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KSV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O5C4sing1.43Å1.39Å
C4C3sing1.53Å1.55Å
C4C5sing1.53Å1.55Å
O3P1doub1.48Å1.48Å
O6C5sing1.43Å1.40Å
C3O4sing1.43Å1.38Å
O2P1sing1.61Å1.50Å
P1O4sing1.61Å1.70Å
P1O1sing1.61Å1.68Å
O1C2sing1.43Å1.38Å
C2C1sing1.53Å1.54Å
C2H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C4H5sing1.09Å1.10Å
C5H6sing1.09Å1.10Å
C5H7sing1.09Å1.10Å
C1H8sing1.09Å1.10Å
C1H9sing1.09Å1.10Å
C1H10sing1.09Å1.10Å
O2H11sing0.97Å0.95Å
O5H12sing0.97Å0.95Å
O6H13sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O5C4C3112.0°109.5°
O5C4C5110.4°109.5°
O5C4H5109.9°109.5°
C4O5H12109.5°114.0°
C3C4C5108.9°109.5°
C4C3O4107.7°109.4°
C4C3H3109.9°109.5°
C4C3H4109.9°109.5°
C3C4H5107.8°109.5°
C4C5O6106.8°109.5°
C5C4H5107.7°109.4°
C4C5H6110.2°109.5°
C4C5H7110.2°109.4°
O3P1O2125.4°109.5°
O3P1O4105.9°109.4°
O3P1O1106.6°109.5°
O6C5H6110.1°109.5°
O6C5H7110.1°109.5°
C5O6H13109.5°114.0°
C3O4P1117.9°123.0°
O4C3H3109.9°109.5°
O4C3H4109.9°109.5°
O2P1O4107.8°109.5°
O2P1O1107.3°109.5°
P1O2H11109.5°114.0°
O4P1O1101.5°109.5°
P1O1C2119.3°123.0°
O1C2C1108.4°109.5°
O1C2H1109.8°109.5°
O1C2H2109.8°109.5°
C1C2H1109.7°109.4°
C1C2H2109.8°109.4°
C2C1H8109.5°109.5°
C2C1H9109.5°109.5°
C2C1H10109.5°109.4°
H1C2H2109.4°109.5°
H3C3H4109.4°109.5°
H6C5H7109.4°109.4°
H8C1H9109.5°109.5°
H8C1H10109.4°109.5°
H9C1H10109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O5C4C3C5122.5°120.0°
O5C4C3H5121.0°120.1°
O5C4C5H5120.0°120.0°
O5C4C5O636.9°64.9°
O5C4C3O437.0°65.0°
O5C4C3H3156.8°55.0°
O5C4C3H482.7°175.0°
O5C4C5H6156.5°175.0°
O5C4C5H782.7°55.1°
C3C4C5H5116.6°119.9°
C3C4C5O6160.3°175.0°
C4C3O4H3119.7°120.0°
C4C3O4H4119.7°120.0°
C4C3O4P1144.0°180.0°
C4C3H3H4120.8°120.1°
C3C4C5H680.1°54.9°
C3C4C5H740.8°65.0°
C3C4O5H12180.0°60.0°
C4C5O6H6119.6°120.1°
C4C5O6H7119.6°120.0°
C5C4C3O485.4°175.0°
C5C4C3H334.3°65.1°
C5C4C3H4154.8°55.0°
C4C5H6H7121.3°119.9°
C5C4O5H1258.4°60.1°
C4C5O6H13180.0°179.9°
O3P1O4C321.0°55.0°
O3P1O2O4125.4°120.0°
O3P1O2O1125.9°120.0°
O3P1O4O1111.1°120.0°
O3P1O1C221.8°55.0°
O3P1O2H110.0°180.0°
O6C5C4H583.0°55.1°
O6C5H6H7121.2°120.0°
C3O4P1O2157.3°65.0°
C3O4P1O190.1°175.0°
O4C3H3H4120.8°120.0°
O4C3C4H5158.0°55.0°
O2P1O4O1112.6°120.1°
O2P1O1C2158.2°65.0°
O4P1O1C288.8°175.0°
P1O4C3H396.3°60.0°
P1O4C3H424.2°60.0°
O4P1O2H11125.5°60.0°
P1O1C2C1179.4°180.0°
P1O1C2H160.8°60.0°
P1O1C2H259.5°60.0°
O1P1O2H11125.9°60.0°
O1C2C1H1119.9°120.0°
O1C2C1H2119.9°120.0°
O1C2H1H2120.5°120.0°
O1C2C1H8180.0°180.0°
O1C2C1H960.0°59.9°
O1C2C1H1060.0°60.0°
C1C2H1H2120.5°119.9°
C2C1H8H9120.0°120.1°
C2C1H8H10120.0°120.0°
C2C1H9H10120.0°119.9°
H1C2C1H860.1°60.0°
H1C2C1H9179.9°60.1°
H1C2C1H1059.8°180.0°
H2C2C1H860.2°60.0°
H2C2C1H959.8°180.0°
H2C2C1H10179.9°60.1°
H3C3C4H582.3°175.0°
H4C3C4H538.2°64.9°
H5C4C5H636.5°65.0°
H5C4C5H7157.4°175.1°
H5C4O5H1260.2°180.0°
H6C5O6H1360.4°60.0°
H7C5O6H1360.4°60.0°
H8C1H9H10119.9°120.0°

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PDB entries from 2024-07-17

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