Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

L5J

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O20C18doub1.21Å1.26Å
O19C18sing1.34Å1.26Å
C18C17sing1.51Å1.52Å
C17C02sing1.51Å1.52Å
C02C01doub1.38Å1.52ÅAromatic
C02C03sing1.38Å1.52ÅAromatic
C01C06sing1.38Å1.53ÅAromatic
C03C04doub1.38Å1.52ÅAromatic
C06C05doub1.38Å1.53ÅAromatic
C04C05sing1.38Å1.52ÅAromatic
C05C07sing1.51Å1.52Å
O15C09doub1.21Å1.26Å
C07C10sing1.53Å1.57Å
C09O16sing1.34Å1.26Å
C09C08sing1.51Å1.53Å
C12C10sing1.54Å1.37Å
C12C13sing1.55Å1.66Å
C10C11sing1.54Å1.60Å
C11C08sing1.53Å1.43Å
C11C14sing1.54Å1.60Å
C14C13sing1.55Å1.38Å
C10H1sing1.09Å1.10Å
C13H2sing1.09Å1.10Å
C13H3sing1.09Å1.10Å
C11H4sing1.09Å1.10Å
C12H5sing1.09Å1.10Å
C12H6sing1.09Å1.10Å
C14H7sing1.09Å1.10Å
C14H8sing1.09Å1.10Å
C01H9sing1.08Å1.08Å
C03H10sing1.08Å1.08Å
C04H11sing1.08Å1.08Å
C06H12sing1.08Å1.08Å
C07H13sing1.09Å1.10Å
C07H14sing1.09Å1.10Å
C08H15sing1.09Å1.10Å
C08H16sing1.09Å1.10Å
C17H17sing1.09Å1.10Å
C17H18sing1.09Å1.10Å
O16H19sing0.97Å0.95Å
O19H20sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O20C18O19120.8°120.0°
O20C18C17119.3°120.0°
O19C18C17120.0°120.0°
C18O19H20109.5°117.0°
C18C17C02111.2°109.4°
C18C17H17109.1°109.5°
C18C17H18109.1°109.4°
C17C02C01120.5°120.0°
C17C02C03119.5°120.0°
C02C17H17109.0°109.5°
C02C17H18109.0°109.5°
C01C02C03120.1°119.9°
C02C01C06119.9°120.0°
C02C01H9120.1°119.9°
C02C03C04120.1°120.1°
C02C03H10120.0°120.0°
C01C06C05119.8°120.0°
C06C01H9120.0°120.0°
C01C06H12120.1°120.0°
C03C04C05120.1°120.0°
C04C03H10119.9°120.0°
C03C04H11119.9°120.0°
C06C05C04119.9°120.0°
C06C05C07123.3°120.0°
C05C06H12120.1°120.0°
C04C05C07116.8°120.0°
C05C04H11119.9°120.0°
C05C07C10121.0°109.5°
C05C07H13106.5°109.4°
C05C07H14106.5°109.4°
O15C09O16119.6°120.0°
O15C09C08120.2°120.0°
C07C10C12116.2°110.1°
C07C10C11109.4°110.0°
C07C10H1108.3°110.0°
C10C07H13106.6°109.5°
C10C07H14106.5°109.5°
O16C09C08120.2°120.0°
C09O16H19109.5°117.0°
C09C08C11111.3°109.5°
C09C08H15109.0°109.4°
C09C08H16109.0°109.5°
C10C12C13103.4°104.2°
C12C10C11103.6°106.6°
C12C10H1111.0°110.0°
C10C12H5111.0°110.5°
C10C12H6111.0°110.5°
C12C13C14107.2°102.7°
C12C13H2110.0°110.8°
C12C13H3110.1°110.7°
C13C12H5111.0°110.5°
C13C12H6111.0°110.5°
C10C11C08112.0°110.0°
C10C11C14103.4°106.6°
C11C10H1108.0°110.0°
C10C11H4109.2°110.0°
C08C11C14111.1°110.0°
C08C11H4111.6°110.1°
C11C08H15109.0°109.5°
C11C08H16109.0°109.5°
C11C14C13106.4°104.2°
C14C11H4109.2°110.1°
C11C14H7110.2°110.5°
C11C14H8110.2°110.5°
C14C13H2110.1°110.8°
C14C13H3110.0°110.9°
C13C14H7110.2°110.5°
C13C14H8110.2°110.5°
H2C13H3109.5°110.7°
H5C12H6109.5°110.6°
H7C14H8109.5°110.5°
H13C07H14109.5°109.5°
H15C08H16109.5°109.4°
H17C17H18109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O20C18O19C17179.9°179.9°
O20C18C17C02115.9°0.1°
O20C18C17H17123.8°120.0°
O20C18C17H184.3°120.0°
O20C18O19H200.0°0.0°
O19C18C17C0263.9°180.0°
O19C18C17H1756.3°59.9°
O19C18C17H18175.8°60.1°
C18C17C02H17120.3°120.1°
C18C17C02H18120.3°119.9°
C18C17C02C0159.2°90.0°
C18C17C02C03120.4°90.1°
C18C17H17H18119.2°120.0°
C17C18O19H20179.9°179.9°
C17C02C01C03179.6°180.0°
C17C02C01C06179.8°179.9°
C17C02C03C04179.9°179.9°
C17C02C01H90.2°0.3°
C17C02C03H100.1°0.0°
C02C17H17H18119.2°120.0°
C02C01C06H9180.0°179.7°
C01C02C03C040.5°0.0°
C02C01C06C050.8°0.0°
C01C02C03H10179.5°179.9°
C02C01C06H12179.2°179.7°
C01C02C17H17179.5°150.0°
C01C02C17H1861.0°30.0°
C03C02C01C060.3°0.0°
C02C03C04H10180.0°179.9°
C02C03C04C050.4°0.0°
C03C02C01H9179.7°179.7°
C02C03C04H11179.6°180.0°
C03C02C17H170.1°30.0°
C03C02C17H18119.4°150.0°
C01C06C05H12180.0°179.7°
C01C06C05C041.7°0.0°
C01C06C05C07179.0°179.9°
C03C04C05C061.5°0.0°
C03C04C05H11180.0°180.0°
C03C04C05C07179.0°179.9°
C06C05C04C07177.5°179.9°
C06C05C07C1061.8°90.0°
C05C06C01H9179.2°179.7°
C06C05C04H11178.5°180.0°
C06C05C07H1359.8°150.0°
C06C05C07H14176.6°30.0°
C04C05C07C10120.8°90.0°
C05C04C03H10179.6°179.9°
C04C05C06H12178.3°179.7°
C04C05C07H13117.6°30.0°
C04C05C07H140.8°150.0°
C05C07C10H13121.6°120.0°
C05C07C10H14121.6°120.0°
C05C07C10C121.3°67.8°
C05C07C10C11115.5°175.0°
C05C07C10H1127.0°53.6°
C07C05C04H111.0°0.1°
C07C05C06H121.0°0.2°
C05C07H13H14114.8°119.9°
O15C09O16C08178.7°179.9°
O15C09C08C1145.8°0.1°
O15C09C08H1574.5°120.0°
O15C09C08H16166.1°120.0°
O15C09O16H190.0°0.1°
C07C10C12C11120.0°119.3°
C07C10C12H1124.3°121.4°
C07C10C12C13159.4°95.7°
C07C10C11H1117.7°121.4°
C07C10C11C0881.7°121.4°
C07C10C11C14158.5°119.3°
C07C10C11H442.4°0.0°
C07C10C12H581.6°145.6°
C07C10C12H640.3°22.9°
C10C07H13H14114.8°120.0°
O16C09C08C11133.0°180.0°
O16C09C08H15106.8°60.0°
O16C09C08H1612.6°59.9°
C09C08C11C1079.2°175.0°
C09C08C11H15120.3°120.0°
C09C08C11H16120.3°120.1°
C09C08C11C14165.8°67.9°
C09C08C11H443.6°53.6°
C09C08H15H16119.1°120.0°
C08C09O16H19178.7°180.0°
C10C12C13H5119.0°118.7°
C10C12C13H6119.0°118.7°
C12C10C11H1117.8°119.3°
C12C10C11C08153.8°119.3°
C12C10C11C1434.0°0.0°
C10C12C13C1433.9°37.9°
C10C12C13H285.8°156.3°
C10C12C13H3153.5°80.5°
C12C10C11H482.1°119.3°
C10C12H5H6122.8°122.6°
C12C10C07H13122.9°172.2°
C12C10C07H14120.3°52.2°
C13C12C10C1139.4°23.6°
C12C13C14C1110.7°37.9°
C12C13C14H2119.6°118.3°
C12C13C14H3119.7°118.3°
C13C12C10H176.3°142.9°
C12C13H2H3121.1°123.2°
C13C12H5H6122.8°122.6°
C12C13C14H7108.8°80.8°
C12C13C14H8130.2°156.6°
C10C11C08C14115.1°117.2°
C10C11C08H4122.8°121.4°
C10C11C14H4116.1°119.3°
C10C11C14C1311.8°23.6°
C11C10C12H5158.4°95.0°
C11C10C12H679.6°142.3°
C10C11C14H7131.4°95.1°
C10C11C14H8107.7°142.3°
C11C10C07H136.1°55.0°
C11C10C07H14122.9°65.0°
C10C11C08H15160.6°55.0°
C10C11C08H1641.1°65.0°
C08C11C14H4123.5°121.4°
C08C11C14C13132.2°142.9°
C08C11C10H135.9°0.0°
C08C11C14H7108.3°24.2°
C08C11C14H812.6°98.4°
C11C08H15H16119.1°120.0°
C11C14C13H7119.5°118.7°
C11C14C13H8119.5°118.7°
C14C11C10H183.8°119.3°
C11C14C13H2108.9°156.3°
C11C14C13H3130.4°80.4°
C11C14H7H8121.4°122.6°
C14C11C08H1545.5°172.2°
C14C11C08H1673.9°52.2°
C14C13H2H3121.1°123.5°
C13C14C11H4104.3°95.7°
C14C13C12H5152.9°80.7°
C14C13C12H685.1°156.6°
C13C14H7H8121.4°122.6°
H1C10C11H4160.0°121.4°
H1C10C12H542.7°24.3°
H1C10C12H6164.7°98.4°
H1C10C07H13111.4°66.4°
H1C10C07H145.4°173.6°
H2C13C12H533.2°37.6°
H2C13C12H6155.2°85.1°
H2C13C14H7131.6°37.6°
H2C13C14H810.6°85.0°
H3C13C12H587.5°160.8°
H3C13C12H634.5°38.2°
H3C13C14H710.8°160.9°
H3C13C14H8110.1°38.3°
H4C11C14H715.2°145.6°
H4C11C14H8136.2°23.0°
H4C11C08H1576.7°66.4°
H4C11C08H16163.9°173.6°
H9C01C06H120.8°0.0°
H10C03C04H110.4°0.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon