Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

Obsolete: L1L

L1L was replaced with GP1 on
Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O9Psing1.61Å1.51Å
PO2doub1.48Å1.50Å
PO8sing1.61Å1.51Å
PO1sing1.61Å1.49Å
O6C6sing1.43Å1.44Å
C6C5sing1.53Å1.51Å
C5O5sing1.43Å1.43Å
C5C4sing1.53Å1.52Å
O5C1sing1.43Å1.43Å
C1O1sing1.43Å1.44Å
C1C2sing1.53Å1.53Å
C4O4sing1.43Å1.44Å
C4C3sing1.53Å1.51Å
C3O3sing1.43Å1.43Å
C3C2sing1.53Å1.53Å
C2N2sing1.47Å1.45Å
O9H9sing0.97Å0.95Å
O8H8sing0.97Å0.95Å
O6HO6sing0.97Å0.95Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
O4HO4sing0.97Å0.95Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
N2HN21sing1.01Å1.00Å
N2HN22sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O9PO2111.0°109.5°
O9PO8110.1°109.5°
O9PO1101.9°109.4°
PO9H9109.5°114.0°
O2PO8110.3°109.5°
O2PO1109.7°109.5°
O8PO1113.5°109.5°
PO8H8109.5°114.0°
PO1C1126.7°123.0°
O6C6C5105.9°109.5°
C6O6HO6109.5°114.0°
O6C6H61110.3°109.5°
O6C6H62110.4°109.5°
C6C5O5107.8°109.5°
C6C5C4110.0°109.5°
C5C6H61110.3°109.4°
C5C6H62110.3°109.4°
C6C5H5109.4°109.4°
O5C5C4110.0°109.4°
C5O5C1115.4°114.1°
O5C5H5110.5°109.5°
C5C4O4110.0°109.5°
C5C4C3109.8°109.1°
C4C5H5109.2°109.5°
C5C4H4108.1°109.5°
O5C1O1112.2°109.5°
O5C1C2107.8°109.4°
O5C1H1108.7°109.5°
O1C1C2112.1°109.5°
O1C1H1108.5°109.5°
C1C2C3113.0°109.2°
C1C2N2110.0°109.5°
C2C1H1107.5°109.5°
C1C2H2108.1°109.6°
O4C4C3111.3°109.5°
O4C4H4109.3°109.6°
C4O4HO4109.5°114.0°
C4C3O3107.3°109.5°
C4C3C2112.2°109.0°
C3C4H4108.3°109.6°
C4C3H3109.3°109.6°
O3C3C2108.5°109.6°
O3C3H3110.4°109.6°
C3O3HO3109.5°114.0°
C3C2N2108.6°109.5°
C3C2H2108.0°109.5°
C2C3H3109.1°109.6°
N2C2H2109.1°109.5°
C2N2HN21109.5°111.0°
C2N2HN22109.5°111.0°
H61C6H62109.5°109.5°
HN21N2HN22109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O9PO2O8122.4°120.0°
O9PO2O1111.9°120.0°
O9PO8O1113.5°119.9°
O9PO1C1146.0°175.0°
O9PO8H8122.9°60.0°
O2PO8O1123.6°120.0°
O2PO1C196.3°55.0°
O2PO9H90.0°60.0°
O2PO8H80.0°180.0°
O8PO1C127.6°65.0°
O8PO9H9122.5°60.0°
PO1C1O584.8°90.0°
PO1C1C2153.8°150.1°
O1PO9H9116.8°180.0°
O1PO8H8123.6°60.0°
PO1C1H135.3°30.0°
O6C6C5H61119.4°120.1°
O6C6C5H62119.5°120.0°
O6C6C5O562.2°65.0°
O6C6C5C457.7°175.0°
O6C6H61H62121.7°120.0°
O6C6C5H5177.7°55.0°
C6C5O5C4120.0°120.0°
C6C5O5H5119.4°120.0°
C6C5C4H5120.1°120.0°
C6C5O5C1176.9°178.8°
C6C5C4O463.8°62.5°
C6C5C4C3173.4°177.6°
C5C6O6HO6180.0°180.0°
C5C6H61H62121.6°119.9°
C6C5C4H455.5°57.7°
O5C5C4H5121.4°120.0°
C5O5C1O163.8°58.8°
C5O5C1C260.0°61.1°
O5C5C4O4177.6°177.5°
O5C5C4C354.8°57.6°
O5C5C6H61178.4°55.1°
O5C5C6H6257.3°175.0°
O5C5C4H463.1°62.3°
C5O5C1H1176.2°178.8°
C4C5O5C163.1°61.1°
C5C4O4C3121.9°119.7°
C5C4O4H4118.5°120.1°
C5C4C3H4117.8°119.9°
C5C4C3O3168.8°176.8°
C5C4C3C249.7°56.9°
C4C5C6H6161.7°64.9°
C4C5C6H62177.2°55.0°
C5C4O4HO4180.0°60.0°
C5C4C3H371.5°63.0°
O5C1O1C2121.4°119.9°
O5C1O1H1120.1°120.0°
O5C1C2H1117.0°120.0°
O5C1C2C351.6°57.6°
O5C1C2N2173.1°177.5°
C1O5C5H557.5°58.9°
O5C1C2H268.0°62.3°
O1C1C2H1119.1°120.1°
O1C1C2C372.4°62.4°
O1C1C2N249.2°57.5°
O1C1C2H2168.1°177.7°
C1C2C3C449.6°57.0°
C1C2C3O3168.0°176.8°
C1C2C3N2122.3°119.9°
C1C2C3H2119.5°120.0°
C1C2N2H2118.4°120.2°
C1C2C3H371.8°62.9°
C1C2N2HN21180.0°60.0°
C1C2N2HN2260.0°176.1°
O4C4C3H4120.1°120.2°
O4C4C3O369.2°63.3°
O4C4C3C2171.7°176.8°
O4C4C5H556.2°57.5°
O4C4C3H350.5°56.9°
C4C3O3C2121.4°119.5°
C4C3O3H3119.1°120.2°
C4C3C2H3121.3°119.9°
C4C3C2N2171.9°176.9°
C3C4C5H566.5°62.4°
C4C3C2H270.0°63.0°
C3C4O4HO458.1°179.7°
C4C3O3HO3180.0°60.0°
O3C3C2H3120.3°120.3°
O3C3C2N269.8°63.2°
O3C3C4H450.9°56.9°
O3C3C2H248.4°56.9°
C3C2N2H2117.5°120.1°
C2C3C4H468.1°62.9°
C3C2C1H1168.5°177.6°
C2C3O3HO358.6°179.6°
C3C2N2HN2155.9°179.7°
C3C2N2HN2264.1°56.4°
N2C2C1H170.0°62.5°
N2C2C3H350.5°57.0°
C2N2HN21HN22120.0°124.0°
HO6O6C6H6160.6°60.0°
HO6O6C6H6260.6°60.0°
H61C6C5H558.2°175.1°
H62C6C5H562.9°65.0°
H5C5C4H4175.5°177.7°
H4C4O4HO461.4°60.1°
H4C4C3H3170.7°177.1°
H1C1C2H249.0°57.7°
H2C2C3H3168.7°177.1°
H2C2N2HN2161.6°60.2°
H2C2N2HN22178.4°63.7°
H3C3O3HO360.9°60.2°

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon