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L2D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAHCALdoub1.39Å1.39ÅAromatic
CAHCAFsing1.39Å1.39ÅAromatic
CALCAZsing1.39Å1.39ÅAromatic
CAFCAJdoub1.39Å1.39ÅAromatic
CAZNAVdoub1.34Å1.34ÅAromatic
CAZCATsing1.53Å1.53Å
CAJNAVsing1.32Å1.32ÅAromatic
NAVFEsing2.20Å2.20Å
CATNBDsing1.47Å1.47Å
OXTCsing1.26Å1.26Å
OXTFEsing2.12Å2.12Å
OCdoub1.26Å1.26Å
CCAsing1.56Å1.56Å
NBDFEsing2.04Å2.04Å
NBDCBBsing1.49Å1.49Å
NBDCARsing1.48Å1.48Å
FENAUsing2.07Å2.07Å
FEOADsing2.10Å2.10Å
FENsing2.13Å2.13Å
CBBCAPsing1.53Å1.53Å
CBBCBAsing1.49Å1.49Å
CAPCANsing1.53Å1.53Å
CARCAXsing1.54Å1.54Å
CAINAUdoub1.32Å1.32ÅAromatic
CAICAEsing1.38Å1.38ÅAromatic
CANsing1.50Å1.50Å
CANCAMsing1.54Å1.54Å
NAUCAYsing1.34Å1.34ÅAromatic
OADCAXsing1.25Å1.25Å
CAXOABdoub1.25Å1.25Å
NCBAsing1.48Å1.48Å
NCASsing1.44Å1.44Å
CAECAGdoub1.39Å1.39ÅAromatic
CBACAOsing1.54Å1.54Å
CAOCAMsing1.52Å1.52Å
CAYCASsing1.53Å1.53Å
CAYCAKdoub1.38Å1.38ÅAromatic
CAGCAKsing1.38Å1.38ÅAromatic
CAKH1sing1.08Å1.08Å
CAGH2sing1.08Å1.08Å
CAEH3sing1.08Å1.08Å
CAIH4sing1.08Å1.08Å
CASH5sing1.10Å1.10Å
CASH6sing1.10Å1.10Å
CAH7sing1.10Å1.10Å
CAH8sing1.10Å1.10Å
CBAH9sing1.10Å1.10Å
CAOH10sing1.10Å1.10Å
CAOH11sing1.10Å1.10Å
CAMH12sing1.10Å1.10Å
CAMH13sing1.10Å1.10Å
CANH14sing1.10Å1.10Å
CANH15sing1.10Å1.10Å
CAPH16sing1.10Å1.10Å
CAPH17sing1.10Å1.10Å
CBBH18sing1.10Å1.10Å
CARH19sing1.10Å1.10Å
CARH20sing1.10Å1.10Å
CATH21sing1.10Å1.10Å
CATH22sing1.10Å1.10Å
CALH23sing1.08Å1.08Å
CAHH24sing1.08Å1.08Å
CAFH25sing1.08Å1.08Å
CAJH26sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CALCAHCAF119.1°119.1°
CAHCALCAZ118.6°118.6°
CAHCALH23120.7°120.7°
CALCAHH24120.5°120.5°
CAHCAFCAJ119.5°119.5°
CAFCAHH24120.4°120.4°
CAHCAFH25120.2°120.2°
CALCAZNAV120.4°120.4°
CALCAZCAT122.1°122.1°
CAZCALH23120.7°120.7°
CAFCAJNAV119.7°119.7°
CAJCAFH25120.2°120.2°
CAFCAJH26120.2°120.2°
NAVCAZCAT117.5°117.5°
CAZNAVCAJ122.6°122.6°
CAZNAVFE110.5°110.5°
CAZCATNBD105.5°105.5°
CAZCATH21110.5°110.5°
CAZCATH22110.4°110.4°
CAJNAVFE125.3°125.3°
NAVCAJH26120.1°120.1°
NAVFEOXT89.9°89.9°
NAVFENBD78.3°78.3°
NAVFENAU129.0°129.0°
NAVFEOAD87.5°87.5°
NAVFEN160.0°160.0°
CATNBDFE112.1°112.1°
CATNBDCBB111.4°111.4°
CATNBDCAR108.1°108.1°
NBDCATH21110.4°110.4°
NBDCATH22110.4°110.4°
COXTFE110.6°110.6°
OXTCO124.0°124.0°
OXTCCA118.7°118.7°
OXTFENBD89.6°89.6°
OXTFENAU99.7°99.7°
OXTFEOAD172.5°172.5°
OXTFEN84.4°84.4°
OCCA116.9°116.9°
CCAN115.0°115.0°
CCAH7108.1°108.1°
CCAH8108.1°108.1°
FENBDCBB106.3°106.3°
FENBDCAR110.8°110.8°
NBDFENAU150.6°150.6°
NBDFEOAD83.0°83.0°
NBDFEN82.5°82.5°
CBBNBDCAR108.1°108.1°
NBDCBBCAP108.4°108.4°
NBDCBBCBA107.2°107.2°
NBDCBBH18111.0°111.0°
NBDCARCAX112.2°112.2°
NBDCARH19108.8°108.8°
NBDCARH20108.8°108.8°
NAUFEOAD87.4°87.4°
NAUFEN71.0°71.0°
FENAUCAI116.8°116.8°
FENAUCAY116.0°116.0°
OADFEN95.7°95.7°
FEOADCAX113.3°113.3°
FENCA101.0°101.0°
FENCBA107.5°107.5°
FENCAS117.9°117.9°
CAPCBBCBA108.7°108.7°
CBBCAPCAN108.7°108.7°
CBBCAPH16109.7°109.7°
CBBCAPH17109.7°109.7°
CAPCBBH18110.4°110.4°
CBBCBAN107.0°107.0°
CBBCBACAO109.1°109.1°
CBBCBAH9110.3°110.3°
CBACBBH18111.0°111.0°
CAPCANCAM108.4°108.4°
CAPCANH14109.7°109.7°
CAPCANH15109.8°109.8°
CANCAPH16109.7°109.7°
CANCAPH17109.7°109.7°
CARCAXOAD118.9°118.9°
CARCAXOAB116.5°116.5°
CAXCARH19108.8°108.8°
CAXCARH20108.8°108.8°
NAUCAICAE119.3°119.3°
CAINAUCAY123.2°123.2°
NAUCAIH4120.4°120.4°
CAICAECAG119.4°119.4°
CAICAEH3120.3°120.3°
CAECAIH4120.3°120.3°
CANCBA118.3°118.3°
CANCAS105.9°105.9°
NCAH7108.1°108.1°
NCAH8108.1°108.1°
CANCAMCAO110.1°110.1°
CANCAMH12109.3°109.3°
CANCAMH13109.3°109.3°
CAMCANH14109.7°109.7°
CAMCANH15109.7°109.7°
NAUCAYCAS118.0°118.0°
NAUCAYCAK119.9°119.9°
OADCAXOAB124.6°124.6°
CBANCAS106.7°106.7°
NCBACAO110.4°110.4°
NCBAH9110.4°110.4°
NCASCAY100.3°100.3°
NCASH5111.7°111.7°
NCASH6111.7°111.7°
CAECAGCAK120.0°120.0°
CAECAGH2120.0°120.0°
CAGCAEH3120.3°120.3°
CBACAOCAM108.1°108.1°
CAOCBAH9109.6°109.6°
CBACAOH10109.8°109.8°
CBACAOH11109.8°109.8°
CAMCAOH10109.8°109.8°
CAMCAOH11109.8°109.8°
CAOCAMH12109.3°109.3°
CAOCAMH13109.3°109.3°
CASCAYCAK122.1°122.1°
CAYCASH5111.7°111.7°
CAYCASH6111.7°111.7°
CAYCAKCAG118.3°118.3°
CAYCAKH1120.9°120.9°
CAGCAKH1120.9°120.9°
CAKCAGH2120.0°120.0°
H5CASH6109.5°109.5°
H7CAH8109.5°109.5°
H10CAOH11109.5°109.5°
H12CAMH13109.4°109.4°
H14CANH15109.5°109.5°
H16CAPH17109.4°109.4°
H19CARH20109.4°109.4°
H21CATH22109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CALCAHCAFH24180.0°180.0°
CAHCALCAZH23180.0°180.0°
CALCAHCAFCAJ0.2°0.2°
CAHCALCAZNAV1.2°1.2°
CAHCALCAZCAT179.9°179.9°
CALCAHCAFH25179.7°179.7°
CAFCAHCALCAZ1.0°1.0°
CAHCAFCAJH25180.0°180.0°
CAHCAFCAJNAV0.4°0.4°
CAFCAHCALH23179.0°179.0°
CAHCAFCAJH26179.6°179.6°
CALCAZNAVCAT178.7°178.7°
CALCAZNAVCAJ0.7°0.7°
CALCAZNAVFE167.0°167.0°
CALCAZCATNBD143.9°143.9°
CALCAZCATH2124.6°24.6°
CALCAZCATH2296.7°96.7°
CAZCALCAHH24179.0°179.0°
CAFCAJNAVCAZ0.2°0.2°
CAFCAJNAVH26180.0°180.0°
CAFCAJNAVFE164.2°164.2°
CAJCAFCAHH24179.7°179.7°
CAZNAVCAJFE164.3°164.3°
NAVCAZCATNBD37.4°37.4°
CAZNAVFEOXT81.4°81.4°
CAZNAVFENBD8.3°8.3°
CAZNAVFENAU176.2°176.2°
CAZNAVFEOAD91.6°91.6°
CAZNAVFEN8.1°8.1°
NAVCAZCATH21156.8°156.8°
NAVCAZCATH2281.9°81.9°
NAVCAZCALH23178.8°178.8°
CAZNAVCAJH26179.8°179.8°
CATCAZNAVCAJ179.3°179.3°
CATCAZNAVFE14.3°14.3°
CAZCATNBDH21119.4°119.4°
CAZCATNBDH22119.4°119.4°
CAZCATNBDFE43.2°43.2°
CAZCATNBDCBB162.2°162.2°
CAZCATNBDCAR79.2°79.2°
CAZCATH21H22121.8°121.8°
CATCAZCALH230.2°0.2°
CAJNAVFEOXT112.7°112.7°
CAJNAVFENBD157.7°157.7°
CAJNAVFENAU10.3°10.3°
CAJNAVFEOAD74.3°74.3°
CAJNAVFEN174.1°174.1°
NAVCAJCAFH25179.7°179.7°
NAVFENBDCAT29.5°29.5°
NAVFEOXTC178.2°178.2°
NAVFEOXTNBD78.3°78.3°
NAVFEOXTNAU129.7°129.7°
NAVFEOXTOAD70.0°70.0°
NAVFEOXTN160.8°160.8°
NAVFENBDNAU160.6°160.6°
NAVFENBDOAD88.9°88.9°
NAVFENBDN174.4°174.4°
NAVFENBDCBB151.5°151.5°
NAVFENBDCAR91.4°91.4°
NAVFENAUOAD84.7°84.7°
NAVFENAUN178.4°178.4°
NAVFEOADN160.2°160.2°
NAVFENAUCAI7.7°7.7°
NAVFENCA100.5°100.5°
NAVFENAUCAY150.3°150.3°
NAVFEOADCAX71.9°71.9°
NAVFENCBA24.2°24.2°
NAVFENCAS144.7°144.7°
FENAVCAJH2615.8°15.8°
CATNBDFEOXT60.5°60.5°
CATNBDFECBB122.0°122.0°
CATNBDFECAR120.8°120.8°
CATNBDCBBCAR118.6°118.6°
CATNBDFENAU169.9°169.9°
CATNBDFEOAD118.4°118.4°
CATNBDFEN144.9°144.9°
CATNBDCBBCAP69.5°69.5°
CATNBDCBBCBA173.3°173.3°
CATNBDCARCAX113.7°113.7°
CATNBDCBBH1851.9°51.9°
CATNBDCARH196.8°6.8°
CATNBDCARH20125.9°125.9°
NBDCATH21H22121.8°121.8°
OXTCOCA172.5°172.5°
COXTFENBD99.9°99.9°
COXTFENAU52.1°52.1°
COXTFEOAD108.2°108.2°
COXTFEN17.5°17.5°
OXTCCAN22.6°22.6°
OXTCCAH7143.5°143.5°
OXTCCAH898.2°98.2°
FEOXTCO169.8°169.8°
FEOXTCCA2.6°2.6°
OXTFENBDNAU109.4°109.4°
OXTFENBDOAD178.9°178.9°
OXTFENBDN84.4°84.4°
OXTFENBDCBB61.5°61.5°
OXTFENBDCAR178.6°178.6°
OXTFENAUOAD177.5°177.5°
OXTFENAUN80.6°80.6°
OXTFEOADN90.0°90.0°
OXTFENAUCAI90.1°90.1°
OXTFENCA26.3°26.3°
OXTFENAUCAY111.8°111.8°
OXTFEOADCAX1.8°1.8°
OXTFENCBA98.4°98.4°
OXTFENCAS141.1°141.1°
OCCAN164.5°164.5°
OCCAH743.6°43.6°
OCCAH874.7°74.7°
CCANFE32.7°32.7°
CCANH7120.8°120.8°
CCANH8120.8°120.8°
CCANCBA84.3°84.3°
CCANCAS156.1°156.1°
CCAH7H8117.5°117.5°
FENBDCBBCAR119.0°119.0°
NBDFENAUOAD70.6°70.6°
NBDFENAUN26.3°26.3°
NBDFEOADN81.7°81.7°
FENBDCBBCAP168.1°168.1°
FENBDCBBCBA50.9°50.9°
FENBDCARCAX9.5°9.5°
NBDFENAUCAI163.0°163.0°
NBDFENCA116.7°116.7°
NBDFENAUCAY5.0°5.0°
NBDFEOADCAX6.6°6.6°
NBDFENCBA8.0°8.0°
NBDFENCAS128.6°128.6°
FENBDCBBH1870.5°70.5°
FENBDCARH19129.9°129.9°
FENBDCARH20110.9°110.9°
FENBDCATH21162.6°162.6°
FENBDCATH2276.1°76.1°
CBBNBDFENAU47.9°47.9°
CBBNBDFEOAD119.6°119.6°
CBBNBDFEN22.9°22.9°
NBDCBBCAPCBA116.3°116.3°
NBDCBBCAPH18121.8°121.8°
NBDCBBCBAH18121.4°121.4°
NBDCBBCAPCAN179.5°179.5°
CBBNBDCARCAX125.6°125.6°
NBDCBBCBAN59.4°59.4°
NBDCBBCBACAO178.8°178.8°
NBDCBBCBAH960.8°60.8°
NBDCBBCAPH1659.5°59.5°
NBDCBBCAPH1760.7°60.7°
CBBNBDCARH19114.0°114.0°
CBBNBDCARH205.2°5.2°
CBBNBDCATH2178.4°78.4°
CBBNBDCATH2242.9°42.9°
CARNBDFENAU69.3°69.3°
CARNBDFEOAD2.5°2.5°
CARNBDFEN94.2°94.2°
CARNBDCBBCAP49.1°49.1°
CARNBDCBBCBA68.1°68.1°
NBDCARCAXH19120.4°120.4°
NBDCARCAXH20120.4°120.4°
NBDCARCAXOAD16.4°16.4°
NBDCARCAXOAB165.7°165.7°
CARNBDCBBH18170.6°170.6°
NBDCARH19H20118.8°118.8°
CARNBDCATH2140.2°40.2°
CARNBDCATH22161.5°161.5°
NAUFEOADN70.6°70.6°
FENAUCAICAY156.4°156.4°
FENAUCAICAE156.0°156.0°
NAUFENCA76.0°76.0°
NAUFEOADCAX158.8°158.8°
NAUFENCBA159.3°159.3°
NAUFENCAS38.8°38.8°
FENAUCAYCAS22.7°22.7°
FENAUCAYCAK155.2°155.2°
FENAUCAIH423.9°23.9°
FEOADCAXCAR14.2°14.2°
OADFENAUCAI92.4°92.4°
OADFENCA161.2°161.2°
OADFENAUCAY65.7°65.7°
FEOADCAXOAB168.1°168.1°
OADFENCBA74.1°74.1°
OADFENCAS46.5°46.5°
FENCBACBB37.5°37.5°
NFENAUCAI170.7°170.7°
FENCACBA117.0°117.0°
FENCACAS123.4°123.4°
NFENAUCAY31.2°31.2°
NFEOADCAX88.2°88.2°
FENCBACAS127.3°127.3°
FENCBACAO156.1°156.1°
FENCASCAY35.5°35.5°
FENCASH583.0°83.0°
FENCASH6154.0°154.0°
FENCAH7153.5°153.5°
FENCAH888.1°88.1°
FENCBAH982.6°82.6°
CAPCBBCBAH18121.6°121.6°
CBBCAPCANH16119.9°119.9°
CBBCAPCANH17119.9°119.9°
CBBCAPCANCAM59.9°59.9°
CAPCBBCBAN176.4°176.4°
CAPCBBCBACAO64.1°64.1°
CAPCBBCBAH956.3°56.3°
CBBCAPCANH14179.7°179.7°
CBBCAPCANH1559.9°59.9°
CBBCAPH16H17120.3°120.3°
CBACBBCAPCAN63.2°63.2°
CBBCBANCA76.0°76.0°
CBBCBANCAO118.6°118.6°
CBBCBANH9120.0°120.0°
CBBCBANCAS164.8°164.8°
CBBCBACAOH9120.8°120.8°
CBBCBACAOCAM62.3°62.3°
CBBCBACAOH1057.5°57.5°
CBBCBACAOH11177.9°177.9°
CBACBBCAPH1656.7°56.7°
CBACBBCAPH17176.9°176.9°
CAPCANCAMH14119.8°119.8°
CAPCANCAMH15119.9°119.9°
CAPCANCAMCAO59.4°59.4°
CAPCANCAMH1260.7°60.7°
CAPCANCAMH13179.5°179.5°
CAPCANH14H15120.5°120.5°
CANCAPH16H17120.3°120.3°
CANCAPCBBH1858.7°58.7°
CARCAXOADOAB177.7°177.7°
CAXCARH19H20118.8°118.8°
NAUCAICAEH4180.0°180.0°
NAUCAICAECAG0.3°0.3°
CAINAUCAYCAS179.2°179.2°
CAINAUCAYCAK1.4°1.4°
NAUCAICAEH3179.6°179.6°
CAECAINAUCAY0.3°0.3°
CAICAECAGH3180.0°180.0°
CAICAECAGCAK0.1°0.1°
CAICAECAGH2179.9°179.9°
CANCBACAS119.2°119.2°
CANCBACAO42.6°42.6°
CANCASCAY76.6°76.6°
CANCASH5165.0°165.0°
CANCASH641.9°41.9°
NCAH7H8117.4°117.4°
CANCBAH9163.9°163.9°
CANCAMCAOCBA59.8°59.8°
CANCAMCAOH12120.1°120.1°
CANCAMCAOH13120.1°120.1°
CANCAMCAOH1060.0°60.0°
CANCAMCAOH11179.5°179.5°
CANCAMH12H13119.7°119.7°
CAMCANH14H15120.5°120.5°
CAMCANCAPH1660.0°60.0°
CAMCANCAPH17179.8°179.8°
NAUCAYCASN7.9°7.9°
NAUCAYCASCAK177.8°177.8°
NAUCAYCAKCAG1.7°1.7°
NAUCAYCAKH1178.3°178.3°
CAYNAUCAIH4179.7°179.7°
NAUCAYCASH5110.7°110.7°
NAUCAYCASH6126.3°126.3°
OADCAXCARH19136.8°136.8°
OADCAXCARH20104.0°104.0°
OABCAXCARH1945.3°45.3°
OABCAXCARH2073.9°73.9°
NCBACAOH9121.8°121.8°
NCBACAOCAM179.7°179.7°
CBANCASCAY156.5°156.5°
CBANCASH538.0°38.0°
CBANCASH685.0°85.0°
CBANCAH736.5°36.5°
CBANCAH8154.8°154.8°
NCBACAOH1059.9°59.9°
NCBACAOH1160.5°60.5°
NCBACBBH1862.0°62.0°
CASNCBACAO76.5°76.5°
NCASCAYH5118.5°118.5°
NCASCAYH6118.5°118.5°
NCASCAYCAK174.3°174.3°
NCASH5H6124.3°124.3°
CASNCAH783.1°83.1°
CASNCAH835.3°35.3°
CASNCBAH944.8°44.8°
CAECAGCAKCAY1.1°1.1°
CAECAGCAKH2180.0°180.0°
CAECAGCAKH1178.9°178.9°
CAGCAECAIH4179.7°179.7°
CBACAOCAMH10119.8°119.8°
CBACAOCAMH11119.8°119.8°
CBACAOH10H11120.6°120.6°
CBACAOCAMH1260.3°60.3°
CBACAOCAMH13179.9°179.9°
CAOCBACBBH1857.4°57.4°
CAMCAOCBAH958.5°58.5°
CAMCAOH10H11120.7°120.7°
CAOCAMH12H13119.7°119.7°
CAOCAMCANH14179.2°179.2°
CAOCAMCANH1560.5°60.5°
CASCAYCAKCAG179.5°179.5°
CASCAYCAKH10.5°0.5°
CAYCASH5H6124.3°124.3°
CAYCAKCAGH1180.0°180.0°
CAYCAKCAGH2178.9°178.9°
CAKCAYCASH567.2°67.2°
CAKCAYCASH655.8°55.8°
CAKCAGCAEH3179.9°179.9°
H1CAKCAGH21.1°1.1°
H2CAGCAEH30.1°0.1°
H3CAECAIH40.4°0.4°
H9CBACAOH10178.3°178.3°
H9CBACAOH1161.3°61.3°
H9CBACBBH18177.8°177.8°
H10CAOCAMH12179.9°179.9°
H10CAOCAMH1360.1°60.1°
H11CAOCAMH1259.4°59.4°
H11CAOCAMH1360.3°60.3°
H12CAMCANH1459.1°59.1°
H12CAMCANH15179.4°179.4°
H13CAMCANH1460.7°60.7°
H13CAMCANH1559.6°59.6°
H14CANCAPH1659.8°59.8°
H14CANCAPH1760.4°60.4°
H15CANCAPH16179.9°179.9°
H15CANCAPH1759.9°59.9°
H16CAPCBBH18178.6°178.6°
H17CAPCBBH1861.2°61.2°
H23CALCAHH241.0°1.0°
H24CAHCAFH250.3°0.3°
H25CAFCAJH260.3°0.3°

222415

PDB entries from 2024-07-10

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