L7N

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O	C	doub	1.21Å	1.22Å
ND	C	sing	1.35Å	1.32Å
ND	OG	sing	1.41Å	1.34Å
C	CA	sing	1.52Å	1.49Å
C2A	C2	sing	1.51Å	1.51Å
OG	CB	sing	1.44Å	1.43Å
O1	C3	sing	1.36Å	1.33Å
O3P	P	doub	1.48Å	1.51Å
N	CA	sing	1.46Å	1.45Å
N	C4A	doub	1.29Å	1.33Å
C2	C3	doub	1.39Å	1.38Å	Aromatic
C2	N1	sing	1.32Å	1.35Å	Aromatic
CA	CB	sing	1.55Å	1.52Å
C3	C4	sing	1.40Å	1.38Å	Aromatic
N1	C6	doub	1.32Å	1.34Å	Aromatic
O4P	P	sing	1.61Å	1.61Å
O4P	C5A	sing	1.43Å	1.42Å
C4	C4A	sing	1.48Å	1.48Å
C4	C5	doub	1.40Å	1.39Å	Aromatic
C6	C5	sing	1.38Å	1.39Å	Aromatic
P	O2P	sing	1.61Å	1.51Å
P	O1P	sing	1.61Å	1.51Å
C5	C5A	sing	1.51Å	1.51Å
C6	H6	sing	1.08Å	1.08Å
CA	HA	sing	1.09Å	1.10Å
CB	HB2	sing	1.09Å	1.10Å
CB	HB1	sing	1.09Å	1.10Å
ND	H3	sing	0.97Å	1.00Å
C2A	H2A2	sing	1.09Å	1.10Å
C2A	H2A1	sing	1.09Å	1.10Å
C2A	H2A3	sing	1.09Å	1.10Å
C4A	H4A	sing	1.08Å	1.08Å
C5A	H5A2	sing	1.09Å	1.10Å
C5A	H5A1	sing	1.09Å	1.10Å
O1	H2	sing	0.97Å	0.95Å
O1P	H4	sing	0.97Å	0.95Å
O2P	H5	sing	0.97Å	0.95Å
N	H1	sing	0.97Å	1.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O	C	ND	124.8°	126.2°
O	C	CA	124.0°	126.3°
C	ND	OG	109.0°	111.7°
ND	C	CA	111.2°	107.5°
C	ND	H3	125.5°	124.1°
ND	OG	CB	108.6°	107.9°
OG	ND	H3	125.5°	124.2°
C	CA	N	111.3°	110.7°
C	CA	CB	98.9°	102.9°
C	CA	HA	109.4°	110.9°
C2A	C2	C3	120.1°	119.6°
C2A	C2	N1	119.6°	119.6°
C2	C2A	H2A2	109.5°	109.5°
C2	C2A	H2A1	109.5°	109.4°
C2	C2A	H2A3	109.5°	109.5°
OG	CB	CA	102.7°	102.6°
OG	CB	HB2	111.1°	110.8°
OG	CB	HB1	111.1°	111.0°
O1	C3	C2	120.1°	120.5°
O1	C3	C4	120.0°	120.6°
C3	O1	H2	109.5°	114.0°
O3P	P	O4P	108.0°	109.5°
O3P	P	O2P	110.2°	109.5°
O3P	P	O1P	110.7°	109.4°
CA	N	C4A	120.9°	120.0°
N	CA	CB	117.7°	110.7°
N	CA	HA	109.9°	110.7°
CA	N	H1	119.5°	120.0°
N	C4A	C4	120.2°	120.0°
N	C4A	H4A	119.9°	119.9°
C4A	N	H1	119.6°	120.0°
C3	C2	N1	120.3°	120.8°
C2	C3	C4	119.9°	118.9°
C2	N1	C6	121.0°	122.1°
CB	CA	HA	109.0°	110.8°
CA	CB	HB2	111.1°	110.8°
CA	CB	HB1	111.1°	110.8°
C3	C4	C4A	119.3°	121.0°
C3	C4	C5	118.8°	118.1°
N1	C6	C5	120.6°	121.1°
N1	C6	H6	119.7°	119.5°
P	O4P	C5A	120.5°	123.0°
O4P	P	O2P	109.0°	109.5°
O4P	P	O1P	108.6°	109.5°
O4P	C5A	C5	109.4°	109.5°
O4P	C5A	H5A2	109.5°	109.4°
O4P	C5A	H5A1	109.5°	109.5°
C4A	C4	C5	121.9°	120.9°
C4	C4A	H4A	119.9°	120.1°
C4	C5	C6	119.4°	119.0°
C4	C5	C5A	121.2°	120.5°
C6	C5	C5A	119.3°	120.5°
C5	C6	H6	119.7°	119.5°
O2P	P	O1P	110.1°	109.5°
P	O2P	H5	109.5°	114.0°
P	O1P	H4	109.5°	114.0°
C5	C5A	H5A2	109.5°	109.4°
C5	C5A	H5A1	109.5°	109.5°
HB2	CB	HB1	109.5°	110.7°
H2A2	C2A	H2A1	109.5°	109.5°
H2A2	C2A	H2A3	109.5°	109.5°
H2A1	C2A	H2A3	109.4°	109.5°
H5A2	C5A	H5A1	109.4°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O	C	ND	CA	179.1°	179.9°
O	C	ND	OG	176.0°	178.8°
O	C	CA	N	40.6°	46.5°
O	C	CA	CB	165.1°	164.9°
O	C	CA	HA	81.1°	76.7°
O	C	ND	H3	4.0°	1.2°
C	ND	OG	H3	180.0°	180.0°
C	ND	OG	CB	23.8°	18.7°
ND	C	CA	N	138.5°	133.5°
ND	C	CA	CB	14.0°	15.2°
ND	C	CA	HA	99.8°	103.2°
OG	ND	C	CA	4.9°	1.2°
ND	OG	CB	CA	31.9°	26.9°
ND	OG	CB	HB2	150.8°	91.4°
ND	OG	CB	HB1	87.0°	145.3°
C	CA	CB	OG	26.1°	25.2°
C	CA	N	CB	113.1°	113.4°
C	CA	N	HA	121.4°	123.4°
C	CA	N	C4A	176.5°	126.6°
C	CA	CB	HA	114.1°	118.5°
C	CA	CB	HB2	145.0°	93.1°
C	CA	CB	HB1	92.8°	143.7°
CA	C	ND	H3	175.1°	178.9°
C	CA	N	H1	3.5°	53.4°
C2A	C2	C3	O1	0.1°	0.3°
C2A	C2	C3	N1	179.9°	180.0°
C2A	C2	C3	C4	179.8°	180.0°
C2A	C2	N1	C6	180.0°	180.0°
C2	C2A	H2A2	H2A1	120.0°	120.0°
C2	C2A	H2A2	H2A3	120.0°	120.0°
C2	C2A	H2A1	H2A3	120.0°	120.0°
OG	CB	CA	N	145.9°	143.5°
OG	CB	CA	HB2	118.9°	118.2°
OG	CB	CA	HB1	118.9°	118.5°
OG	CB	CA	HA	88.0°	93.4°
OG	CB	HB2	HB1	123.1°	123.5°
CB	OG	ND	H3	156.2°	161.3°
O1	C3	C2	C4	179.9°	179.7°
O1	C3	C2	N1	180.0°	179.7°
O1	C3	C4	C4A	0.4°	0.4°
O1	C3	C4	C5	179.8°	179.7°
O3P	P	O4P	O2P	119.8°	120.0°
O3P	P	O4P	O1P	120.1°	120.0°
O3P	P	O4P	C5A	178.0°	55.1°
O3P	P	O2P	O1P	122.5°	119.9°
O3P	P	O1P	H4	0.0°	60.0°
O3P	P	O2P	H5	0.0°	180.0°
CA	N	C4A	H1	180.0°	180.0°
N	CA	CB	HA	126.1°	123.2°
CA	N	C4A	C4	179.2°	176.3°
N	CA	CB	HB2	95.2°	25.2°
N	CA	CB	HB1	27.0°	98.0°
CA	N	C4A	H4A	0.9°	3.7°
C4A	N	CA	CB	70.5°	120.0°
N	C4A	C4	C3	49.3°	5.6°
N	C4A	C4	H4A	180.0°	179.9°
N	C4A	C4	C5	131.4°	174.5°
C4A	N	CA	HA	55.1°	3.2°
C3	C2	N1	C6	0.2°	0.0°
C2	C3	C4	C4A	179.6°	180.0°
C2	C3	C4	C5	0.3°	0.1°
C3	C2	C2A	H2A2	179.9°	90.0°
C3	C2	C2A	H2A1	59.9°	150.0°
C3	C2	C2A	H2A3	60.1°	30.0°
C2	C3	O1	H2	180.0°	90.3°
N1	C2	C3	C4	0.1°	0.0°
C2	N1	C6	C5	0.2°	0.1°
C2	N1	C6	H6	179.8°	179.9°
N1	C2	C2A	H2A2	0.0°	89.9°
N1	C2	C2A	H2A1	120.0°	30.0°
N1	C2	C2A	H2A3	120.0°	150.0°
CA	CB	HB2	HB1	123.1°	123.3°
CB	CA	N	H1	109.5°	60.0°
C3	C4	C4A	C5	179.3°	179.9°
C3	C4	C5	C6	0.2°	0.1°
C3	C4	C5	C5A	179.9°	180.0°
C3	C4	C4A	H4A	130.7°	174.4°
C4	C3	O1	H2	0.1°	90.0°
N1	C6	C5	C4	0.0°	0.1°
N1	C6	C5	H6	180.0°	180.0°
N1	C6	C5	C5A	179.9°	180.0°
O4P	P	O2P	O1P	119.1°	120.0°
P	O4P	C5A	C5	177.6°	180.0°
P	O4P	C5A	H5A2	57.6°	60.1°
P	O4P	C5A	H5A1	62.4°	59.9°
O4P	P	O1P	H4	118.4°	180.0°
O4P	P	O2P	H5	118.4°	60.0°
O4P	C5A	C5	C4	75.6°	180.0°
O4P	C5A	C5	C6	104.3°	0.0°
C5A	O4P	P	O2P	62.2°	65.0°
C5A	O4P	P	O1P	57.9°	175.0°
O4P	C5A	C5	H5A2	120.0°	120.0°
O4P	C5A	C5	H5A1	120.0°	120.0°
O4P	C5A	H5A2	H5A1	120.1°	120.0°
C4A	C4	C5	C6	179.6°	180.0°
C4A	C4	C5	C5A	0.5°	0.1°
C4	C4A	N	H1	0.8°	3.6°
C4	C5	C6	C5A	179.9°	180.0°
C4	C5	C6	H6	180.0°	179.9°
C5	C4	C4A	H4A	48.6°	5.5°
C4	C5	C5A	H5A2	44.4°	60.1°
C4	C5	C5A	H5A1	164.4°	59.9°
C6	C5	C5A	H5A2	135.7°	120.0°
C6	C5	C5A	H5A1	15.7°	120.0°
O2P	P	O1P	H4	122.2°	60.0°
O1P	P	O2P	H5	122.5°	60.0°
C5A	C5	C6	H6	0.1°	0.0°
C5	C5A	H5A2	H5A1	120.0°	120.0°
HA	CA	CB	HB2	30.9°	148.4°
HA	CA	CB	HB1	153.1°	25.1°
HA	CA	N	H1	124.9°	176.8°
H2A2	C2A	H2A1	H2A3	120.0°	120.0°
H4A	C4A	N	H1	179.2°	176.3°

Release date:	2020-04-01
Definition date:	2019-07-26
Last modified:	2020-03-27
Release status:	REL
Processing site:	PDBE
Derived from:	6SCZ