Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

KED

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O07P06doub1.48Å1.53Å
O09P06sing1.61Å1.47Å
C13C12doub1.39Å1.37ÅAromatic
C13C14sing1.38Å1.35ÅAromatic
C12C11sing1.37Å1.39ÅAromatic
C14C15doub1.39Å1.38ÅAromatic
P06O08sing1.61Å1.54Å
P06C05sing1.82Å1.87Å
C11C10doub1.40Å1.37ÅAromatic
C15C10sing1.41Å1.38ÅAromatic
C15N16sing1.38Å1.32Å
C10C04sing1.46Å1.37Å
N16C02sing1.34Å1.30Å
C04C03doub1.36Å1.36Å
C04C05sing1.51Å1.54Å
C02O01doub1.22Å1.13Å
C02C03sing1.41Å1.41Å
C03H1sing1.08Å1.08Å
C05H2sing1.09Å1.10Å
C05H3sing1.09Å1.10Å
C11H4sing1.08Å1.08Å
C12H5sing1.08Å1.08Å
C13H6sing1.08Å1.08Å
C14H7sing1.08Å1.08Å
N16H8sing0.97Å1.00Å
O08H9sing0.97Å0.95Å
O09H10sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O07P06O09114.1°109.5°
O07P06O08109.4°109.5°
O07P06C05109.9°109.5°
O09P06O08109.1°109.5°
O09P06C05105.8°109.5°
P06O09H10109.5°114.0°
C12C13C14118.8°120.7°
C13C12C11120.6°120.6°
C13C12H5119.7°119.7°
C12C13H6120.6°119.7°
C13C14C15122.4°119.7°
C14C13H6120.6°119.7°
C13C14H7118.8°120.2°
C12C11C10119.3°119.7°
C12C11H4120.4°120.2°
C11C12H5119.7°119.7°
C14C15C10118.3°119.4°
C14C15N16120.8°120.9°
C15C14H7118.8°120.1°
O08P06C05108.3°109.5°
P06O08H9109.5°114.0°
P06C05C04112.6°109.5°
P06C05H2108.7°109.5°
P06C05H3108.7°109.5°
C11C10C15120.6°119.9°
C11C10C04121.8°121.1°
C10C11H4120.3°120.2°
C10C15N16120.9°119.7°
C15C10C04117.5°119.0°
C15N16C02123.1°120.9°
C15N16H8118.4°119.6°
C10C04C03120.4°118.5°
C10C04C05120.8°120.7°
N16C02O01121.2°119.2°
N16C02C03118.5°121.7°
C02N16H8118.4°119.5°
C03C04C05118.7°120.8°
C04C03C02119.5°120.2°
C04C03H1120.3°119.9°
C04C05H2108.7°109.5°
C04C05H3108.7°109.5°
O01C02C03120.3°119.1°
C02C03H1120.3°119.9°
H2C05H3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O07P06O09O08122.7°120.0°
O07P06O09C05121.0°120.0°
O07P06O08C05119.7°120.0°
O07P06C05C0432.4°55.0°
O07P06C05H2152.8°175.0°
O07P06C05H388.1°65.0°
O07P06O08H90.0°180.0°
O07P06O09H100.0°60.0°
O09P06O08C05114.8°120.0°
O09P06C05C0491.3°175.0°
O09P06C05H229.1°65.0°
O09P06C05H3148.2°55.0°
O09P06O08H9125.5°60.0°
C12C13C14H6180.0°179.9°
C13C12C11H5180.0°180.0°
C12C13C14C150.4°0.2°
C13C12C11C100.0°0.0°
C13C12C11H4180.0°180.0°
C12C13C14H7179.6°180.0°
C14C13C12C110.3°0.1°
C13C14C15H7180.0°179.9°
C13C14C15C100.3°0.2°
C13C14C15N16179.9°179.7°
C14C13C12H5179.7°180.0°
C12C11C10H4180.0°179.9°
C12C11C10C150.2°0.0°
C12C11C10C04177.6°180.0°
C11C12C13H6179.7°180.0°
C14C15C10C110.0°0.1°
C14C15C10N16179.8°179.9°
C14C15C10C04177.8°179.9°
C14C15N16C02179.5°179.7°
C15C14C13H6179.5°180.0°
C14C15N16H80.5°0.0°
O08P06C05C04151.8°65.0°
O08P06C05H287.8°55.0°
O08P06C05H331.3°175.0°
O08P06O09H10122.7°60.1°
P06C05C04C1076.5°180.0°
P06C05C04C0399.0°0.0°
P06C05C04H2120.5°120.0°
P06C05C04H3120.5°120.0°
P06C05H2H3118.6°120.0°
C05P06O08H9119.7°60.0°
C05P06O09H10120.9°180.0°
C11C10C15C04177.9°180.0°
C11C10C15N16179.8°179.8°
C11C10C04C03178.5°179.9°
C11C10C04C053.2°0.0°
C10C11C12H5180.0°180.0°
C10C15N16C020.7°0.5°
C15C10C04C033.6°0.0°
C15C10C04C05179.0°180.0°
C15C10C11H4179.9°180.0°
C10C15C14H7179.7°180.0°
C10C15N16H8179.3°179.8°
N16C15C10C042.4°0.2°
C15N16C02H8180.0°179.7°
C15N16C02O01179.9°179.8°
C15N16C02C030.2°0.5°
N16C15C14H70.1°0.2°
C10C04C03C05175.5°179.9°
C10C04C03C023.3°0.1°
C10C04C03H1176.7°180.0°
C10C04C05H244.0°60.0°
C10C04C05H3163.1°60.0°
C04C10C11H42.4°0.1°
N16C02C03C041.5°0.4°
N16C02O01C03179.7°179.7°
N16C02C03H1178.5°179.8°
C04C03C02O01178.8°180.0°
C04C03C02H1180.0°179.9°
C03C04C05H2140.6°119.9°
C03C04C05H321.5°120.0°
C05C04C03C02178.7°180.0°
C05C04C03H11.3°0.1°
C04C05H2H3118.6°120.0°
O01C02C03H11.2°0.1°
O01C02N16H80.1°0.1°
C03C02N16H8179.8°179.7°
H4C11C12H50.0°0.1°
H5C12C13H60.3°0.1°
H6C13C14H70.5°0.1°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon