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KYD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.49Å
C2N3doub1.30Å1.33ÅAromatic
C2C8sing1.41Å1.42ÅAromatic
N3N4sing1.40Å1.35ÅAromatic
N4C6sing1.34Å1.34ÅAromatic
C6C7sing1.51Å1.49Å
C6C8doub1.38Å1.40ÅAromatic
C8C9sing1.47Å1.47Å
C9O10sing1.35Å1.26Å
C9O11doub1.22Å1.24Å
C1H11Csing1.09Å1.10Å
C1H12Csing1.09Å1.10Å
C1H13Csing1.09Å1.10Å
N4H4sing0.97Å1.00Å
C7H71Csing1.09Å1.10Å
C7H72Csing1.09Å1.10Å
C7H73Csing1.09Å1.10Å
O10H10sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2N3120.3°126.0°
C1C2C8129.2°126.0°
C2C1H11C109.5°109.5°
C2C1H12C109.5°109.5°
C2C1H13C109.5°109.4°
N3C2C8110.4°108.0°
C2N3N4106.1°108.9°
C2C8C6104.4°107.2°
C2C8C9127.7°126.4°
N3N4C6112.0°108.5°
N3N4H4124.0°125.7°
N4C6C7121.1°126.3°
N4C6C8107.1°107.4°
C6N4H4124.0°125.8°
C7C6C8131.7°126.3°
C6C7H71C109.5°109.5°
C6C7H72C109.5°109.5°
C6C7H73C109.5°109.4°
C6C8C9127.9°126.4°
C8C9O10118.9°120.0°
C8C9O11117.1°120.0°
O10C9O11124.0°120.0°
C9O10H10109.5°117.0°
H11CC1H12C109.4°109.5°
H11CC1H13C109.5°109.5°
H12CC1H13C109.5°109.4°
H71CC7H72C109.5°109.5°
H71CC7H73C109.5°109.5°
H72CC7H73C109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2N3C8179.6°179.7°
C1C2N3N4179.9°180.0°
C1C2C8C6179.7°179.9°
C1C2C8C90.4°0.0°
C2C1H11CH12C120.0°120.0°
C2C1H11CH13C120.0°120.0°
C2C1H12CH13C120.0°119.9°
C2N3N4C60.3°0.1°
N3C2C8C60.1°0.4°
N3C2C8C9180.0°179.8°
N3C2C1H11C0.0°90.0°
N3C2C1H12C120.0°149.9°
N3C2C1H13C120.0°30.0°
C2N3N4H4179.7°180.0°
C8C2N3N40.2°0.3°
C2C8C6N40.1°0.3°
C2C8C6C7179.9°179.9°
C2C8C6C9179.9°179.9°
C2C8C9O1014.1°89.9°
C2C8C9O11166.1°90.1°
C8C2C1H11C179.5°90.3°
C8C2C1H12C59.5°29.8°
C8C2C1H13C60.5°149.7°
N3N4C6H4180.0°179.9°
N3N4C6C7179.9°179.9°
N3N4C6C80.2°0.2°
N4C6C7C8179.8°179.7°
N4C6C8C9179.9°179.8°
N4C6C7H71C89.9°90.0°
N4C6C7H72C150.1°150.0°
N4C6C7H73C30.1°30.0°
C7C6C8C90.0°0.0°
C7C6N4H40.1°0.0°
C6C7H71CH72C120.0°120.0°
C6C7H71CH73C120.0°120.0°
C6C7H72CH73C120.0°120.0°
C6C8C9O10165.8°90.2°
C6C8C9O1114.0°89.8°
C8C6N4H4179.8°179.8°
C8C6C7H71C89.9°89.7°
C8C6C7H72C30.1°30.3°
C8C6C7H73C150.1°150.2°
C8C9O10O11179.8°180.0°
C8C9O10H10179.8°180.0°
O11C9O10H100.0°0.0°
H11CC1H12CH13C120.0°120.1°
H71CC7H72CH73C120.0°120.0°

227344

PDB entries from 2024-11-13

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