Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

L2D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAHCALdoub1.38Å1.39ÅAromatic
CAHCAFsing1.37Å1.39ÅAromatic
CALCAZsing1.39Å1.39ÅAromatic
CAFCAJdoub1.37Å1.39ÅAromatic
CAZNAVdoub1.34Å1.34ÅAromatic
CAZCATsing1.51Å1.53Å
CAJNAVsing1.34Å1.32ÅAromatic
NAVFEsing2.09Å2.20Å
CATNBDsing1.51Å1.47Å
OXTCsing1.25Å1.26Å
OXTFEsing1.96Å2.12Å
OCdoub1.25Å1.26Å
CCAsing1.52Å1.56Å
NBDFEsing2.15Å2.04Å
NBDCBBsing1.57Å1.49Å
NBDCARsing1.50Å1.48Å
FENAUsing2.07Å2.07Å
FEOADsing1.94Å2.10Å
FENsing2.13Å2.13Å
CBBCAPsing1.54Å1.53Å
CBBCBAsing1.56Å1.49Å
CAPCANsing1.53Å1.53Å
CARCAXsing1.51Å1.54Å
CAINAUdoub1.34Å1.32ÅAromatic
CAICAEsing1.37Å1.38ÅAromatic
CANsing1.50Å1.50Å
CANCAMsing1.52Å1.54Å
NAUCAYsing1.34Å1.34ÅAromatic
OADCAXsing1.24Å1.25Å
CAXOABdoub1.25Å1.25Å
NCBAsing1.57Å1.48Å
NCASsing1.51Å1.44Å
CAECAGdoub1.37Å1.39ÅAromatic
CBACAOsing1.54Å1.54Å
CAOCAMsing1.53Å1.52Å
CAYCASsing1.51Å1.53Å
CAYCAKdoub1.39Å1.38ÅAromatic
CAGCAKsing1.38Å1.38ÅAromatic
CAKH1sing0.93Å1.08Å
CAGH2sing0.94Å1.08Å
CAEH3sing0.94Å1.08Å
CAIH4sing0.94Å1.08Å
CASH5sing0.99Å1.10Å
CASH6sing0.99Å1.10Å
CAH7sing0.98Å1.10Å
CAH8sing0.98Å1.10Å
CBAH9sing1.00Å1.10Å
CAOH10sing0.98Å1.10Å
CAOH11sing0.98Å1.10Å
CAMH12sing0.98Å1.10Å
CAMH13sing0.98Å1.10Å
CANH14sing0.98Å1.10Å
CANH15sing0.98Å1.10Å
CAPH16sing0.98Å1.10Å
CAPH17sing0.98Å1.10Å
CBBH18sing1.00Å1.10Å
CARH19sing0.98Å1.10Å
CARH20sing0.98Å1.10Å
CATH21sing0.99Å1.10Å
CATH22sing0.99Å1.10Å
CALH23sing0.93Å1.08Å
CAHH24sing0.94Å1.08Å
CAFH25sing0.94Å1.08Å
CAJH26sing0.94Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CALCAHCAF119.1°119.2°
CAHCALCAZ118.6°119.1°
CAHCALH23120.7°120.6°
CALCAHH24120.5°120.4°
CAHCAFCAJ119.5°118.5°
CAFCAHH24120.4°120.4°
CAHCAFH25120.2°120.8°
CALCAZNAV120.4°122.0°
CALCAZCAT122.1°121.5°
CAZCALH23120.7°120.3°
CAFCAJNAV119.7°123.4°
CAJCAFH25120.2°120.7°
CAFCAJH26120.2°118.4°
NAVCAZCAT117.5°116.5°
CAZNAVCAJ122.6°117.8°
CAZNAVFE110.5°110.7°
CAZCATNBD105.5°114.1°
CAZCATH21110.5°108.0°
CAZCATH22110.4°109.1°
CAJNAVFE125.3°130.2°
NAVCAJH26120.1°118.1°
NAVFEOXT89.9°82.1°
NAVFENBD78.3°81.3°
NAVFENAU129.0°111.1°
NAVFEOAD87.5°94.3°
NAVFEN160.0°163.7°
CATNBDFE112.1°100.5°
CATNBDCBB111.4°115.6°
CATNBDCAR108.1°112.9°
NBDCATH21110.4°109.5°
NBDCATH22110.4°109.0°
COXTFE110.6°113.3°
OXTCO124.0°125.7°
OXTCCA118.7°116.7°
OXTFENBD89.6°98.7°
OXTFENAU99.7°94.1°
OXTFEOAD172.5°174.2°
OXTFEN84.4°86.7°
OCCA116.9°117.6°
CCAN115.0°113.8°
CCAH7108.1°106.1°
CCAH8108.1°108.7°
FENBDCBB106.3°104.9°
FENBDCAR110.8°100.5°
NBDFENAU150.6°163.4°
NBDFEOAD83.0°85.2°
NBDFEN82.5°88.8°
CBBNBDCAR108.1°118.8°
NBDCBBCAP108.4°115.7°
NBDCBBCBA107.2°111.9°
NBDCBBH18111.0°105.6°
NBDCARCAX112.2°113.6°
NBDCARH19108.8°110.4°
NBDCARH20108.8°110.3°
NAUFEOAD87.4°83.0°
NAUFEN71.0°81.3°
FENAUCAI116.8°129.3°
FENAUCAY116.0°110.5°
OADFEN95.7°97.8°
FEOADCAX113.3°107.7°
FENCA101.0°99.7°
FENCBA107.5°104.9°
FENCAS117.9°101.3°
CAPCBBCBA108.7°112.2°
CBBCAPCAN108.7°113.4°
CBBCAPH16109.7°108.9°
CBBCAPH17109.7°109.6°
CAPCBBH18110.4°105.1°
CBBCBAN107.0°112.6°
CBBCBACAO109.1°111.8°
CBBCBAH9110.3°105.1°
CBACBBH18111.0°105.2°
CAPCANCAM108.4°111.3°
CAPCANH14109.7°109.4°
CAPCANH15109.8°109.2°
CANCAPH16109.7°108.9°
CANCAPH17109.7°108.4°
CARCAXOAD118.9°115.9°
CARCAXOAB116.5°118.2°
CAXCARH19108.8°105.4°
CAXCARH20108.8°109.3°
NAUCAICAE119.3°123.5°
CAINAUCAY123.2°117.7°
NAUCAIH4120.4°118.1°
CAICAECAG119.4°118.5°
CAICAEH3120.3°120.7°
CAECAIH4120.3°118.5°
CANCBA118.3°119.5°
CANCAS105.9°112.2°
NCAH7108.1°110.3°
NCAH8108.1°110.3°
CANCAMCAO110.1°111.3°
CANCAMH12109.3°109.2°
CANCAMH13109.3°109.6°
CAMCANH14109.7°109.6°
CAMCANH15109.7°109.3°
NAUCAYCAS118.0°116.4°
NAUCAYCAK119.9°122.1°
OADCAXOAB124.6°125.9°
CBANCAS106.7°115.6°
NCBACAO110.4°115.6°
NCBAH9110.4°105.5°
NCASCAY100.3°113.8°
NCASH5111.7°108.9°
NCASH6111.7°109.7°
CAECAGCAK120.0°119.2°
CAECAGH2120.0°120.5°
CAGCAEH3120.3°120.8°
CBACAOCAM108.1°113.4°
CAOCBAH9109.6°105.1°
CBACAOH10109.8°108.9°
CBACAOH11109.8°109.5°
CAMCAOH10109.8°108.9°
CAMCAOH11109.8°108.4°
CAOCAMH12109.3°109.2°
CAOCAMH13109.3°109.5°
CASCAYCAK122.1°121.6°
CAYCASH5111.7°109.0°
CAYCASH6111.7°108.1°
CAYCAKCAG118.3°119.0°
CAYCAKH1120.9°120.3°
CAGCAKH1120.9°120.7°
CAKCAGH2120.0°120.3°
H5CASH6109.5°107.1°
H7CAH8109.5°107.3°
H10CAOH11109.5°107.5°
H12CAMH13109.4°107.9°
H14CANH15109.5°108.0°
H16CAPH17109.4°107.5°
H19CARH20109.4°107.7°
H21CATH22109.5°107.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CALCAHCAFH24180.0°179.9°
CAHCALCAZH23180.0°179.6°
CALCAHCAFCAJ0.2°0.1°
CAHCALCAZNAV1.2°1.1°
CAHCALCAZCAT179.9°179.8°
CALCAHCAFH25179.7°180.0°
CAFCAHCALCAZ1.0°0.3°
CAHCAFCAJH25180.0°180.0°
CAHCAFCAJNAV0.4°0.6°
CAFCAHCALH23179.0°179.9°
CAHCAFCAJH26179.6°180.0°
CALCAZNAVCAT178.7°178.7°
CALCAZNAVCAJ0.7°1.6°
CALCAZNAVFE167.0°166.5°
CALCAZCATNBD143.9°161.0°
CALCAZCATH2124.6°77.1°
CALCAZCATH2296.7°38.9°
CAZCALCAHH24179.0°179.6°
CAFCAJNAVCAZ0.2°1.4°
CAFCAJNAVH26180.0°179.4°
CAFCAJNAVFE164.2°164.0°
CAJCAFCAHH24179.7°179.9°
CAZNAVCAJFE164.3°165.4°
NAVCAZCATNBD37.4°20.3°
CAZNAVFEOXT81.4°72.3°
CAZNAVFENBD8.3°27.8°
CAZNAVFENAU176.2°163.7°
CAZNAVFEOAD91.6°112.2°
CAZNAVFEN8.1°25.4°
NAVCAZCATH21156.8°101.6°
NAVCAZCATH2281.9°142.4°
NAVCAZCALH23178.8°179.3°
CAZNAVCAJH26179.8°179.2°
CATCAZNAVCAJ179.3°179.7°
CATCAZNAVFE14.3°12.2°
CAZCATNBDH21119.4°121.1°
CAZCATNBDH22119.4°122.2°
CAZCATNBDFE43.2°39.0°
CAZCATNBDCBB162.2°151.3°
CAZCATNBDCAR79.2°67.2°
CAZCATH21H22121.8°117.3°
CATCAZCALH230.2°0.7°
CAJNAVFEOXT112.7°93.9°
CAJNAVFENBD157.7°166.0°
CAJNAVFENAU10.3°2.6°
CAJNAVFEOAD74.3°81.5°
CAJNAVFEN174.1°140.8°
NAVCAJCAFH25179.7°179.4°
NAVFENBDCAT29.5°34.7°
NAVFEOXTC178.2°164.2°
NAVFEOXTNBD78.3°79.9°
NAVFEOXTNAU129.7°110.8°
NAVFEOXTOAD70.0°51.5°
NAVFEOXTN160.8°168.2°
NAVFENBDNAU160.6°139.9°
NAVFENBDOAD88.9°95.1°
NAVFENBDN174.4°167.0°
NAVFENBDCBB151.5°155.0°
NAVFENBDCAR91.4°81.2°
NAVFENAUOAD84.7°91.9°
NAVFENAUN178.4°169.1°
NAVFEOADN160.2°169.0°
NAVFENAUCAI7.7°0.8°
NAVFENCA100.5°60.5°
NAVFENAUCAY150.3°160.7°
NAVFEOADCAX71.9°46.9°
NAVFENCBA24.2°63.7°
NAVFENCAS144.7°175.7°
FENAVCAJH2615.8°15.4°
CATNBDFEOXT60.5°45.9°
CATNBDFECBB122.0°120.3°
CATNBDFECAR120.8°115.9°
CATNBDCBBCAR118.6°139.1°
CATNBDFENAU169.9°174.5°
CATNBDFEOAD118.4°129.7°
CATNBDFEN144.9°132.3°
CATNBDCBBCAP69.5°85.7°
CATNBDCBBCBA173.3°144.0°
CATNBDCARCAX113.7°101.8°
CATNBDCBBH1851.9°30.1°
CATNBDCARH196.8°140.1°
CATNBDCARH20125.9°21.2°
NBDCATH21H22121.8°118.0°
OXTCOCA172.5°180.0°
COXTFENBD99.9°84.3°
COXTFENAU52.1°85.0°
COXTFEOAD108.2°144.3°
COXTFEN17.5°4.0°
OXTCCAN22.6°37.3°
OXTCCAH7143.5°84.2°
OXTCCAH898.2°160.7°
FEOXTCO169.8°157.5°
FEOXTCCA2.6°22.5°
OXTFENBDNAU109.4°139.5°
OXTFENBDOAD178.9°175.6°
OXTFENBDN84.4°86.4°
OXTFENBDCBB61.5°74.4°
OXTFENBDCAR178.6°161.8°
OXTFENAUOAD177.5°175.0°
OXTFENAUN80.6°86.0°
OXTFEOADN90.0°140.0°
OXTFENAUCAI90.1°82.3°
OXTFENCA26.3°14.1°
OXTFENAUCAY111.8°116.2°
OXTFEOADCAX1.8°98.0°
OXTFENCBA98.4°110.1°
OXTFENCAS141.1°129.3°
OCCAN164.5°142.7°
OCCAH743.6°95.8°
OCCAH874.7°19.4°
CCANFE32.7°28.3°
CCANH7120.8°119.1°
CCANH8120.8°122.5°
CCANCBA84.3°85.1°
CCANCAS156.1°134.9°
CCAH7H8117.5°116.1°
FENBDCBBCAR119.0°111.2°
NBDFENAUOAD70.6°45.0°
NBDFENAUN26.3°54.0°
NBDFEOADN81.7°88.1°
FENBDCBBCAP168.1°164.5°
FENBDCBBCBA50.9°34.3°
FENBDCARCAX9.5°4.5°
NBDFENAUCAI163.0°137.7°
NBDFENCA116.7°112.9°
NBDFENAUCAY5.0°23.8°
NBDFEOADCAX6.6°34.0°
NBDFENCBA8.0°11.3°
NBDFENCAS128.6°132.0°
FENBDCBBH1870.5°79.6°
FENBDCARH19129.9°113.6°
FENBDCARH20110.9°127.5°
FENBDCATH21162.6°82.1°
FENBDCATH2276.1°161.2°
CBBNBDFENAU47.9°65.2°
CBBNBDFEOAD119.6°110.0°
CBBNBDFEN22.9°12.0°
NBDCBBCAPCBA116.3°130.1°
NBDCBBCAPH18121.8°116.1°
NBDCBBCBAH18121.4°114.2°
NBDCBBCAPCAN179.5°179.3°
CBBNBDCARCAX125.6°118.1°
NBDCBBCBAN59.4°47.9°
NBDCBBCBACAO178.8°180.0°
NBDCBBCBAH960.8°66.5°
NBDCBBCAPH1659.5°57.9°
NBDCBBCAPH1760.7°59.4°
CBBNBDCARH19114.0°0.0°
CBBNBDCARH205.2°118.9°
CBBNBDCATH2178.4°30.2°
CBBNBDCATH2242.9°86.5°
CARNBDFENAU69.3°58.7°
CARNBDFEOAD2.5°13.8°
CARNBDFEN94.2°111.8°
CARNBDCBBCAP49.1°53.3°
CARNBDCBBCBA68.1°76.9°
NBDCARCAXH19120.4°121.0°
NBDCARCAXH20120.4°123.6°
NBDCARCAXOAD16.4°35.1°
NBDCARCAXOAB165.7°145.0°
CARNBDCBBH18170.6°169.1°
NBDCARH19H20118.8°120.5°
CARNBDCATH2140.2°171.7°
CARNBDCATH22161.5°54.9°
NAUFEOADN70.6°80.2°
FENAUCAICAY156.4°160.4°
FENAUCAICAE156.0°159.1°
NAUFENCA76.0°80.5°
NAUFEOADCAX158.8°157.7°
NAUFENCBA159.3°155.3°
NAUFENCAS38.8°34.7°
FENAUCAYCAS22.7°16.7°
FENAUCAYCAK155.2°162.7°
FENAUCAIH423.9°20.1°
FEOADCAXCAR14.2°46.6°
OADFENAUCAI92.4°92.7°
OADFENCA161.2°162.2°
OADFENAUCAY65.7°68.8°
FEOADCAXOAB168.1°133.5°
OADFENCBA74.1°73.6°
OADFENCAS46.5°47.0°
FENCBACBB37.5°34.0°
NFENAUCAI170.7°168.3°
FENCACBA117.0°113.4°
FENCACAS123.4°106.6°
NFENAUCAY31.2°30.2°
NFEOADCAX88.2°122.1°
FENCBACAS127.3°110.7°
FENCBACAO156.1°164.2°
FENCASCAY35.5°36.3°
FENCASH583.0°158.2°
FENCASH6154.0°85.0°
FENCAH7153.5°90.8°
FENCAH888.1°150.9°
FENCBAH982.6°80.1°
CAPCBBCBAH18121.6°113.8°
CBBCAPCANH16119.9°121.4°
CBBCAPCANH17119.9°121.9°
CBBCAPCANCAM59.9°54.3°
CAPCBBCBAN176.4°179.9°
CAPCBBCBACAO64.1°48.0°
CAPCBBCBAH956.3°65.5°
CBBCAPCANH14179.7°67.0°
CBBCAPCANH1559.9°175.1°
CBBCAPH16H17120.3°118.6°
CBACBBCAPCAN63.2°50.5°
CBBCBANCA76.0°76.5°
CBBCBANCAO118.6°130.2°
CBBCBANH9120.0°114.1°
CBBCBANCAS164.8°144.7°
CBBCBACAOH9120.8°113.5°
CBBCBACAOCAM62.3°50.9°
CBBCBACAOH1057.5°172.4°
CBBCBACAOH11177.9°70.4°
CBACBBCAPH1656.7°172.0°
CBACBBCAPH17176.9°70.7°
CAPCANCAMH14119.8°121.2°
CAPCANCAMH15119.9°120.7°
CAPCANCAMCAO59.4°55.5°
CAPCANCAMH1260.7°176.2°
CAPCANCAMH13179.5°65.8°
CAPCANH14H15120.5°118.7°
CANCAPH16H17120.3°117.2°
CANCAPCBBH1858.7°63.3°
CARCAXOADOAB177.7°179.9°
CAXCARH19H20118.8°116.5°
NAUCAICAEH4180.0°179.3°
NAUCAICAECAG0.3°0.7°
CAINAUCAYCAS179.2°179.4°
CAINAUCAYCAK1.4°1.2°
NAUCAICAEH3179.6°179.4°
CAECAINAUCAY0.3°1.2°
CAICAECAGH3180.0°179.9°
CAICAECAGCAK0.1°0.1°
CAICAECAGH2179.9°179.8°
CANCBACAS119.2°138.8°
CANCBACAO42.6°53.7°
CANCASCAY76.6°69.1°
CANCASH5165.0°52.7°
CANCASH641.9°169.6°
NCAH7H8117.4°120.2°
CANCBAH9163.9°169.4°
CANCAMCAOCBA59.8°54.9°
CANCAMCAOH12120.1°120.7°
CANCAMCAOH13120.1°121.4°
CANCAMCAOH1060.0°176.3°
CANCAMCAOH11179.5°67.0°
CANCAMH12H13119.7°119.1°
CAMCANH14H15120.5°119.0°
CAMCANCAPH1660.0°175.7°
CAMCANCAPH17179.8°67.7°
NAUCAYCASN7.9°15.1°
NAUCAYCASCAK177.8°179.5°
NAUCAYCAKCAG1.7°0.6°
NAUCAYCAKH1178.3°179.5°
CAYNAUCAIH4179.7°179.5°
NAUCAYCASH5110.7°136.9°
NAUCAYCASH6126.3°107.1°
OADCAXCARH19136.8°85.9°
OADCAXCARH20104.0°158.6°
OABCAXCARH1945.3°94.0°
OABCAXCARH2073.9°21.4°
NCBACAOH9121.8°115.9°
NCBACAOCAM179.7°178.6°
CBANCASCAY156.5°149.1°
CBANCASH538.0°89.0°
CBANCASH685.0°27.8°
CBANCAH736.5°155.8°
CBANCAH8154.8°37.5°
NCBACAOH1059.9°57.1°
NCBACAOH1160.5°60.2°
NCBACBBH1862.0°66.3°
CASNCBACAO76.5°85.1°
NCASCAYH5118.5°121.8°
NCASCAYH6118.5°122.2°
NCASCAYCAK174.3°165.5°
NCASH5H6124.3°118.5°
CASNCAH783.1°15.8°
CASNCAH835.3°102.6°
CASNCBAH944.8°30.6°
CAECAGCAKCAY1.1°0.1°
CAECAGCAKH2180.0°180.0°
CAECAGCAKH1178.9°180.0°
CAGCAECAIH4179.7°180.0°
CBACAOCAMH10119.8°121.4°
CBACAOCAMH11119.8°121.9°
CBACAOH10H11120.6°118.5°
CBACAOCAMH1260.3°175.6°
CBACAOCAMH13179.9°66.5°
CAOCBACBBH1857.4°65.8°
CAMCAOCBAH958.5°62.7°
CAMCAOH10H11120.7°117.3°
CAOCAMH12H13119.7°118.9°
CAOCAMCANH14179.2°65.7°
CAOCAMCANH1560.5°176.2°
CASCAYCAKCAG179.5°180.0°
CASCAYCAKH10.5°0.1°
CAYCASH5H6124.3°116.7°
CAYCAKCAGH1180.0°179.9°
CAYCAKCAGH2178.9°179.9°
CAKCAYCASH567.2°43.7°
CAKCAYCASH655.8°72.4°
CAKCAGCAEH3179.9°180.0°
H1CAKCAGH21.1°0.0°
H2CAGCAEH30.1°0.0°
H3CAECAIH40.4°0.1°
H9CBACAOH10178.3°58.8°
H9CBACAOH1161.3°176.1°
H9CBACBBH18177.8°179.3°
H10CAOCAMH12179.9°63.0°
H10CAOCAMH1360.1°54.9°
H11CAOCAMH1259.4°53.7°
H11CAOCAMH1360.3°171.6°
H12CAMCANH1459.1°55.0°
H12CAMCANH15179.4°63.1°
H13CAMCANH1460.7°173.0°
H13CAMCANH1559.6°54.9°
H14CANCAPH1659.8°54.4°
H14CANCAPH1760.4°171.1°
H15CANCAPH16179.9°63.5°
H15CANCAPH1759.9°53.1°
H16CAPCBBH18178.6°58.2°
H17CAPCBBH1861.2°175.5°
H23CALCAHH241.0°0.1°
H24CAHCAFH250.3°0.1°
H25CAFCAJH260.3°0.0°

258735

PDB entries from 2026-08-26

PDB statisticsPDBj update infoContact PDBjnumon