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KKD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
COdoub1.21Å1.20Å
CCAsing1.51Å1.54Å
CBCAsing1.53Å1.54Å
CBCGsing1.51Å1.54Å
CANsing1.46Å1.45Å
CGOD1doub1.21Å1.26Å
CGOD2sing1.34Å1.27Å
OTCT1doub1.21Å1.17Å
NCT1sing1.35Å1.42Å
CT1CT2sing1.51Å1.51Å
NHsing0.97Å1.00Å
CAHAsing1.09Å1.10Å
COXTsing1.34Å1.03Å
CBHB3sing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
OD2H2sing0.97Å0.95Å
CT2HT23sing1.09Å1.10Å
CT2HT22sing1.09Å1.10Å
CT2HT21sing1.09Å1.10Å
OXTHXTsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OCCA120.3°120.0°
OCOXT119.8°120.0°
CCACB108.7°109.5°
CCAN110.3°109.5°
CCAHA108.7°109.5°
CACOXT119.8°120.0°
CACBCG112.3°109.5°
CBCAN110.6°109.5°
CBCAHA108.7°109.5°
CACBHB3108.8°109.5°
CACBHB2108.7°109.5°
CBCGOD1118.7°119.9°
CBCGOD2121.9°120.0°
CGCBHB3108.8°109.5°
CGCBHB2108.8°109.5°
CANCT1122.6°120.0°
CANH118.7°120.0°
NCAHA109.9°109.4°
OD1CGOD2119.3°120.1°
CGOD2H2109.5°117.0°
OTCT1N119.4°120.0°
OTCT1CT2121.2°120.0°
NCT1CT2119.3°120.0°
CT1NH118.7°120.0°
CT1CT2HT23109.5°109.5°
CT1CT2HT22109.5°109.5°
CT1CT2HT21109.5°109.5°
COXTHXT109.5°117.0°
HB3CBHB2109.5°109.4°
HT23CT2HT22109.5°109.4°
HT23CT2HT21109.5°109.4°
HT22CT2HT21109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OCCAOXT180.0°180.0°
OCCACB100.2°120.0°
OCCAN21.2°0.0°
OCCAHA141.7°120.0°
OCOXTHXT0.0°0.0°
CCACBN121.1°120.1°
CCACBHA118.1°120.0°
CCACBCG160.1°175.0°
CCANHA119.8°120.0°
CCANCT163.0°84.9°
CCANH117.0°94.8°
CCACBHB379.5°65.0°
CCACBHB239.6°54.9°
CACOXTHXT180.0°179.9°
CACBCGHB3120.4°120.0°
CACBCGHB2120.4°120.1°
CBCANHA120.0°120.0°
CACBCGOD1153.2°0.0°
CACBCGOD223.8°180.0°
CBCANCT1176.8°155.0°
CBCANH3.2°25.3°
CBCACOXT79.8°60.0°
CACBHB3HB2118.7°120.0°
CGCBCAN78.8°65.0°
CBCGOD1OD2177.1°180.0°
CGCBCAHA41.9°55.0°
CGCBHB3HB2118.7°120.0°
CBCGOD2H2177.0°180.0°
CANCT1OT2.3°0.3°
CANCT1H180.0°179.7°
CANCT1CT2178.0°179.7°
NCACOXT158.8°180.0°
NCACBHB341.6°55.0°
NCACBHB2160.8°175.0°
OD1CGCBHB332.8°120.0°
OD1CGCBHB286.4°120.1°
OD1CGOD2H20.0°0.0°
OD2CGCBHB3144.2°60.0°
OD2CGCBHB296.6°60.0°
OTCT1NCT2175.7°179.9°
OTCT1NH177.7°179.9°
OTCT1CT2HT230.0°180.0°
OTCT1CT2HT22120.0°60.0°
OTCT1CT2HT21120.0°60.1°
CT1NCAHA56.8°35.0°
NCT1CT2HT23175.7°0.0°
NCT1CT2HT2255.6°120.0°
NCT1CT2HT2164.3°120.0°
CT2CT1NH2.0°0.0°
CT1CT2HT23HT22120.0°120.0°
CT1CT2HT23HT21120.0°120.0°
CT1CT2HT22HT21120.0°120.1°
HNCAHA123.2°145.3°
HACACOXT38.3°60.0°
HACACBHB3162.3°175.0°
HACACBHB278.5°65.1°
HT23CT2HT22HT21120.0°119.9°

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PDB entries from 2024-07-17

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