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SummaryGeometryRelated PDB entries

L8J

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O14P11doub1.48Å1.51Å
O17C16doub1.22Å1.18Å
O12P11sing1.61Å1.51Å
P11O13sing1.61Å1.51Å
P11C10sing1.82Å1.85Å
C16C15sing1.41Å1.38Å
C16N18sing1.34Å1.31Å
C15C09doub1.36Å1.39Å
N18C07sing1.38Å1.34Å
C09C10sing1.51Å1.53Å
C09C08sing1.46Å1.43Å
C07C08doub1.41Å1.39ÅAromatic
C07C06sing1.39Å1.41ÅAromatic
C08C04sing1.40Å1.44ÅAromatic
C06C02doub1.38Å1.38ÅAromatic
C04BR05sing1.89Å1.93Å
C04C03doub1.37Å1.36ÅAromatic
C02C03sing1.39Å1.37ÅAromatic
C02BR01sing1.89Å1.92Å
C03H1sing1.08Å1.08Å
C06H2sing1.08Å1.08Å
C10H3sing1.09Å1.10Å
C10H4sing1.09Å1.10Å
C15H5sing1.08Å1.08Å
N18H6sing0.97Å1.00Å
O12H7sing0.97Å0.95Å
O13H8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O14P11O12109.6°109.5°
O14P11O13110.1°109.4°
O14P11C10108.8°109.4°
O17C16C15119.7°119.2°
O17C16N18120.5°119.2°
O12P11O13109.7°109.5°
O12P11C10106.8°109.5°
P11O12H7109.5°114.0°
O13P11C10111.7°109.5°
P11O13H8109.5°114.0°
P11C10C09116.0°109.5°
P11C10H3107.8°109.5°
P11C10H4107.8°109.4°
C15C16N18119.8°121.6°
C16C15C09122.4°120.2°
C16C15H5118.8°119.9°
C16N18C07120.7°121.0°
C16N18H6119.7°119.5°
C15C09C10114.5°120.7°
C15C09C08116.8°118.6°
C09C15H5118.8°119.9°
N18C07C08123.5°119.6°
N18C07C06115.0°121.0°
C07N18H6119.7°119.5°
C10C09C08128.6°120.8°
C09C10H3107.8°109.5°
C09C10H4107.8°109.4°
C09C08C07116.8°119.0°
C09C08C04129.7°121.1°
C08C07C06121.6°119.4°
C07C08C04113.5°119.9°
C07C06C02120.5°119.8°
C07C06H2119.7°120.1°
C08C04BR05115.5°120.2°
C08C04C03125.9°119.7°
C06C02C03120.9°120.7°
C06C02BR01122.6°119.6°
C02C06H2119.7°120.2°
BR05C04C03118.6°120.1°
C04C03C02117.5°120.6°
C04C03H1121.3°119.8°
C03C02BR01116.5°119.7°
C02C03H1121.2°119.7°
H3C10H4109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O14P11O12O13121.0°120.0°
O14P11O12C10117.8°120.0°
O14P11O13C10121.0°119.9°
O14P11C10C0941.9°55.0°
O14P11C10H3162.8°65.1°
O14P11C10H479.0°175.0°
O14P11O12H70.0°60.0°
O14P11O13H80.0°180.0°
O17C16C15N18179.9°179.2°
O17C16C15C09179.8°180.0°
O17C16N18C07180.0°179.2°
O17C16C15H50.1°0.0°
O17C16N18H60.0°0.8°
O12P11O13C10118.3°120.1°
O12P11C10C09160.1°175.0°
O12P11C10H378.9°54.9°
O12P11C10H439.2°65.0°
O12P11O13H8120.7°60.0°
O13P11C10C0979.9°64.9°
O13P11C10H341.0°175.0°
O13P11C10H4159.2°55.0°
O13P11O12H7121.0°60.0°
P11C10C09C1583.3°0.0°
P11C10C09H3121.0°120.1°
P11C10C09H4120.9°120.0°
P11C10C09C0898.2°180.0°
P11C10H3H4117.1°119.9°
C10P11O12H7117.8°180.0°
C10P11O13H8121.0°60.0°
C16C15C09H5180.0°180.0°
C15C16N18C070.1°1.5°
C16C15C09C10179.1°180.0°
C16C15C09C080.4°0.0°
C15C16N18H6179.9°180.0°
N18C16C15C090.3°0.7°
C16N18C07H6180.0°178.5°
C16N18C07C080.2°1.5°
C16N18C07C06179.9°179.2°
N18C16C15H5179.8°179.2°
C15C09C10C08178.5°180.0°
C15C09C08C070.5°0.0°
C15C09C08C04179.8°179.2°
C15C09C10H3155.7°120.1°
C15C09C10H437.7°120.0°
N18C07C08C090.3°0.7°
N18C07C08C06180.0°179.3°
N18C07C08C04179.9°180.0°
N18C07C06C02179.9°179.8°
N18C07C06H20.1°0.3°
C10C09C08C07178.9°180.0°
C10C09C08C041.3°0.7°
C09C10H3H4117.0°120.0°
C10C09C15H50.9°0.0°
C09C08C07C04179.8°179.3°
C09C08C07C06179.7°180.0°
C09C08C04BR050.3°0.3°
C09C08C04C03179.8°179.7°
C08C09C10H322.8°60.0°
C08C09C10H4140.8°60.0°
C08C09C15H5179.6°180.0°
C08C07C06C020.1°0.5°
C07C08C04BR05180.0°179.6°
C07C08C04C030.1°0.4°
C08C07C06H2179.9°179.6°
C08C07N18H6179.8°180.0°
C06C07C08C040.1°0.7°
C07C06C02H2180.0°179.9°
C07C06C02C030.0°0.0°
C07C06C02BR01179.6°179.7°
C06C07N18H60.2°0.8°
C08C04BR05C03179.9°180.0°
C08C04C03C020.2°0.1°
C08C04C03H1179.8°180.0°
C06C02C03C040.1°0.3°
C06C02C03BR01179.6°179.7°
C06C02C03H1179.8°179.8°
BR05C04C03C02179.9°179.9°
BR05C04C03H10.1°0.0°
C04C03C02H1180.0°179.9°
C04C03C02BR01179.7°180.0°
C03C02C06H2180.0°179.9°
BR01C02C03H10.3°0.1°
BR01C02C06H20.4°0.2°

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PDB entries from 2024-07-17

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