KKD
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C | O | doub | 1.21Å | 1.20Å | |
C | CA | sing | 1.51Å | 1.54Å | |
CB | CA | sing | 1.53Å | 1.54Å | |
CB | CG | sing | 1.51Å | 1.54Å | |
CA | N | sing | 1.46Å | 1.45Å | |
CG | OD1 | doub | 1.21Å | 1.26Å | |
CG | OD2 | sing | 1.34Å | 1.27Å | |
OT | CT1 | doub | 1.21Å | 1.17Å | |
N | CT1 | sing | 1.35Å | 1.42Å | |
CT1 | CT2 | sing | 1.51Å | 1.51Å | |
N | H | sing | 0.97Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.34Å | 1.03Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
OD2 | H2 | sing | 0.97Å | 0.95Å | |
CT2 | HT23 | sing | 1.09Å | 1.10Å | |
CT2 | HT22 | sing | 1.09Å | 1.10Å | |
CT2 | HT21 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 120.3° | 120.0° |
O | C | OXT | 119.8° | 120.0° |
C | CA | CB | 108.7° | 109.5° |
C | CA | N | 110.3° | 109.5° |
C | CA | HA | 108.7° | 109.5° |
CA | C | OXT | 119.8° | 120.0° |
CA | CB | CG | 112.3° | 109.5° |
CB | CA | N | 110.6° | 109.5° |
CB | CA | HA | 108.7° | 109.5° |
CA | CB | HB3 | 108.8° | 109.5° |
CA | CB | HB2 | 108.7° | 109.5° |
CB | CG | OD1 | 118.7° | 119.9° |
CB | CG | OD2 | 121.9° | 120.0° |
CG | CB | HB3 | 108.8° | 109.5° |
CG | CB | HB2 | 108.8° | 109.5° |
CA | N | CT1 | 122.6° | 120.0° |
CA | N | H | 118.7° | 120.0° |
N | CA | HA | 109.9° | 109.4° |
OD1 | CG | OD2 | 119.3° | 120.1° |
CG | OD2 | H2 | 109.5° | 117.0° |
OT | CT1 | N | 119.4° | 120.0° |
OT | CT1 | CT2 | 121.2° | 120.0° |
N | CT1 | CT2 | 119.3° | 120.0° |
CT1 | N | H | 118.7° | 120.0° |
CT1 | CT2 | HT23 | 109.5° | 109.5° |
CT1 | CT2 | HT22 | 109.5° | 109.5° |
CT1 | CT2 | HT21 | 109.5° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
HB3 | CB | HB2 | 109.5° | 109.4° |
HT23 | CT2 | HT22 | 109.5° | 109.4° |
HT23 | CT2 | HT21 | 109.5° | 109.4° |
HT22 | CT2 | HT21 | 109.4° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 180.0° | 180.0° |
O | C | CA | CB | 100.2° | 120.0° |
O | C | CA | N | 21.2° | 0.0° |
O | C | CA | HA | 141.7° | 120.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
C | CA | CB | N | 121.1° | 120.1° |
C | CA | CB | HA | 118.1° | 120.0° |
C | CA | CB | CG | 160.1° | 175.0° |
C | CA | N | HA | 119.8° | 120.0° |
C | CA | N | CT1 | 63.0° | 84.9° |
C | CA | N | H | 117.0° | 94.8° |
C | CA | CB | HB3 | 79.5° | 65.0° |
C | CA | CB | HB2 | 39.6° | 54.9° |
CA | C | OXT | HXT | 180.0° | 179.9° |
CA | CB | CG | HB3 | 120.4° | 120.0° |
CA | CB | CG | HB2 | 120.4° | 120.1° |
CB | CA | N | HA | 120.0° | 120.0° |
CA | CB | CG | OD1 | 153.2° | 0.0° |
CA | CB | CG | OD2 | 23.8° | 180.0° |
CB | CA | N | CT1 | 176.8° | 155.0° |
CB | CA | N | H | 3.2° | 25.3° |
CB | CA | C | OXT | 79.8° | 60.0° |
CA | CB | HB3 | HB2 | 118.7° | 120.0° |
CG | CB | CA | N | 78.8° | 65.0° |
CB | CG | OD1 | OD2 | 177.1° | 180.0° |
CG | CB | CA | HA | 41.9° | 55.0° |
CG | CB | HB3 | HB2 | 118.7° | 120.0° |
CB | CG | OD2 | H2 | 177.0° | 180.0° |
CA | N | CT1 | OT | 2.3° | 0.3° |
CA | N | CT1 | H | 180.0° | 179.7° |
CA | N | CT1 | CT2 | 178.0° | 179.7° |
N | CA | C | OXT | 158.8° | 180.0° |
N | CA | CB | HB3 | 41.6° | 55.0° |
N | CA | CB | HB2 | 160.8° | 175.0° |
OD1 | CG | CB | HB3 | 32.8° | 120.0° |
OD1 | CG | CB | HB2 | 86.4° | 120.1° |
OD1 | CG | OD2 | H2 | 0.0° | 0.0° |
OD2 | CG | CB | HB3 | 144.2° | 60.0° |
OD2 | CG | CB | HB2 | 96.6° | 60.0° |
OT | CT1 | N | CT2 | 175.7° | 179.9° |
OT | CT1 | N | H | 177.7° | 179.9° |
OT | CT1 | CT2 | HT23 | 0.0° | 180.0° |
OT | CT1 | CT2 | HT22 | 120.0° | 60.0° |
OT | CT1 | CT2 | HT21 | 120.0° | 60.1° |
CT1 | N | CA | HA | 56.8° | 35.0° |
N | CT1 | CT2 | HT23 | 175.7° | 0.0° |
N | CT1 | CT2 | HT22 | 55.6° | 120.0° |
N | CT1 | CT2 | HT21 | 64.3° | 120.0° |
CT2 | CT1 | N | H | 2.0° | 0.0° |
CT1 | CT2 | HT23 | HT22 | 120.0° | 120.0° |
CT1 | CT2 | HT23 | HT21 | 120.0° | 120.0° |
CT1 | CT2 | HT22 | HT21 | 120.0° | 120.1° |
H | N | CA | HA | 123.2° | 145.3° |
HA | CA | C | OXT | 38.3° | 60.0° |
HA | CA | CB | HB3 | 162.3° | 175.0° |
HA | CA | CB | HB2 | 78.5° | 65.1° |
HT23 | CT2 | HT22 | HT21 | 120.0° | 119.9° |