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SummaryGeometryRelated PDB entries

L6Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAVCAUdoub1.38Å1.39ÅAromatic
CAVCAWsing1.38Å1.38ÅAromatic
CAUCATsing1.38Å1.40ÅAromatic
CAWCARdoub1.40Å1.39ÅAromatic
CATCASdoub1.38Å1.40ÅAromatic
CARCASsing1.40Å1.39ÅAromatic
CARCAPsing1.48Å1.40Å
OAQCAPdoub1.21Å1.23Å
CAPCAAsing1.48Å1.40Å
CAACABsing1.39Å1.40ÅAromatic
CAACAFdoub1.42Å1.39ÅAromatic
CABCACdoub1.39Å1.40ÅAromatic
CAGCAFsing1.40Å1.39ÅAromatic
CAGCAHdoub1.37Å1.39ÅAromatic
CAFCAEsing1.41Å1.39ÅAromatic
CAHCAIsing1.39Å1.39ÅAromatic
CACCADsing1.39Å1.39ÅAromatic
CAECADdoub1.41Å1.39ÅAromatic
CAECAJsing1.41Å1.38ÅAromatic
CADCANsing1.47Å1.40Å
CAICAJdoub1.39Å1.39ÅAromatic
CAJCAKsing1.47Å1.39Å
CANOAOdoub1.22Å1.24Å
CANNAMsing1.35Å1.35Å
CAKNAMsing1.35Å1.36Å
CAKOALdoub1.22Å1.23Å
NAMOAXsing1.42Å1.42Å
OAXH1sing0.97Å0.95Å
CAIH2sing1.08Å1.08Å
CAHH3sing1.08Å1.08Å
CAGH4sing1.08Å1.08Å
CACH5sing1.08Å1.08Å
CABH6sing1.08Å1.08Å
CASH7sing1.08Å1.08Å
CATH8sing1.08Å1.08Å
CAUH9sing1.08Å1.08Å
CAVH10sing1.08Å1.08Å
CAWH11sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAUCAVCAW119.5°120.2°
CAVCAUCAT119.7°120.3°
CAVCAUH9120.2°119.9°
CAUCAVH10120.2°119.9°
CAVCAWCAR120.7°119.8°
CAWCAVH10120.2°120.0°
CAVCAWH11119.7°120.1°
CAUCATCAS120.8°120.2°
CAUCATH8119.6°119.9°
CATCAUH9120.1°119.8°
CAWCARCAS120.6°119.7°
CAWCARCAP117.5°120.1°
CARCAWH11119.7°120.1°
CATCASCAR118.7°119.8°
CATCASH7120.6°120.1°
CASCATH8119.6°119.9°
CASCARCAP121.9°120.1°
CARCASH7120.7°120.1°
CARCAPOAQ119.7°120.0°
CARCAPCAA120.0°120.0°
OAQCAPCAA120.2°120.0°
CAPCAACAB122.5°120.2°
CAPCAACAF118.1°120.2°
CABCAACAF119.3°119.6°
CAACABCAC120.3°121.2°
CAACABH6119.9°119.4°
CAACAFCAG120.0°122.1°
CAACAFCAE120.2°118.9°
CABCACCAD120.1°120.4°
CABCACH5120.0°119.8°
CACCABH6119.8°119.4°
CAFCAGCAH119.9°120.1°
CAGCAFCAE119.8°119.1°
CAFCAGH4120.1°120.0°
CAGCAHCAI120.5°121.5°
CAGCAHH3119.7°119.3°
CAHCAGH4120.1°120.0°
CAFCAECAD120.8°120.5°
CAFCAECAJ119.9°120.1°
CAHCAICAJ119.3°120.1°
CAHCAIH2120.4°120.0°
CAICAHH3119.8°119.2°
CACCADCAE119.3°119.4°
CACCADCAN120.6°121.9°
CADCACH5119.9°119.8°
CADCAECAJ119.2°119.4°
CAECADCAN120.1°118.6°
CAECAJCAI120.6°119.1°
CAECAJCAK119.1°118.8°
CADCANOAO120.7°119.8°
CADCANNAM119.6°120.4°
CAICAJCAK120.3°122.1°
CAJCAIH2120.4°119.9°
CAJCAKNAM120.9°120.3°
CAJCAKOAL119.4°119.8°
OAOCANNAM119.6°119.8°
CANNAMCAK121.0°122.5°
CANNAMOAX119.6°118.8°
NAMCAKOAL119.7°119.9°
CAKNAMOAX119.4°118.8°
NAMOAXH1109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAUCAVCAWH10180.0°179.7°
CAVCAUCATH9180.0°180.0°
CAUCAVCAWCAR0.2°0.6°
CAVCAUCATCAS0.4°0.1°
CAVCAUCATH8179.6°180.0°
CAUCAVCAWH11179.8°180.0°
CAWCAVCAUCAT0.7°0.3°
CAVCAWCARH11180.0°179.4°
CAVCAWCARCAS0.7°0.6°
CAVCAWCARCAP178.9°179.7°
CAWCAVCAUH9179.3°179.8°
CAUCATCASH8180.0°179.9°
CAUCATCASCAR0.5°0.1°
CAUCATCASH7179.6°180.0°
CATCAUCAVH10179.3°180.0°
CAWCARCASCAT1.0°0.3°
CAWCARCASCAP178.1°179.7°
CAWCARCAPOAQ37.4°174.2°
CAWCARCAPCAA140.1°5.8°
CAWCARCASH7179.1°179.7°
CARCAWCAVH10179.8°179.7°
CATCASCARH7180.0°180.0°
CATCASCARCAP179.1°179.9°
CASCATCAUH9179.7°179.9°
CASCARCAPOAQ140.8°5.4°
CASCARCAPCAA41.7°174.5°
CARCASCATH8179.6°180.0°
CASCARCAWH11179.4°180.0°
CARCAPOAQCAA177.4°180.0°
CARCAPCAACAB36.9°104.3°
CARCAPCAACAF145.2°76.2°
CAPCARCASH70.9°0.0°
CAPCARCAWH111.1°0.4°
OAQCAPCAACAB140.5°75.8°
OAQCAPCAACAF37.4°103.7°
CAPCAACABCAF177.9°179.5°
CAPCAACABCAC179.5°180.0°
CAPCAACAFCAG0.9°0.0°
CAPCAACAFCAE178.6°180.0°
CAPCAACABH60.5°0.2°
CAACABCACH6180.0°179.7°
CABCAACAFCAG178.9°179.5°
CABCAACAFCAE0.6°0.5°
CAACABCACCAD1.4°0.3°
CAACABCACH5178.6°179.7°
CAFCAACABCAC1.6°0.6°
CAACAFCAGCAE179.5°180.0°
CAACAFCAGCAH179.7°180.0°
CAACAFCAECAD0.5°0.3°
CAACAFCAECAJ179.2°180.0°
CAACAFCAGH40.3°0.0°
CAFCAACABH6178.5°179.7°
CABCACCADH5180.0°180.0°
CABCACCADCAE0.3°0.0°
CABCACCADCAN179.5°179.7°
CAFCAGCAHH4180.0°180.0°
CAFCAGCAHCAI0.6°0.1°
CAGCAFCAECAD180.0°179.8°
CAGCAFCAECAJ1.3°0.0°
CAFCAGCAHH3179.4°180.0°
CAHCAGCAFCAE0.8°0.0°
CAGCAHCAIH3180.0°179.9°
CAGCAHCAICAJ0.9°0.1°
CAGCAHCAIH2179.1°180.0°
CAFCAECADCAC0.7°0.0°
CAFCAECADCAJ178.7°179.7°
CAFCAECADCAN179.6°179.7°
CAFCAECAJCAI1.6°0.0°
CAFCAECAJCAK179.9°180.0°
CAECAFCAGH4179.2°180.0°
CAHCAICAJCAE1.4°0.1°
CAHCAICAJH2180.0°179.9°
CAHCAICAJCAK179.9°179.9°
CAICAHCAGH4179.4°180.0°
CACCADCAECAN179.7°179.7°
CACCADCAECAJ179.4°179.7°
CACCADCANOAO0.1°0.0°
CACCADCANNAM179.9°179.8°
CADCACCABH6178.6°180.0°
CADCAECAJCAI179.7°179.7°
CADCAECAJCAK1.2°0.3°
CAECADCANOAO179.9°179.8°
CAECADCANNAM0.1°0.5°
CAECADCACH5179.7°180.0°
CAJCAECADCAN0.9°0.5°
CAECAJCAICAK178.5°180.0°
CAECAJCAKNAM0.7°0.0°
CAECAJCAKOAL179.4°180.0°
CAECAJCAIH2178.6°180.0°
CADCANOAONAM180.0°179.7°
CADCANNAMCAK0.3°0.2°
CADCANNAMOAX179.4°179.7°
CANCADCACH50.5°0.3°
CAICAJCAKNAM179.3°180.0°
CAICAJCAKOAL0.9°0.0°
CAJCAICAHH3179.1°179.9°
CAJCAKNAMCAN0.0°0.1°
CAJCAKNAMOAL179.9°180.0°
CAJCAKNAMOAX179.1°180.0°
CAKCAJCAIH20.1°0.0°
OAOCANNAMCAK179.7°179.9°
OAOCANNAMOAX0.6°0.0°
CANNAMCAKOAX179.1°179.9°
CANNAMCAKOAL179.9°180.0°
CANNAMOAXH1179.5°179.9°
CAKNAMOAXH10.4°0.0°
OALCAKNAMOAX0.8°0.1°
H2CAICAHH30.9°0.1°
H3CAHCAGH40.6°0.0°
H5CACCABH61.4°0.0°
H7CASCATH80.4°0.1°
H8CATCAUH90.4°0.0°
H9CAUCAVH100.7°0.0°
H10CAVCAWH110.2°0.3°

223166

PDB entries from 2024-07-31

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