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KL2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3VVsing1.84Å2.10Å
C5'C4'sing1.53Å1.53Å
C5'O5'sing1.43Å1.43Å
C4'O4'sing1.44Å1.44Å
C4'C3'sing1.54Å1.52Å
O4'C1'sing1.44Å1.44Å
VO1Vsing1.84Å2.10Å
VO2'sing1.84Å1.99Å
VO3'sing1.84Å2.00Å
VO2Vsing1.84Å1.97Å
O2'C2'sing1.43Å1.42Å
O3'C3'sing1.43Å1.43Å
C1'C2'sing1.54Å1.52Å
C1'N9sing1.46Å1.49Å
C3'C2'sing1.54Å1.52Å
N9C8sing1.36Å1.33ÅAromatic
N9C4sing1.37Å1.34ÅAromatic
C8N7doub1.30Å1.35ÅAromatic
C4N3doub1.33Å1.35ÅAromatic
C4C5sing1.40Å1.39ÅAromatic
N3C2sing1.32Å1.34ÅAromatic
N7C5sing1.35Å1.34ÅAromatic
C5C6doub1.41Å1.39ÅAromatic
C2N1doub1.32Å1.34ÅAromatic
C6N1sing1.33Å1.35ÅAromatic
C6N6sing1.38Å1.35Å
O2VH1sing0.97Å0.95Å
O1VHOV1sing0.97Å0.95Å
O3VHOV3sing0.97Å0.95Å
C3'H3'sing1.08Å1.10Å
C2'H2'sing1.08Å1.10Å
C4'H4'sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
O5'HO5'sing0.97Å0.95Å
C1'H1'sing1.09Å1.10Å
C2H2sing1.08Å1.08Å
N6HN6Asing0.97Å1.00Å
N6HN6sing0.97Å1.00Å
C8H8sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3VVO1V93.3°91.2°
O3VVO2'89.6°91.2°
O3VVO3'119.4°120.0°
O3VVO2V120.5°120.0°
VO3VHOV3109.5°114.0°
C4'C5'O5'110.3°109.4°
C5'C4'O4'113.3°110.2°
C5'C4'C3'111.6°110.1°
C5'C4'H4'108.6°110.4°
C4'C5'H5'1109.3°109.5°
C4'C5'H5'2109.3°109.4°
O5'C5'H5'1109.3°109.5°
O5'C5'H5'2109.3°109.4°
C5'O5'HO5'109.5°114.0°
O4'C4'C3'104.9°105.2°
C4'O4'C1'110.4°105.7°
O4'C4'H4'109.7°110.4°
C4'C3'O3'114.6°109.7°
C4'C3'C2'101.9°104.2°
C4'C3'H3'109.1°111.1°
C3'C4'H4'108.7°110.5°
O4'C1'C2'105.6°105.1°
O4'C1'N9112.9°110.1°
O4'C1'H1'110.2°110.4°
O1VVO2'175.5°175.4°
O1VVO3'93.6°91.2°
O1VVO2V91.3°91.1°
VO1VHOV1109.5°114.0°
O2'VO3'81.9°84.2°
O2'VO2V90.3°91.2°
VO2'C2'110.1°106.7°
O3'VO2V119.4°119.9°
VO3'C3'113.1°106.6°
VO2VH1109.5°114.0°
O2'C2'C1'111.9°109.7°
O2'C2'C3'108.8°109.1°
O2'C2'H2'111.2°111.2°
O3'C3'C2'111.3°109.1°
O3'C3'H3'110.3°111.3°
C2'C1'N9109.5°110.2°
C1'C2'C3'105.2°104.3°
C1'C2'H2'109.8°111.1°
C2'C1'H1'109.1°110.4°
C1'N9C8125.7°126.3°
C1'N9C4127.1°126.3°
N9C1'H1'109.5°110.4°
C2'C3'H3'109.1°111.2°
C3'C2'H2'109.8°111.1°
C8N9C4107.2°107.4°
N9C8N7110.6°110.0°
N9C8H8124.7°125.0°
N9C4N3132.9°134.9°
N9C4C5107.8°106.0°
C8N7C5106.8°109.4°
N7C8H8124.7°125.0°
N3C4C5119.3°119.1°
C4N3C2120.1°120.6°
C4C5N7107.6°107.2°
C4C5C6119.5°118.2°
N3C2N1121.5°122.5°
N3C2H2119.2°118.7°
N7C5C6132.9°134.6°
C5C6N1118.9°118.4°
C5C6N6120.6°120.8°
C2N1C6120.7°121.2°
N1C2H2119.3°118.8°
N1C6N6120.5°120.8°
C6N6HN6A109.5°120.0°
C6N6HN6109.5°119.9°
H5'1C5'H5'2109.4°109.5°
HN6AN6HN6109.4°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3VVO1VO2'128.9°120.4°
O3VVO1VO3'119.8°120.0°
O3VVO1VO2V120.6°120.0°
O3VVO2'O3'119.8°120.0°
O3VVO2'O2V120.5°120.0°
O3VVO3'O2V170.6°176.0°
O3VVO2'C2'149.3°163.1°
O3VVO3'C3'94.8°131.2°
O3VVO2VH1180.0°92.0°
O3VVO1VHOV1180.0°60.0°
C4'C5'O5'H5'1120.1°120.0°
C4'C5'O5'H5'2120.2°119.9°
C5'C4'O4'C3'122.0°118.7°
C5'C4'O4'H4'121.5°122.2°
C5'C4'C3'H4'119.7°122.2°
C5'C4'O4'C1'146.2°157.3°
C5'C4'C3'O3'82.7°101.8°
C5'C4'C3'C2'156.9°141.5°
C5'C4'C3'H3'41.6°21.6°
C4'C5'H5'1H5'2119.6°120.0°
C4'C5'O5'HO5'180.0°180.0°
O5'C5'C4'O4'51.1°66.4°
O5'C5'C4'C3'67.1°178.0°
O5'C5'C4'H4'173.2°55.8°
O5'C5'H5'1H5'2119.6°120.0°
O4'C4'C3'H4'117.2°119.1°
O4'C4'C3'O3'154.2°139.5°
C4'O4'C1'C2'4.0°38.6°
C4'O4'C1'N9123.5°157.3°
O4'C4'C3'C2'33.8°22.9°
O4'C4'C3'H3'81.5°97.0°
O4'C4'C5'H5'169.0°173.5°
O4'C4'C5'H5'2171.2°53.5°
C4'O4'C1'H1'113.7°80.5°
C3'C4'O4'C1'24.2°38.6°
C4'C3'O3'V104.8°146.2°
C4'C3'C2'O2'88.7°117.2°
C4'C3'O3'C2'115.0°113.6°
C4'C3'O3'H3'123.6°123.3°
C4'C3'C2'C1'31.4°0.1°
C4'C3'C2'H3'115.3°119.8°
C4'C3'C2'H2'149.4°119.8°
C3'C4'C5'H5'1172.8°58.0°
C3'C4'C5'H5'253.1°62.1°
O4'C1'C2'O2'100.2°139.7°
O4'C1'C2'N9121.8°118.6°
O4'C1'C2'H1'118.4°119.1°
O4'C1'N9H1'123.1°122.2°
O4'C1'C2'C3'17.8°22.9°
O4'C1'N9C85.2°23.5°
O4'C1'N9C4175.1°156.5°
O4'C1'C2'H2'135.8°96.9°
C1'O4'C4'H4'92.4°80.5°
O1VVO2'O3'9.2°0.4°
O1VVO2'O2V110.5°119.5°
O1VVO3'O2V93.5°92.0°
O1VVO2'C2'20.3°42.7°
O1VVO3'C3'169.4°136.8°
O1VVO2VH185.4°0.0°
O1VVO3VHOV3180.0°0.1°
O2'VO3'O2V85.8°88.0°
O2'VO3'C3'9.9°43.2°
VO2'C2'C1'157.8°146.1°
VO2'C2'C3'41.9°32.4°
O2'VO2VH190.3°176.0°
O2'VO1VHOV151.1°179.6°
O2'VO3VHOV33.5°175.9°
VO2'C2'H2'79.1°90.5°
O3'VO2'C2'29.5°43.1°
VO3'C3'C2'10.2°32.6°
O3'VO2VH19.4°92.1°
O3'VO1VHOV160.2°180.0°
O3'VO3VHOV384.0°92.0°
VO3'C3'H3'131.6°90.5°
O2VVO2'C2'90.2°76.8°
O2VVO3'C3'75.8°44.8°
O2VVO1VHOV159.4°60.1°
O2VVO3VHOV386.6°92.1°
O2'C2'C3'O3'34.0°0.1°
O2'C2'C1'C3'118.0°116.7°
O2'C2'C1'H2'124.0°123.4°
O2'C2'C1'N9138.0°101.7°
O2'C2'C3'H2'121.9°123.0°
O2'C2'C3'H3'156.0°123.0°
O2'C2'C1'H1'18.2°20.6°
O3'C3'C2'C1'154.0°117.0°
O3'C3'C2'H3'122.0°123.1°
O3'C3'C2'H2'87.9°123.1°
O3'C3'C4'H4'37.0°20.4°
C2'C1'N9H1'119.6°122.3°
C1'C2'C3'H2'118.0°119.8°
C2'C1'N9C8122.5°92.0°
C2'C1'N9C457.8°88.0°
C1'C2'C3'H3'83.9°119.8°
N9C1'C2'C3'104.0°141.6°
C1'N9C8C4179.8°180.0°
C1'N9C8N7180.0°180.0°
C1'N9C4N30.4°0.1°
C1'N9C4C5179.9°180.0°
N9C1'C2'H2'14.0°21.7°
C1'N9C8H80.0°0.0°
C2'C3'C4'H4'83.4°96.3°
C3'C2'C1'H1'136.2°96.2°
N9C8N7H8180.0°180.0°
C8N9C4N3179.9°179.9°
C8N9C4C50.1°0.1°
N9C8N7C50.3°0.0°
C8N9C1'H1'117.9°145.7°
C4N9C8N70.3°0.0°
N9C4N3C5179.7°179.8°
N9C4N3C2179.7°179.9°
N9C4C5N70.0°0.1°
N9C4C5C6179.9°180.0°
C4N9C1'H1'61.8°34.3°
C4N9C8H8179.7°180.0°
C8N7C5C40.2°0.0°
C8N7C5C6179.9°180.0°
N3C4C5N7179.7°179.9°
N3C4C5C60.2°0.1°
C4N3C2N10.3°0.1°
C4N3C2H2179.7°180.0°
C5C4N3C20.0°0.1°
C4C5N7C6179.9°180.0°
C4C5C6N10.1°0.1°
C4C5C6N6180.0°179.9°
N3C2N1H2180.0°179.9°
N3C2N1C60.3°0.1°
N7C5C6N1179.7°180.0°
N7C5C6N60.1°0.0°
C5N7C8H8179.7°180.0°
C5C6N1C20.1°0.1°
C5C6N1N6179.9°180.0°
C5C6N6HN6A179.9°0.1°
C5C6N6HN660.1°180.0°
C2N1C6N6179.8°180.0°
C6N1C2H2179.7°180.0°
N1C6N6HN6A0.0°180.0°
N1C6N6HN6120.0°0.0°
C6N6HN6AHN6120.0°179.9°
H3'C3'C2'H2'34.1°0.0°
H3'C3'C4'H4'161.2°143.8°
H2'C2'C1'H1'105.8°144.0°
H4'C4'C5'H5'153.0°64.3°
H4'C4'C5'H5'266.7°175.7°
H5'1C5'O5'HO5'59.9°59.9°
H5'2C5'O5'HO5'59.8°60.1°

217705

PDB entries from 2024-03-27

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