L2O
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.46Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | C2 | sing | 1.53Å | 1.46Å | |
| CA | C6 | sing | 1.53Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| C2 | C3 | sing | 1.53Å | 1.49Å | |
| C2 | H4 | sing | 1.09Å | 1.10Å | |
| C2 | H5 | sing | 1.09Å | 1.10Å | |
| C3 | C4 | sing | 1.53Å | 1.53Å | |
| C3 | C5 | sing | 1.53Å | 1.53Å | |
| C3 | H6 | sing | 1.09Å | 1.10Å | |
| C4 | H7 | sing | 1.09Å | 1.10Å | |
| C4 | H8 | sing | 1.09Å | 1.10Å | |
| C4 | H9 | sing | 1.09Å | 1.10Å | |
| C5 | H10 | sing | 1.09Å | 1.10Å | |
| C5 | H11 | sing | 1.09Å | 1.10Å | |
| C5 | H12 | sing | 1.09Å | 1.10Å | |
| C6 | C | sing | 1.51Å | 1.55Å | |
| C6 | O1 | sing | 1.43Å | 1.40Å | |
| C6 | H15 | sing | 1.09Å | 1.10Å | |
| O1 | H14 | sing | 0.97Å | 0.95Å | |
| C | O | doub | 1.21Å | 1.20Å | |
| C | OXT | sing | 1.34Å | 1.35Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.4° | 111.0° |
| N | CA | C2 | 102.9° | 109.5° |
| N | CA | C6 | 110.1° | 109.5° |
| N | CA | HA | 114.6° | 109.5° |
| H | N | H2 | 109.5° | 111.0° |
| C2 | CA | C6 | 113.1° | 109.5° |
| C2 | CA | HA | 111.7° | 109.5° |
| CA | C2 | C3 | 115.9° | 109.5° |
| CA | C2 | H4 | 107.4° | 109.4° |
| CA | C2 | H5 | 107.3° | 109.5° |
| C6 | CA | HA | 104.7° | 109.5° |
| CA | C6 | C | 109.3° | 109.5° |
| CA | C6 | O1 | 111.1° | 109.5° |
| CA | C6 | H15 | 109.1° | 109.5° |
| C3 | C2 | H4 | 107.4° | 109.5° |
| C3 | C2 | H5 | 107.4° | 109.5° |
| C2 | C3 | C4 | 109.6° | 109.5° |
| C2 | C3 | C5 | 107.1° | 109.5° |
| C2 | C3 | H6 | 110.8° | 109.4° |
| H4 | C2 | H5 | 111.5° | 109.5° |
| C4 | C3 | C5 | 109.0° | 109.5° |
| C4 | C3 | H6 | 108.9° | 109.5° |
| C3 | C4 | H7 | 109.5° | 109.5° |
| C3 | C4 | H8 | 109.5° | 109.5° |
| C3 | C4 | H9 | 109.5° | 109.5° |
| C5 | C3 | H6 | 111.4° | 109.5° |
| C3 | C5 | H10 | 109.5° | 109.5° |
| C3 | C5 | H11 | 109.5° | 109.5° |
| C3 | C5 | H12 | 109.4° | 109.5° |
| H7 | C4 | H8 | 109.4° | 109.5° |
| H7 | C4 | H9 | 109.5° | 109.4° |
| H8 | C4 | H9 | 109.5° | 109.5° |
| H10 | C5 | H11 | 109.4° | 109.4° |
| H10 | C5 | H12 | 109.4° | 109.4° |
| H11 | C5 | H12 | 109.5° | 109.5° |
| C | C6 | O1 | 111.2° | 109.5° |
| C | C6 | H15 | 109.0° | 109.5° |
| C6 | C | O | 127.9° | 120.0° |
| C6 | C | OXT | 110.7° | 120.0° |
| O1 | C6 | H15 | 107.1° | 109.5° |
| C6 | O1 | H14 | 109.5° | 114.0° |
| O | C | OXT | 121.5° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 120.0° | 123.9° |
| N | CA | C2 | C6 | 118.8° | 120.0° |
| N | CA | C2 | HA | 123.4° | 120.0° |
| N | CA | C6 | HA | 123.6° | 120.0° |
| N | CA | C2 | C3 | 122.6° | 65.0° |
| N | CA | C2 | H4 | 117.4° | 175.0° |
| N | CA | C2 | H5 | 2.5° | 55.0° |
| N | CA | C6 | C | 154.8° | 55.0° |
| N | CA | C6 | O1 | 31.7° | 65.0° |
| N | CA | C6 | H15 | 86.1° | 175.0° |
| H | N | CA | C2 | 180.0° | 60.0° |
| H | N | CA | C6 | 59.1° | 60.0° |
| H | N | CA | HA | 58.6° | 180.0° |
| H2 | N | CA | C2 | 60.0° | 176.1° |
| H2 | N | CA | C6 | 179.1° | 63.9° |
| H2 | N | CA | HA | 61.4° | 56.1° |
| C2 | CA | C6 | HA | 121.8° | 120.0° |
| CA | C2 | C3 | H4 | 120.0° | 120.0° |
| CA | C2 | C3 | H5 | 120.0° | 120.0° |
| CA | C2 | H4 | H5 | 117.3° | 120.0° |
| CA | C2 | C3 | C4 | 94.7° | 65.0° |
| CA | C2 | C3 | C5 | 23.4° | 175.0° |
| CA | C2 | C3 | H6 | 145.0° | 55.0° |
| C2 | CA | C6 | C | 90.6° | 175.0° |
| C2 | CA | C6 | O1 | 146.3° | 55.0° |
| C2 | CA | C6 | H15 | 28.4° | 65.0° |
| C6 | CA | C2 | C3 | 118.6° | 175.0° |
| C6 | CA | C2 | H4 | 1.4° | 55.0° |
| C6 | CA | C2 | H5 | 121.4° | 65.0° |
| CA | C6 | C | O1 | 123.0° | 120.0° |
| CA | C6 | C | H15 | 119.1° | 120.0° |
| CA | C6 | O1 | H15 | 119.0° | 120.0° |
| CA | C6 | O1 | H14 | 180.0° | 60.0° |
| CA | C6 | C | O | 34.1° | 115.0° |
| CA | C6 | C | OXT | 145.1° | 65.0° |
| HA | CA | C2 | C3 | 0.8° | 55.0° |
| HA | CA | C2 | H4 | 119.2° | 65.0° |
| HA | CA | C2 | H5 | 120.8° | 175.0° |
| HA | CA | C6 | C | 31.2° | 65.0° |
| HA | CA | C6 | O1 | 91.9° | 175.0° |
| HA | CA | C6 | H15 | 150.2° | 55.0° |
| C3 | C2 | H4 | H5 | 117.4° | 120.0° |
| C2 | C3 | C4 | C5 | 116.9° | 120.0° |
| C2 | C3 | C4 | H6 | 121.4° | 120.0° |
| C2 | C3 | C5 | H6 | 121.3° | 120.0° |
| C2 | C3 | C4 | H7 | 180.0° | 60.0° |
| C2 | C3 | C4 | H8 | 60.0° | 60.0° |
| C2 | C3 | C4 | H9 | 60.0° | 180.0° |
| C2 | C3 | C5 | H10 | 180.0° | 60.0° |
| C2 | C3 | C5 | H11 | 60.0° | 180.0° |
| C2 | C3 | C5 | H12 | 60.0° | 60.0° |
| H4 | C2 | C3 | C4 | 145.3° | 55.0° |
| H4 | C2 | C3 | C5 | 96.6° | 65.0° |
| H4 | C2 | C3 | H6 | 25.0° | 175.0° |
| H5 | C2 | C3 | C4 | 25.3° | 175.0° |
| H5 | C2 | C3 | C5 | 143.4° | 55.0° |
| H5 | C2 | C3 | H6 | 95.0° | 65.0° |
| C4 | C3 | C5 | H6 | 120.2° | 120.0° |
| C3 | C4 | H7 | H8 | 120.0° | 120.0° |
| C3 | C4 | H7 | H9 | 120.0° | 120.0° |
| C3 | C4 | H8 | H9 | 120.0° | 120.0° |
| C4 | C3 | C5 | H10 | 61.5° | 180.0° |
| C4 | C3 | C5 | H11 | 58.5° | 60.0° |
| C4 | C3 | C5 | H12 | 178.5° | 60.0° |
| C5 | C3 | C4 | H7 | 63.1° | 180.0° |
| C5 | C3 | C4 | H8 | 176.9° | 60.0° |
| C5 | C3 | C4 | H9 | 56.9° | 60.0° |
| C3 | C5 | H10 | H11 | 120.0° | 120.0° |
| C3 | C5 | H10 | H12 | 120.0° | 120.0° |
| C3 | C5 | H11 | H12 | 120.0° | 120.0° |
| H6 | C3 | C4 | H7 | 58.6° | 60.0° |
| H6 | C3 | C4 | H8 | 61.4° | 180.0° |
| H6 | C3 | C4 | H9 | 178.6° | 60.0° |
| H6 | C3 | C5 | H10 | 58.7° | 60.0° |
| H6 | C3 | C5 | H11 | 178.7° | 60.0° |
| H6 | C3 | C5 | H12 | 61.3° | 180.0° |
| H7 | C4 | H8 | H9 | 120.0° | 120.0° |
| H10 | C5 | H11 | H12 | 120.0° | 119.9° |
| C | C6 | O1 | H15 | 119.0° | 120.0° |
| C | C6 | O1 | H14 | 58.0° | 60.0° |
| C6 | C | O | OXT | 179.1° | 180.0° |
| C6 | C | OXT | HXT | 179.3° | 180.0° |
| O1 | C6 | C | O | 88.9° | 5.0° |
| O1 | C6 | C | OXT | 91.9° | 175.0° |
| H15 | C6 | O1 | H14 | 61.0° | 180.0° |
| H15 | C6 | C | O | 153.2° | 125.0° |
| H15 | C6 | C | OXT | 26.0° | 55.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
