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Summary Geometry Related PDB entries

L6X

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O11	C10	doub	1.22Å	1.25Å
C10	O12	sing	1.35Å	1.25Å
C10	C01	sing	1.47Å	1.52Å
C06	C01	doub	1.40Å	1.38Å	Aromatic
C06	C05	sing	1.38Å	1.39Å	Aromatic
C01	C02	sing	1.40Å	1.38Å	Aromatic
C05	C04	doub	1.39Å	1.39Å	Aromatic
C02	C03	doub	1.38Å	1.38Å	Aromatic
C04	C03	sing	1.39Å	1.38Å	Aromatic
C04	O07	sing	1.36Å	1.40Å
C08	O07	sing	1.43Å	1.40Å
C03	O09	sing	1.36Å	1.40Å
C02	H1	sing	1.08Å	1.08Å
C05	H2	sing	1.08Å	1.08Å
C06	H3	sing	1.08Å	1.08Å
C08	H4	sing	1.09Å	1.10Å
C08	H5	sing	1.09Å	1.10Å
C08	H6	sing	1.09Å	1.10Å
O09	H7	sing	0.97Å	0.95Å
O12	H8	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O11	C10	O12	121.8°	120.0°
O11	C10	C01	119.6°	120.0°
O12	C10	C01	118.6°	120.0°
C10	O12	H8	109.5°	117.0°
C10	C01	C06	120.8°	120.1°
C10	C01	C02	118.0°	120.1°
C01	C06	C05	119.5°	120.0°
C06	C01	C02	121.3°	119.8°
C01	C06	H3	120.2°	120.0°
C06	C05	C04	119.3°	120.1°
C06	C05	H2	120.3°	119.9°
C05	C06	H3	120.2°	120.0°
C01	C02	C03	119.1°	119.9°
C01	C02	H1	120.5°	120.1°
C05	C04	C03	120.8°	120.2°
C05	C04	O07	120.7°	119.9°
C04	C05	H2	120.3°	119.9°
C02	C03	C04	120.0°	120.0°
C02	C03	O09	119.6°	120.0°
C03	C02	H1	120.5°	120.1°
C03	C04	O07	118.6°	119.9°
C04	C03	O09	120.4°	120.0°
C04	O07	C08	113.7°	117.0°
O07	C08	H4	109.5°	109.5°
O07	C08	H5	109.4°	109.4°
O07	C08	H6	109.5°	109.4°
C03	O09	H7	109.5°	114.0°
H4	C08	H5	109.5°	109.5°
H4	C08	H6	109.5°	109.5°
H5	C08	H6	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O11	C10	O12	C01	178.2°	180.0°
O11	C10	C01	C06	9.2°	179.7°
O11	C10	C01	C02	169.5°	0.0°
O11	C10	O12	H8	0.0°	0.0°
O12	C10	C01	C06	172.5°	0.3°
O12	C10	C01	C02	8.8°	180.0°
C10	C01	C06	C02	178.6°	179.7°
C10	C01	C06	C05	178.9°	179.7°
C10	C01	C02	C03	179.1°	179.7°
C10	C01	C02	H1	0.9°	0.3°
C10	C01	C06	H3	1.2°	0.3°
C01	C10	O12	H8	178.2°	180.0°
C01	C06	C05	H3	180.0°	180.0°
C01	C06	C05	C04	0.3°	0.1°
C06	C01	C02	C03	0.4°	0.0°
C06	C01	C02	H1	179.6°	180.0°
C01	C06	C05	H2	179.7°	180.0°
C05	C06	C01	C02	0.2°	0.0°
C06	C05	C04	H2	180.0°	179.9°
C06	C05	C04	C03	0.6°	0.1°
C06	C05	C04	O07	179.6°	179.9°
C01	C02	C03	H1	180.0°	180.0°
C01	C02	C03	C04	0.0°	0.0°
C01	C02	C03	O09	179.8°	180.0°
C02	C01	C06	H3	179.8°	180.0°
C05	C04	C03	C02	0.5°	0.0°
C05	C04	C03	O07	179.7°	180.0°
C05	C04	O07	C08	19.9°	0.0°
C05	C04	C03	O09	179.3°	180.0°
C04	C05	C06	H3	179.7°	180.0°
C02	C03	C04	O09	179.8°	179.9°
C02	C03	C04	O07	179.8°	180.0°
C02	C03	O09	H7	180.0°	90.0°
C03	C04	O07	C08	159.8°	180.0°
C04	C03	C02	H1	179.9°	180.0°
C03	C04	C05	H2	179.4°	180.0°
C04	C03	O09	H7	0.2°	90.0°
O07	C04	C03	O09	0.5°	0.0°
O07	C04	C05	H2	0.4°	0.0°
C04	O07	C08	H4	180.0°	60.0°
C04	O07	C08	H5	60.0°	60.0°
C04	O07	C08	H6	60.0°	180.0°
O07	C08	H4	H5	120.0°	120.0°
O07	C08	H4	H6	120.0°	119.9°
O07	C08	H5	H6	120.0°	120.0°
O09	C03	C02	H1	0.2°	0.0°
H2	C05	C06	H3	0.3°	0.1°
H4	C08	H5	H6	120.0°	120.1°

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