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SummaryGeometryRelated PDB entries

KSB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N11C35doub1.37Å1.35ÅAromatic
N11C37sing1.31Å1.35ÅAromatic
C34C35sing1.43Å1.40ÅAromatic
C34C33doub1.35Å1.40ÅAromatic
C35C36sing1.42Å1.37ÅAromatic
C37C38doub1.40Å1.41ÅAromatic
C33C32sing1.43Å1.40ÅAromatic
C36C29sing1.43Å1.35ÅAromatic
C36N12doub1.35Å1.39ÅAromatic
C38N12sing1.33Å1.33ÅAromatic
C32C29doub1.42Å1.37ÅAromatic
C32N10sing1.37Å1.35ÅAromatic
N7C27doub1.31Å1.35ÅAromatic
N7C25sing1.37Å1.35ÅAromatic
C27C28sing1.40Å1.40ÅAromatic
C29N9sing1.36Å1.39ÅAromatic
N12RUsing2.06Å1.83Å
C25C24doub1.43Å1.39ÅAromatic
C25C26sing1.42Å1.37ÅAromatic
C24C23sing1.35Å1.40ÅAromatic
N10C31doub1.31Å1.35ÅAromatic
C28N8doub1.33Å1.34ÅAromatic
C26N8sing1.36Å1.39ÅAromatic
C26C19doub1.43Å1.35ÅAromatic
C23C22doub1.43Å1.40ÅAromatic
N8RUsing2.06Å1.82Å
N9RUsing2.07Å1.82Å
N9C30doub1.33Å1.34ÅAromatic
C19C22sing1.42Å1.37ÅAromatic
C19N5sing1.36Å1.39ÅAromatic
C22N6sing1.37Å1.35ÅAromatic
C31C30sing1.40Å1.41ÅAromatic
RUN5sing2.07Å1.83Å
RUN2sing2.04Å1.85Å
RUN1sing2.03Å1.83Å
N5C20doub1.33Å1.34ÅAromatic
N6C21doub1.31Å1.35ÅAromatic
C2N2doub1.32Å1.34ÅAromatic
C2C3sing1.40Å1.40ÅAromatic
C20C21sing1.40Å1.40ÅAromatic
N2C1sing1.35Å1.40ÅAromatic
C3C4doub1.37Å1.39ÅAromatic
N1C12doub1.32Å1.33ÅAromatic
N1C10sing1.35Å1.42ÅAromatic
C12C11sing1.40Å1.41ÅAromatic
C1C10doub1.46Å1.35ÅAromatic
C1C5sing1.42Å1.40ÅAromatic
C4C5sing1.40Å1.38ÅAromatic
C10C8sing1.42Å1.39ÅAromatic
C5C6doub1.46Å1.40ÅAromatic
C11C9doub1.37Å1.40ÅAromatic
C8C9sing1.40Å1.39ÅAromatic
C8C7doub1.46Å1.43ÅAromatic
C6C7sing1.43Å1.40ÅAromatic
C6N3sing1.33Å1.36ÅAromatic
C7N4sing1.33Å1.36ÅAromatic
N3C15doub1.35Å1.36ÅAromatic
N4C13doub1.35Å1.37ÅAromatic
C15C13sing1.43Å1.39ÅAromatic
C15C16sing1.40Å1.39ÅAromatic
C13C14sing1.42Å1.39ÅAromatic
C16C17doub1.38Å1.40ÅAromatic
C14C18doub1.36Å1.39ÅAromatic
C17C18sing1.41Å1.39ÅAromatic
C17C39sing1.44Å1.29Å
C39N74trip1.14Å1.16Å
C11H1sing0.94Å1.08Å
C12H2sing0.94Å1.08Å
C14H3sing0.94Å1.08Å
C16H4sing0.94Å1.08Å
C18H5sing0.94Å1.08Å
C2H6sing0.94Å1.08Å
C20H7sing0.95Å1.08Å
C21H8sing0.95Å1.08Å
C23H9sing0.94Å1.08Å
C24H10sing0.94Å1.08Å
C27H11sing0.95Å1.08Å
C28H12sing0.95Å1.08Å
C3H13sing0.94Å1.08Å
C30H14sing0.95Å1.08Å
C31H15sing0.95Å1.08Å
C33H16sing0.94Å1.08Å
C34H17sing0.94Å1.08Å
C37H18sing0.95Å1.08Å
C38H19sing0.95Å1.08Å
C4H20sing0.94Å1.08Å
C9H21sing0.94Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C35N11C37118.2°117.6°
N11C35C34124.4°120.7°
N11C35C36117.8°120.0°
N11C37C38123.4°122.3°
N11C37H18118.3°118.7°
C35C34C33120.0°121.3°
C34C35C36117.8°119.3°
C35C34H17120.0°119.3°
C34C33C32120.6°121.2°
C34C33H16119.7°119.4°
C33C34H17120.0°119.4°
C35C36C29122.0°119.4°
C35C36N12125.5°120.8°
C37C38N12119.6°121.7°
C38C37H18118.3°118.9°
C37C38H19120.2°119.2°
C33C32C29117.5°119.4°
C33C32N10124.5°120.7°
C32C33H16119.7°119.4°
C29C36N12112.6°119.8°
C36C29C32122.2°119.4°
C36C29N9113.5°119.8°
C36N12C38115.6°117.6°
C36N12RU114.9°108.0°
C38N12RU129.5°134.4°
N12C38H19120.2°119.1°
C29C32N10118.0°119.9°
C32C29N9124.3°120.8°
C32N10C31119.3°117.6°
C27N7C25119.7°117.6°
N7C27C28122.6°122.4°
N7C27H11118.7°118.7°
N7C25C24124.5°120.7°
N7C25C26117.4°120.0°
C27C28N8119.0°121.7°
C28C27H11118.7°118.9°
C27C28H12120.5°119.2°
C29N9RU114.8°107.8°
C29N9C30116.6°117.6°
N12RUN885.8°89.4°
N12RUN984.2°84.6°
N12RUN591.8°92.5°
N12RUN294.3°94.0°
N12RUN1175.6°176.4°
C24C25C26118.1°119.4°
C25C24C23120.2°121.2°
C25C24H10119.9°119.3°
C25C26N8124.3°120.8°
C25C26C19121.7°119.4°
C24C23C22120.3°121.2°
C24C23H9119.8°119.5°
C23C24H10119.9°119.5°
N10C31C30122.2°122.3°
N10C31H15118.9°118.7°
C28N8C26117.0°117.6°
C28N8RU129.4°134.3°
N8C28H12120.5°119.1°
N8C26C19114.0°119.8°
C26N8RU113.5°108.0°
C26C19C22122.3°119.4°
C26C19N5113.3°119.8°
C23C22C19117.5°119.4°
C23C22N6124.2°120.7°
C22C23H9119.9°119.3°
N8RUN989.2°92.5°
N8RUN585.2°84.5°
N8RUN2173.9°175.6°
N8RUN197.0°93.7°
RUN9C30128.5°134.6°
N9RUN5173.3°175.9°
N9RUN296.9°90.6°
N9RUN192.4°93.5°
N9C30C31119.5°121.7°
N9C30H14120.2°119.2°
C22C19N5124.5°120.8°
C19C22N6118.2°120.0°
C19N5RU113.9°107.7°
C19N5C20116.0°117.5°
C22N6C21118.7°117.6°
C31C30H14120.2°119.1°
C30C31H15118.9°118.9°
N5RUN288.7°92.5°
N5RUN191.8°89.5°
RUN5C20130.1°134.7°
N2RUN183.3°83.0°
RUN2C2128.7°131.3°
RUN2C1116.1°110.5°
RUN1C12128.9°131.2°
RUN1C10114.9°110.6°
N5C20C21119.8°121.8°
N5C20H7120.1°119.1°
N6C21C20122.8°122.3°
N6C21H8118.6°118.7°
N2C2C3121.9°123.9°
C2N2C1115.1°117.5°
N2C2H6119.0°117.9°
C2C3C4122.4°118.8°
C3C2H6119.0°118.2°
C2C3H13118.8°120.4°
C21C20H7120.1°119.1°
C20C21H8118.6°119.0°
N2C1C10112.0°117.2°
N2C1C5125.5°122.7°
C3C4C5117.3°119.3°
C4C3H13118.8°120.7°
C3C4H20121.3°120.0°
C12N1C10116.1°117.5°
N1C12C11119.0°123.9°
N1C12H2120.5°117.9°
N1C10C1113.6°117.2°
N1C10C8127.2°122.7°
C12C11C9124.1°118.8°
C12C11H1117.9°120.4°
C11C12H2120.5°118.2°
C10C1C5122.5°120.1°
C1C10C8119.2°120.1°
C1C5C4117.7°117.8°
C1C5C6119.5°120.2°
C4C5C6122.7°122.0°
C5C4H20121.3°120.8°
C10C8C9115.2°117.7°
C10C8C7120.0°120.2°
C5C6C7119.0°119.7°
C5C6N3120.1°118.6°
C11C9C8118.3°119.3°
C9C11H1117.9°120.8°
C11C9H21120.8°119.9°
C9C8C7124.8°122.0°
C8C9H21120.8°120.8°
C8C7C6119.8°119.7°
C8C7N4122.4°118.6°
C7C6N3120.9°121.7°
C6C7N4117.8°121.7°
C6N3C15120.8°117.1°
C7N4C13121.8°117.1°
N3C15C13119.2°121.2°
N3C15C16120.2°119.5°
N4C13C15119.5°121.2°
N4C13C14120.9°119.8°
C13C15C16120.6°119.3°
C15C13C14119.6°119.0°
C15C16C17119.7°120.5°
C15C16H4120.1°119.5°
C13C14C18119.9°120.2°
C13C14H3120.0°119.8°
C16C17C18119.7°120.2°
C16C17C39121.2°120.1°
C17C16H4120.2°120.0°
C14C18C17120.5°120.8°
C18C14H3120.0°120.0°
C14C18H5119.8°119.3°
C18C17C39119.1°119.7°
C17C18H5119.7°119.9°
C17C39N74179.6°180.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N11C35C34C36179.8°179.9°
N11C35C34C33179.9°180.0°
C35N11C37C380.5°0.1°
N11C35C36C29179.6°180.0°
N11C35C36N120.6°0.0°
N11C35C34H170.2°0.1°
C35N11C37H18179.5°180.0°
C37N11C35C34179.6°180.0°
C37N11C35C360.2°0.1°
N11C37C38H18180.0°179.9°
N11C37C38N121.1°0.0°
N11C37C38H19178.9°180.0°
C35C34C33H17180.0°180.0°
C35C34C33C320.6°0.0°
C34C35C36C290.2°0.1°
C34C35C36N12179.3°179.9°
C35C34C33H16179.4°180.0°
C33C34C35C360.3°0.0°
C34C33C32H16180.0°179.9°
C34C33C32C290.3°0.1°
C34C33C32N10179.8°180.0°
C35C36C29N12179.2°180.0°
C35C36N12C381.1°0.1°
C35C36C29C320.5°0.0°
C35C36C29N9179.3°180.0°
C35C36N12RU178.9°179.1°
C36C35C34H17179.7°180.0°
C37C38N12C361.3°0.1°
C37C38N12H19180.0°179.9°
C37C38N12RU178.7°178.8°
C33C32C29C360.3°0.0°
C33C32C29N10179.9°179.9°
C33C32C29N9179.5°180.0°
C33C32N10C31179.9°180.0°
C32C33C34H17179.4°179.9°
C29C36N12C38179.7°179.9°
C36C29C32N9179.8°180.0°
C36C29C32N10179.6°180.0°
C29C36N12RU2.0°0.9°
C36C29N9RU1.8°1.0°
C36C29N9C30178.8°180.0°
C36N12C38RU177.4°178.9°
N12C36C29C32179.7°180.0°
N12C36C29N90.1°0.1°
C36N12RUN887.2°91.5°
C36N12RUN92.3°1.1°
C36N12RUN5172.3°176.0°
C36N12RUN298.9°91.3°
C36N12RUN142.5°59.3°
C36N12C38H19178.7°180.0°
C38N12RUN890.2°87.5°
C38N12RUN9179.7°179.9°
C38N12RUN55.1°3.0°
C38N12RUN283.7°89.7°
C38N12RUN1140.1°121.7°
N12C38C37H18178.9°179.9°
C29C32N10C310.1°0.0°
C32C29N9RU178.4°179.1°
C32C29N9C301.4°0.1°
C29C32C33H16179.7°180.0°
N10C32C29N90.5°0.1°
C32N10C31C300.2°0.0°
C32N10C31H15179.8°180.0°
N10C32C33H160.2°0.1°
N7C27C28H11180.0°179.9°
C27N7C25C24180.0°180.0°
C27N7C25C260.2°0.1°
N7C27C28N80.3°0.1°
N7C27C28H12179.7°180.0°
C25N7C27C280.3°0.1°
N7C25C24C26179.8°179.9°
N7C25C24C23179.9°180.0°
N7C25C26N80.4°0.1°
N7C25C26C19180.0°180.0°
N7C25C24H100.1°0.0°
C25N7C27H11179.7°180.0°
C27C28N8H12180.0°179.9°
C27C28N8C260.9°0.1°
C27C28N8RU178.0°176.3°
C29N9RUN122.3°1.1°
C29N9RUN883.6°88.1°
C29N9RUC30176.7°178.8°
C29N9C30C311.5°0.0°
C29N9RUN550.7°44.9°
C29N9RUN295.9°95.1°
C29N9RUN1179.4°178.1°
C29N9C30H14178.5°180.0°
N12RUN8C2887.0°87.6°
N12RUN8C2690.2°95.7°
N12RUN8N984.3°84.6°
N12RUN8N592.1°92.6°
N12RUN8N291.6°141.1°
N12RUN8N1176.6°178.3°
N12RUN9N553.0°46.0°
N12RUN9N293.6°94.0°
N12RUN9N1177.2°177.0°
N12RUN9C30178.9°179.8°
N12RUN5C1984.0°92.3°
N12RUN5N294.3°94.1°
N12RUN5N1177.5°177.1°
N12RUN2N1176.3°178.1°
N12RUN5C2094.6°90.9°
N12RUN2C25.1°1.5°
N12RUN2C1179.8°171.5°
N12RUN1C12121.9°147.5°
N12RUN1C1059.6°42.7°
RUN12C38H191.3°1.1°
C25C24C23H10180.0°180.0°
C24C25C26N8179.4°179.9°
C24C25C26C190.2°0.1°
C25C24C23C220.2°0.0°
C25C24C23H9179.8°180.0°
C26C25C24C230.3°0.0°
C25C26N8C281.0°0.1°
C25C26N8C19179.6°179.9°
C25C26N8RU178.5°177.2°
C25C26C19C220.0°0.0°
C25C26C19N5179.8°179.9°
C26C25C24H10179.7°179.9°
C24C23C22H9180.0°180.0°
C24C23C22C190.0°0.0°
C24C23C22N6180.0°180.0°
N10C31C30N91.0°0.0°
N10C31C30H15180.0°180.0°
N10C31C30H14179.0°180.0°
C28N8C26RU177.5°177.3°
C28N8C26C19179.4°180.0°
C28N8RUN92.7°3.0°
C28N8RUN5179.1°179.8°
C28N8RUN2178.6°131.4°
C28N8RUN189.6°90.7°
N8C28C27H11179.7°180.0°
C26N8RUN9174.4°179.7°
N8C26C19C22179.6°179.9°
N8C26C19N50.5°0.0°
C26N8RUN52.0°3.1°
C26N8RUN21.4°45.3°
C26N8RUN193.2°86.0°
C26N8C28H12179.1°180.0°
C26C19C22C230.1°0.0°
C19C26N8RU1.9°2.7°
C26C19C22N5179.8°179.9°
C26C19C22N6179.9°180.0°
C26C19N5RU1.0°2.7°
C26C19N5C20179.8°179.9°
C23C22C19N6180.0°180.0°
C23C22C19N5179.9°179.9°
C23C22N6C21179.8°180.0°
C22C23C24H10179.8°180.0°
N8RUN9N532.9°43.2°
N8RUN9N2179.6°176.8°
N8RUN9N196.9°93.8°
N8RUN9C3093.0°90.6°
N8RUN5C191.7°3.1°
N8RUN5N2179.9°176.7°
N8RUN5N196.8°93.7°
N8RUN2N192.6°41.0°
N8RUN5C20179.8°179.9°
N8RUN2C286.0°139.4°
N8RUN2C189.1°30.6°
N8RUN1C127.5°3.2°
N8RUN1C10171.0°166.6°
RUN8C28H122.0°3.6°
N9RUN5C1931.4°46.5°
RUN9C30C31178.1°178.7°
N9RUN5N2146.9°140.0°
N9RUN5N1129.9°137.1°
N9RUN2N191.6°93.5°
N9RUN5C20147.2°136.7°
N9RUN2C289.8°86.2°
N9RUN2C195.1°103.9°
N9RUN1C1282.0°89.5°
N9RUN1C1099.6°100.6°
RUN9C30H141.9°1.3°
N9C30C31H14180.0°180.0°
C30N9RUN5125.9°133.8°
C30N9RUN287.4°86.2°
C30N9RUN13.9°3.2°
N9C30C31H15179.0°180.0°
C22C19N5RU178.8°177.3°
C22C19N5C200.0°0.2°
C19C22N6C210.2°0.0°
C19C22C23H9180.0°180.0°
N5C19C22N60.1°0.1°
C19N5RUC20178.6°176.8°
C19N5RUN2178.3°173.5°
C19N5RUN198.5°90.6°
C19N5C20C210.0°0.2°
C19N5C20H7180.0°180.0°
C22N6C21C200.2°0.1°
C22N6C21H8179.8°180.0°
N6C22C23H90.0°0.0°
N5RUN2N192.0°89.2°
N5RUN2C286.6°91.2°
RUN5C20C21178.6°176.3°
N5RUN2C188.6°78.8°
N5RUN1C1292.9°87.7°
N5RUN1C1085.6°82.2°
RUN5C20H71.4°3.4°
N2RUN5C200.3°3.3°
RUN2C2C1175.2°169.4°
RUN2C2C3176.1°168.9°
N2RUN1C12178.6°179.7°
N2RUN1C102.9°10.4°
RUN2C1C103.2°8.7°
RUN2C1C5177.2°170.9°
RUN2C2H63.8°10.8°
N1RUN5C2082.9°86.2°
N1RUN2C2178.6°179.6°
N1RUN2C13.4°10.4°
RUN1C12C10178.5°169.3°
RUN1C12C11178.2°168.8°
RUN1C10C11.9°8.8°
RUN1C10C8178.7°170.9°
RUN1C12H21.8°10.9°
N5C20C21N60.1°0.2°
N5C20C21H7180.0°179.8°
N5C20C21H8179.9°179.9°
N6C21C20H8180.0°179.9°
N6C21C20H7179.9°179.9°
N2C2C3H6180.0°179.7°
N2C2C3C40.3°0.3°
C2N2C1C10179.0°179.8°
C2N2C1C51.4°0.6°
N2C2C3H13179.7°179.8°
C3C2N2C11.0°0.5°
C2C3C4H13180.0°180.0°
C2C3C4C50.0°0.0°
C2C3C4H20180.0°179.9°
N2C1C10N10.8°0.1°
N2C1C10C5179.5°179.7°
N2C1C5C41.2°0.4°
N2C1C10C8178.7°179.7°
N2C1C5C6179.1°179.7°
C1N2C2H6179.0°179.8°
C3C4C5C10.4°0.1°
C3C4C5H20180.0°180.0°
C3C4C5C6179.9°180.0°
C4C3C2H6179.6°180.0°
N1C12C11H2180.0°179.7°
C12N1C10C1179.4°179.8°
C12N1C10C80.0°0.5°
N1C12C11C90.3°0.3°
N1C12C11H1179.7°179.8°
C10N1C12C110.3°0.5°
N1C10C1C8179.5°179.8°
N1C10C1C5179.6°179.7°
N1C10C8C90.2°0.2°
N1C10C8C7179.8°179.8°
C10N1C12H2179.7°179.8°
C12C11C9H1180.0°179.9°
C12C11C9C80.0°0.0°
C12C11C9H21180.0°179.9°
C10C1C5C4179.4°180.0°
C10C1C5C60.4°0.1°
C1C10C8C9179.7°180.0°
C1C10C8C70.8°0.0°
C1C5C4C6179.7°179.9°
C5C1C10C80.9°0.0°
C1C5C6C70.2°0.1°
C1C5C6N3179.8°180.0°
C1C5C4H20179.6°179.9°
C4C5C6C7179.9°180.0°
C4C5C6N30.1°0.1°
C5C4C3H13180.0°180.0°
C10C8C9C110.2°0.0°
C10C8C9C7179.5°180.0°
C10C8C7C60.2°0.0°
C10C8C7N4179.4°180.0°
C10C8C9H21179.7°180.0°
C5C6C7C80.3°0.1°
C5C6C7N3180.0°179.9°
C5C6C7N4179.9°180.0°
C5C6N3C15179.8°179.9°
C6C5C4H200.1°0.0°
C11C9C8H21180.0°180.0°
C11C9C8C7179.7°180.0°
C9C11C12H2179.7°180.0°
C9C8C7C6179.7°180.0°
C9C8C7N40.1°0.0°
C8C9C11H1180.0°180.0°
C8C7C6N4179.6°179.9°
C8C7C6N3179.7°180.0°
C8C7N4C13179.5°179.9°
C7C8C9H210.2°0.0°
C7C6N3C150.2°0.0°
C6C7N4C130.2°0.1°
N3C6C7N40.1°0.1°
C6N3C15C130.0°0.1°
C6N3C15C16179.7°180.0°
C7N4C13C150.3°0.1°
C7N4C13C14179.4°179.9°
N3C15C13N40.2°0.0°
N3C15C13C16179.8°180.0°
N3C15C13C14179.5°180.0°
N3C15C16C17179.5°179.9°
N3C15C16H40.5°0.1°
N4C13C15C14179.7°180.0°
N4C13C15C16180.0°180.0°
N4C13C14C18179.7°180.0°
N4C13C14H30.3°0.0°
C13C15C16C170.7°0.1°
C15C13C14C180.6°0.0°
C15C13C14H3179.4°180.0°
C13C15C16H4179.3°179.9°
C16C15C13C140.3°0.1°
C15C16C17H4180.0°179.8°
C15C16C17C181.4°0.1°
C15C16C17C39179.6°180.0°
C13C14C18H3180.0°180.0°
C13C14C18C170.1°0.0°
C13C14C18H5179.9°180.0°
C16C17C18C141.1°0.1°
C16C17C18C39178.3°179.9°
C16C17C39N74178.8°53.0°
C16C17C18H5178.9°179.9°
C14C18C17H5180.0°180.0°
C14C18C17C39179.4°180.0°
C18C17C39N742.9°127.1°
C17C18C14H3179.9°180.0°
C18C17C16H4178.6°179.9°
C39C17C16H40.4°0.2°
C39C17C18H50.6°0.0°
H1C11C12H20.3°0.1°
H1C11C9H210.0°0.0°
H3C14C18H50.1°0.1°
H6C2C3H130.3°0.1°
H7C20C21H80.1°0.1°
H9C23C24H100.2°0.0°
H11C27C28H120.3°0.1°
H13C3C4H200.0°0.0°
H14C30C31H151.1°0.1°
H16C33C34H170.6°0.0°
H18C37C38H191.1°0.0°

259015

PDB entries from 2026-09-02

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