	H1'	110.1°	117.3°
O4'	C4'	C3'	C2'	58.5°	56.9°
O4'	C4'	C3'	O3'	171.3°	172.3°
O4'	C4'	C3'	H3'	51.2°	59.0°
O4'	C4'	C6'	O2'	65.2°	72.2°
O4'	C4'	C6'	H6'1	56.6°	171.2°
O4'	C4'	C6'	H6'2	177.0°	44.4°
C3'	C4'	O4'	C1'	40.0°	38.8°
C4'	C3'	C2'	C1'	56.6°	54.0°
C4'	C3'	C2'	O3'	130.3°	117.5°
C4'	C3'	C2'	H3'	107.9°	117.2°
C4'	C3'	O3'	H3'	122.1°	130.8°
C4'	C3'	C2'	O2'	50.8°	55.3°
C4'	C3'	C2'	H2'1	179.7°	177.1°
C3'	C4'	C6'	O2'	42.0°	35.1°
C4'	C3'	O3'	HA	180.0°	128.5°
C3'	C4'	C6'	H6'1	163.8°	81.4°
C3'	C4'	C6'	H6'2	69.8°	151.8°
C6'	C4'	O4'	C1'	66.8°	68.2°
C6'	C4'	C3'	C2'	51.9°	53.5°
C6'	C4'	C3'	O3'	78.2°	61.9°
C6'	C4'	C3'	H3'	161.7°	169.5°
C4'	C6'	O2'	C2'	8.1°	0.8°
C4'	C6'	O2'	H6'1	122.0°	120.3°
C4'	C6'	O2'	H6'2	115.1°	120.1°
C4'	C6'	H6'1	H6'2	124.9°	128.4°
O4'	C1'	N1	C2'	115.1°	114.4°
O4'	C1'	N1	H1'	127.0°	118.4°
O4'	C1'	C2'	H1'	115.6°	116.7°
O4'	C1'	N1	C6	16.6°	1.6°
O4'	C1'	N1	C2	165.0°	178.5°
O4'	C1'	C2'	C3'	37.5°	34.2°
O4'	C1'	C2'	O2'	75.3°	73.7°
O4'	C1'	C2'	H2'1	165.1°	163.2°
N1	C1'	C2'	H1'	121.6°	124.9°
C1'	N1	C6	C2	178.3°	179.9°
C1'	N1	C6	C5	175.7°	179.9°
C1'	N1	C6	H6	4.6°	0.0°
C1'	N1	C2	N3	177.5°	180.0°
C1'	N1	C2	O2	2.3°	0.1°
N1	C1'	C2'	C3'	85.3°	84.3°
N1	C1'	C2'	O2'	161.9°	167.9°
N1	C1'	C2'	H2'1	42.3°	44.7°
C2'	C1'	N1	C6	98.5°	112.8°
C2'	C1'	N1	C2	79.9°	67.1°
C1'	C2'	C3'	O2'	107.4°	109.3°
C1'	C2'	C3'	H2'1	123.7°	128.9°
C1'	C2'	C3'	O3'	173.1°	171.5°
C1'	C2'	C3'	H3'	51.3°	63.2°
C1'	C2'	O2'	H2'1	120.5°	127.3°
C1'	C2'	O2'	C6'	78.0°	69.7°
H1'	C1'	N1	C6	143.7°	120.0°
H1'	C1'	N1	C2	38.0°	60.1°
H1'	C1'	C2'	C3'	153.1°	150.8°
H1'	C1'	C2'	O2'	40.3°	43.0°
H1'	C1'	C2'	H2'1	79.2°	80.1°
N1	C6	C5	H6	179.7°	179.9°
N1	C6	C5	C5M	178.7°	180.0°
N1	C6	C5	C4	1.6°	0.0°
C6	N1	C2	N3	0.9°	0.1°
C6	N1	C2	O2	179.3°	180.0°
C2	N1	C6	C5	2.6°	0.0°
C2	N1	C6	H6	177.1°	179.9°
N1	C2	N3	C4	1.7°	0.1°
N1	C2	N3	O2	179.8°	179.9°
C6	C5	C5M	C4	179.7°	180.0°
C6	C5	C5M	H5M1	133.4°	115.0°
C6	C5	C5M	H5M2	106.6°	124.8°
C6	C5	C5M	H5M3	13.4°	5.2°
C6	C5	C4	N4	180.0°	179.9°
C6	C5	C4	N3	1.0°	0.0°
H6	C6	C5	C5M	1.5°	0.0°
H6	C6	C5	C4	178.1°	179.9°
C5	C5M	H5M1	H5M2	120.1°	120.6°
C5	C5M	H5M1	H5M3	121.1°	120.5°
C5	C5M	H5M2	H5M3	121.0°	120.3°
C5M	C5	C4	N4	0.3°	0.1°
C5M	C5	C4	N3	178.6°	180.0°
C4	C5	C5M	H5M1	46.3°	65.0°
C4	C5	C5M	H5M2	73.7°	55.2°
C4	C5	C5M	H5M3	166.2°	174.8°
C5	C4	N4	N3	179.0°	179.9°
C5	C4	N4	H41	178.7°	29.7°
C5	C4	N4	H42	2.0°	150.5°
C5	C4	N3	C2	2.7°	0.0°
H5M1	C5M	H5M2	H5M3	118.6°	119.1°
C4	N4	H41	H42	179.4°	179.9°
N4	C4	N3	C2	178.2°	180.0°
N3	C4	N4	H41	0.3°	150.4°
N3	C4	N4	H42	179.0°	29.5°
C4	N3	C2	O2	178.1°	180.0°
C2'	C3'	O3'	H3'	124.6°	126.9°
C3'	C2'	O2'	H2'1	132.8°	126.4°
C3'	C2'	O2'	C6'	28.8°	36.7°
C2'	C3'	O3'	HA	66.7°	26.3°
O3'	C3'	C2'	O2'	79.5°	62.2°
O3'	C3'	C2'	H2'1	49.4°	59.7°
H3'	C3'	C2'	O2'	158.8°	172.5°
H3'	C3'	C2'	H2'1	72.4°	65.7°
H3'	C3'	O3'	HA	57.9°	100.7°
C2'	O2'	C6'	H6'1	130.1°	121.2°
C2'	O2'	C6'	H6'2	107.0°	119.2°
H2'1	C2'	O2'	C6'	161.5°	163.1°
O2'	C6'	H6'1	H6'2	118.5°	118.4°
O1P	P	O2P	OXT	125.4°	126.5°
O1P	P	OXT	HXT	155.7°	48.8°
O1P	P	O2P	HO1	54.6°	48.0°
O2P	P	OXT	HXT	72.3°	77.5°
OXT	P	O2P	HO1	180.0°	78.5°

Definition date:	2004-09-16
Last modified:	2009-01-07
Release status:	OBS
Processing site:	EBI
Replaced by:	LCC
Derived from:	1W86