L5P

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O11	P9	doub	1.48Å	1.48Å
P9	O8	sing	1.61Å	1.57Å
P9	O10	sing	1.61Å	1.48Å
P9	O12	sing	1.61Å	1.48Å
O8	C7	sing	1.43Å	1.40Å
O14	C6	sing	1.43Å	1.42Å
C6	C7	sing	1.53Å	1.50Å
C6	C5	sing	1.53Å	1.50Å
N	CA	sing	1.47Å	1.45Å
CD	CG	sing	1.53Å	1.51Å
CD	CE	sing	1.53Å	1.51Å
O4	C3	doub	1.21Å	1.22Å
NZ	CE	sing	1.47Å	1.46Å
NZ	C2	sing	1.47Å	1.47Å
CG	CB	sing	1.53Å	1.49Å
O	C1	doub	1.21Å	1.23Å
CB	CA	sing	1.53Å	1.52Å
C3	C5	sing	1.51Å	1.49Å
C3	C2	sing	1.51Å	1.49Å
C5	O13	sing	1.43Å	1.43Å
CA	C1	sing	1.51Å	1.51Å
N	H1	sing	1.01Å	1.00Å
N	H2	sing	1.01Å	1.00Å
CA	H4	sing	1.09Å	1.10Å
CB	H5	sing	1.09Å	1.10Å
CB	H6	sing	1.09Å	1.10Å
CG	H7	sing	1.09Å	1.10Å
CG	H8	sing	1.09Å	1.10Å
CD	H9	sing	1.09Å	1.10Å
CD	H10	sing	1.09Å	1.10Å
CE	H11	sing	1.09Å	1.10Å
CE	H12	sing	1.09Å	1.10Å
NZ	H13	sing	1.01Å	1.00Å
C1	OXT	sing	1.34Å	1.08Å
C2	H16	sing	1.09Å	1.10Å
C2	H17	sing	1.09Å	1.10Å
C5	H18	sing	1.09Å	1.10Å
O13	H19	sing	0.97Å	0.95Å
C6	H20	sing	1.09Å	1.10Å
O14	H21	sing	0.97Å	0.95Å
C7	H22	sing	1.09Å	1.10Å
C7	H23	sing	1.09Å	1.10Å
O12	H24	sing	0.97Å	0.95Å
O10	H25	sing	0.97Å	0.95Å
OXT	HXT	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O11	P9	O8	100.4°	109.5°
O11	P9	O10	112.1°	109.5°
O11	P9	O12	117.1°	109.5°
O8	P9	O10	109.2°	109.5°
O8	P9	O12	102.4°	109.5°
P9	O8	C7	121.1°	123.0°
O10	P9	O12	113.9°	109.5°
P9	O10	H25	109.5°	114.0°
P9	O12	H24	109.5°	114.0°
O8	C7	C6	103.6°	109.5°
O8	C7	H22	110.9°	109.5°
O8	C7	H23	110.9°	109.5°
O14	C6	C7	108.4°	109.5°
O14	C6	C5	107.8°	109.4°
O14	C6	H20	110.8°	109.5°
C6	O14	H21	109.5°	114.0°
C7	C6	C5	110.3°	109.5°
C7	C6	H20	109.7°	109.5°
C6	C7	H22	110.9°	109.4°
C6	C7	H23	110.9°	109.5°
C6	C5	C3	109.2°	109.5°
C6	C5	O13	107.8°	109.4°
C6	C5	H18	109.6°	109.5°
C5	C6	H20	109.8°	109.5°
N	CA	CB	110.2°	109.5°
N	CA	C1	114.4°	109.4°
CA	N	H1	109.5°	111.0°
CA	N	H2	109.5°	111.0°
N	CA	H4	108.8°	109.5°
CG	CD	CE	101.8°	109.5°
CD	CG	CB	111.8°	109.5°
CD	CG	H7	108.9°	109.5°
CD	CG	H8	108.9°	109.5°
CG	CD	H9	111.4°	109.4°
CG	CD	H10	111.4°	109.5°
CD	CE	NZ	117.1°	109.5°
CE	CD	H9	111.4°	109.5°
CE	CD	H10	111.4°	109.5°
CD	CE	H11	107.5°	109.5°
CD	CE	H12	107.5°	109.5°
O4	C3	C5	122.4°	120.1°
O4	C3	C2	120.4°	120.0°
CE	NZ	C2	108.5°	111.0°
NZ	CE	H11	107.5°	109.5°
NZ	CE	H12	107.5°	109.5°
CE	NZ	H13	109.7°	111.0°
NZ	C2	C3	111.2°	109.5°
C2	NZ	H13	109.7°	111.0°
NZ	C2	H16	109.0°	109.5°
NZ	C2	H17	109.0°	109.5°
CG	CB	CA	107.0°	109.4°
CG	CB	H5	110.1°	109.5°
CG	CB	H6	110.1°	109.5°
CB	CG	H7	108.9°	109.5°
CB	CG	H8	108.9°	109.5°
O	C1	CA	120.1°	120.0°
O	C1	OXT	119.9°	120.0°
CB	CA	C1	107.2°	109.5°
CB	CA	H4	107.9°	109.5°
CA	CB	H5	110.1°	109.4°
CA	CB	H6	110.1°	109.5°
C5	C3	C2	117.2°	119.9°
C3	C5	O13	109.7°	109.5°
C3	C5	H18	109.8°	109.5°
C3	C2	H16	109.0°	109.5°
C3	C2	H17	109.1°	109.5°
O13	C5	H18	110.7°	109.5°
C5	O13	H19	109.5°	114.0°
C1	CA	H4	108.1°	109.4°
CA	C1	OXT	119.9°	120.0°
H1	N	H2	109.4°	111.0°
H5	CB	H6	109.5°	109.5°
H7	CG	H8	109.5°	109.4°
H9	CD	H10	109.5°	109.5°
H11	CE	H12	109.4°	109.4°
C1	OXT	HXT	109.5°	117.0°
H16	C2	H17	109.5°	109.5°
H22	C7	H23	109.5°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O11	P9	O8	O10	118.0°	120.0°
O11	P9	O8	O12	121.0°	120.0°
O11	P9	O10	O12	135.8°	120.0°
O11	P9	O8	C7	157.6°	55.0°
O11	P9	O12	H24	0.0°	179.9°
O11	P9	O10	H25	0.0°	60.0°
O8	P9	O10	O12	113.8°	120.0°
P9	O8	C7	C6	158.9°	180.0°
P9	O8	C7	H22	82.0°	60.0°
P9	O8	C7	H23	39.8°	60.0°
O8	P9	O12	H24	108.7°	59.9°
O8	P9	O10	H25	110.4°	180.0°
O10	P9	O8	C7	39.6°	175.0°
O10	P9	O12	H24	133.5°	60.1°
O12	P9	O8	C7	81.4°	65.0°
O12	P9	O10	H25	135.8°	60.0°
O8	C7	C6	O14	51.2°	65.1°
O8	C7	C6	H22	119.0°	120.0°
O8	C7	C6	H23	119.1°	120.1°
O8	C7	C6	C5	169.1°	175.0°
O8	C7	C6	H20	69.9°	55.0°
O8	C7	H22	H23	122.7°	120.0°
O14	C6	C7	C5	117.9°	119.9°
O14	C6	C7	H20	121.1°	120.0°
O14	C6	C5	H20	120.8°	120.0°
O14	C6	C5	C3	72.2°	60.1°
O14	C6	C5	O13	168.7°	180.0°
O14	C6	C5	H18	48.1°	60.0°
O14	C6	C7	H22	67.8°	175.0°
O14	C6	C7	H23	170.3°	55.0°
C7	C6	C5	H20	121.0°	120.1°
C7	C6	C5	C3	169.6°	180.0°
C7	C6	C5	O13	50.5°	60.0°
C7	C6	C5	H18	70.1°	59.9°
C7	C6	O14	H21	160.5°	59.9°
C6	C7	H22	H23	122.8°	120.0°
C6	C5	C3	O4	59.4°	99.9°
C6	C5	C3	O13	118.0°	119.9°
C6	C5	C3	H18	120.2°	120.1°
C6	C5	C3	C2	121.9°	80.1°
C6	C5	O13	H18	119.9°	120.0°
C6	C5	O13	H19	180.0°	60.1°
C5	C6	O14	H21	41.1°	60.1°
C5	C6	C7	H22	50.0°	55.1°
C5	C6	C7	H23	71.9°	64.9°
N	CA	CB	CG	66.4°	65.0°
N	CA	C1	O	37.5°	20.0°
N	CA	CB	C1	125.1°	120.0°
N	CA	CB	H4	118.7°	120.0°
N	CA	C1	H4	121.4°	120.0°
CA	N	H1	H2	120.0°	124.0°
N	CA	CB	H5	174.0°	54.9°
N	CA	CB	H6	53.3°	175.0°
N	CA	C1	OXT	142.5°	160.1°
CG	CD	CE	H9	118.7°	119.9°
CG	CD	CE	H10	118.8°	120.0°
CG	CD	CE	NZ	147.8°	180.0°
CD	CG	CB	H7	120.4°	120.0°
CD	CG	CB	H8	120.4°	120.0°
CD	CG	CB	CA	175.2°	180.0°
CD	CG	CB	H5	65.2°	60.1°
CD	CG	CB	H6	55.6°	60.0°
CD	CG	H7	H8	119.0°	120.0°
CG	CD	H9	H10	123.6°	120.0°
CG	CD	CE	H11	91.0°	60.0°
CG	CD	CE	H12	26.7°	60.0°
CD	CE	NZ	H11	121.1°	120.0°
CD	CE	NZ	H12	121.1°	120.0°
CD	CE	NZ	C2	169.1°	180.0°
CE	CD	CG	CB	141.6°	180.0°
CE	CD	CG	H7	98.0°	60.0°
CE	CD	CG	H8	21.3°	60.0°
CE	CD	H9	H10	123.6°	120.1°
CD	CE	H11	H12	116.5°	120.0°
CD	CE	NZ	H13	71.0°	56.1°
O4	C3	C2	NZ	51.4°	0.0°
O4	C3	C5	C2	178.7°	180.0°
O4	C3	C5	O13	177.4°	20.0°
O4	C3	C2	H16	171.6°	120.0°
O4	C3	C2	H17	68.9°	120.0°
O4	C3	C5	H18	60.8°	140.0°
CE	NZ	C2	H13	119.9°	123.9°
CE	NZ	C2	C3	141.1°	180.0°
NZ	CE	CD	H9	29.1°	60.1°
NZ	CE	CD	H10	93.4°	60.0°
NZ	CE	H11	H12	116.5°	120.0°
CE	NZ	C2	H16	98.7°	60.0°
CE	NZ	C2	H17	20.8°	60.0°
NZ	C2	C3	C5	129.9°	180.0°
NZ	C2	C3	H16	120.2°	120.0°
NZ	C2	C3	H17	120.3°	120.0°
C2	NZ	CE	H11	48.0°	60.0°
C2	NZ	CE	H12	69.8°	60.0°
NZ	C2	H16	H17	119.2°	120.0°
CG	CB	CA	H5	119.6°	120.0°
CG	CB	CA	H6	119.6°	120.0°
CG	CB	CA	C1	168.6°	175.0°
CG	CB	CA	H4	52.3°	55.0°
CG	CB	H5	H6	121.2°	120.1°
CB	CG	H7	H8	118.9°	120.0°
CB	CG	CD	H9	99.6°	60.0°
CB	CG	CD	H10	22.9°	60.0°
O	C1	CA	CB	84.9°	100.0°
O	C1	CA	OXT	180.0°	179.9°
O	C1	CA	H4	159.0°	140.0°
O	C1	OXT	HXT	0.0°	0.1°
CB	CA	C1	H4	116.1°	120.0°
CB	CA	N	H1	180.0°	176.0°
CB	CA	N	H2	60.0°	60.0°
CA	CB	H5	H6	121.1°	120.0°
CA	CB	CG	H7	54.8°	60.0°
CA	CB	CG	H8	64.4°	60.0°
CB	CA	C1	OXT	95.1°	79.9°
C3	C5	O13	H18	121.3°	120.1°
C5	C3	C2	H16	9.7°	60.0°
C5	C3	C2	H17	109.8°	60.0°
C3	C5	O13	H19	61.2°	59.9°
C3	C5	C6	H20	48.7°	59.9°
C2	C3	C5	O13	4.0°	160.0°
C3	C2	NZ	H13	21.2°	56.1°
C3	C2	H16	H17	119.2°	120.0°
C2	C3	C5	H18	117.9°	40.0°
O13	C5	C6	H20	70.5°	60.0°
C1	CA	N	H1	59.2°	64.0°
C1	CA	N	H2	60.8°	60.0°
C1	CA	CB	H5	49.0°	65.0°
C1	CA	CB	H6	71.8°	55.0°
CA	C1	OXT	HXT	180.0°	180.0°
H1	N	CA	H4	61.9°	56.0°
H2	N	CA	H4	178.2°	179.9°
H4	CA	CB	H5	67.3°	175.0°
H4	CA	CB	H6	172.0°	65.0°
H4	CA	C1	OXT	21.0°	40.1°
H5	CB	CG	H7	174.4°	179.9°
H5	CB	CG	H8	55.2°	60.0°
H6	CB	CG	H7	64.8°	60.0°
H6	CB	CG	H8	176.0°	180.0°
H7	CG	CD	H9	20.7°	180.0°
H7	CG	CD	H10	143.2°	60.0°
H8	CG	CD	H9	140.1°	60.0°
H8	CG	CD	H10	97.5°	180.0°
H9	CD	CE	H11	150.2°	179.9°
H9	CD	CE	H12	92.0°	60.0°
H10	CD	CE	H11	27.7°	60.0°
H10	CD	CE	H12	145.5°	180.0°
H11	CE	NZ	H13	167.9°	176.1°
H12	CE	NZ	H13	50.1°	64.0°
H13	NZ	C2	H16	141.5°	176.1°
H13	NZ	C2	H17	99.0°	64.0°
H18	C5	O13	H19	60.1°	180.0°
H18	C5	C6	H20	168.9°	180.0°
H20	C6	O14	H21	79.1°	180.0°
H20	C6	C7	H22	171.0°	65.0°
H20	C6	C7	H23	49.1°	175.1°

Release date:	2015-01-14
Definition date:	2014-11-17
Last modified:	2024-09-27
Release status:	REL
Processing site:	RCSB
Derived from:	4WXY