Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

KDT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAWCAXsing1.38Å1.39ÅAromatic
CAWCAVdoub1.38Å1.40ÅAromatic
CAXCBAdoub1.38Å1.38ÅAromatic
CBABRBBsing1.89Å1.95Å
CBACAZsing1.38Å1.39ÅAromatic
CAZCAYdoub1.38Å1.41ÅAromatic
CAYCAVsing1.38Å1.41ÅAromatic
CAVCATsing1.51Å1.42Å
CATNANsing1.46Å1.52Å
NANCAOsing1.38Å1.38Å
NANCAMsing1.35Å1.37Å
CAONAUsing1.38Å1.35Å
CAOCAFdoub1.37Å1.42Å
CAMOALdoub1.22Å1.23Å
CAMNADsing1.35Å1.42Å
NADCAEsing1.35Å1.41Å
CAEOAAdoub1.22Å1.24Å
CAECAFsing1.41Å1.41Å
CAFNAGsing1.41Å1.36Å
NAGCABsing1.47Å1.48Å
NAGSAHsing1.66Å1.57Å
SAHOAPdoub1.42Å1.51Å
SAHOACdoub1.42Å1.52Å
SAHCAIsing1.76Å1.78Å
CAICAJsing1.38Å1.40ÅAromatic
CAICAQdoub1.38Å1.38ÅAromatic
CAJCAKdoub1.38Å1.40ÅAromatic
CAKCASsing1.38Å1.38ÅAromatic
CASCARdoub1.38Å1.39ÅAromatic
CARCAQsing1.38Å1.39ÅAromatic
CAWHAWsing1.08Å1.08Å
CAXHAXsing1.08Å1.08Å
CAZHAZsing1.08Å1.08Å
CAYHAYsing1.08Å1.08Å
CATHAT1sing1.09Å1.10Å
CATHAT2sing1.09Å1.10Å
NAUHAU1sing0.97Å1.00Å
NAUHAU2sing0.97Å1.00Å
NADHADsing0.97Å1.00Å
CABHAB1sing1.09Å1.10Å
CABHAB2sing1.09Å1.10Å
CABHAB3sing1.09Å1.10Å
CAJHAJsing1.08Å1.08Å
CAQHAQsing1.08Å1.08Å
CAKHAKsing1.08Å1.08Å
CASHASsing1.08Å1.08Å
CARHARsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAXCAWCAV122.3°120.0°
CAWCAXCBA121.2°120.0°
CAXCAWHAW118.9°120.0°
CAWCAXHAX119.4°120.1°
CAWCAVCAY115.7°120.0°
CAWCAVCAT123.9°120.0°
CAVCAWHAW118.8°120.0°
CAXCBABRBB118.6°120.0°
CAXCBACAZ118.7°120.0°
CBACAXHAX119.4°120.0°
BRBBCBACAZ122.7°120.0°
CBACAZCAY119.8°120.0°
CBACAZHAZ120.1°120.0°
CAZCAYCAV122.2°120.0°
CAYCAZHAZ120.1°120.0°
CAZCAYHAY118.9°120.0°
CAYCAVCAT120.3°120.0°
CAVCAYHAY118.8°120.0°
CAVCATNAN116.7°109.5°
CAVCATHAT1107.6°109.5°
CAVCATHAT2107.6°109.4°
CATNANCAO121.6°119.8°
CATNANCAM118.5°119.8°
NANCATHAT1107.6°109.5°
NANCATHAT2107.6°109.5°
CAONANCAM119.8°120.4°
NANCAONAU122.4°120.4°
NANCAOCAF120.2°119.4°
NANCAMOAL120.6°119.5°
NANCAMNAD121.8°121.0°
NAUCAOCAF117.4°120.3°
CAONAUHAU1109.5°119.9°
CAONAUHAU2109.5°120.0°
CAOCAFCAE120.5°119.0°
CAOCAFNAG122.2°120.5°
OALCAMNAD117.6°119.5°
CAMNADCAE119.3°120.6°
CAMNADHAD120.3°119.7°
NADCAEOAA119.3°120.2°
NADCAECAF118.2°119.6°
CAENADHAD120.3°119.7°
OAACAECAF122.4°120.2°
CAECAFNAG117.2°120.5°
CAFNAGCAB117.6°120.0°
CAFNAGSAH120.4°120.0°
CABNAGSAH121.4°120.0°
NAGCABHAB1109.5°109.5°
NAGCABHAB2109.5°109.5°
NAGCABHAB3109.4°109.5°
NAGSAHOAP110.9°106.4°
NAGSAHOAC108.9°106.4°
NAGSAHCAI110.5°107.2°
OAPSAHOAC112.0°123.2°
OAPSAHCAI102.4°106.4°
OACSAHCAI112.0°106.4°
SAHCAICAJ120.0°120.0°
SAHCAICAQ120.6°120.0°
CAJCAICAQ119.3°120.0°
CAICAJCAK120.3°120.0°
CAICAJHAJ119.8°120.0°
CAICAQCAR120.0°120.0°
CAICAQHAQ120.0°120.0°
CAJCAKCAS120.3°120.0°
CAKCAJHAJ119.9°120.0°
CAJCAKHAK119.9°120.0°
CAKCASCAR118.8°120.0°
CASCAKHAK119.9°120.0°
CAKCASHAS120.6°120.0°
CASCARCAQ121.3°120.0°
CARCASHAS120.6°120.0°
CASCARHAR119.4°120.0°
CARCAQHAQ120.0°120.0°
CAQCARHAR119.4°120.0°
HAT1CATHAT2109.5°109.5°
HAU1NAUHAU2109.5°120.0°
HAB1CABHAB2109.5°109.5°
HAB1CABHAB3109.5°109.5°
HAB2CABHAB3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAXCAWCAVHAW180.0°179.7°
CAWCAXCBAHAX180.0°179.9°
CAWCAXCBABRBB179.5°180.0°
CAWCAXCBACAZ0.9°0.0°
CAXCAWCAVCAY0.9°0.0°
CAXCAWCAVCAT177.7°179.9°
CAVCAWCAXCBA0.9°0.1°
CAWCAVCAYCAZ0.9°0.0°
CAWCAVCAYCAT176.9°180.0°
CAWCAVCATNAN37.8°90.0°
CAVCAWCAXHAX179.1°180.0°
CAWCAVCAYHAY179.1°180.0°
CAWCAVCATHAT1158.9°150.0°
CAWCAVCATHAT283.2°30.0°
CAXCBABRBBCAZ179.6°180.0°
CAXCBACAZCAY0.9°0.0°
CBACAXCAWHAW179.0°179.7°
CAXCBACAZHAZ179.1°180.0°
BRBBCBACAZCAY179.5°179.9°
BRBBCBACAXHAX0.5°0.1°
BRBBCBACAZHAZ0.5°0.0°
CBACAZCAYHAZ180.0°179.9°
CBACAZCAYCAV0.9°0.1°
CAZCBACAXHAX179.1°180.0°
CBACAZCAYHAY179.1°180.0°
CAZCAYCAVHAY180.0°180.0°
CAZCAYCAVCAT177.8°180.0°
CAYCAVCATNAN145.5°90.0°
CAYCAVCAWHAW179.1°179.7°
CAVCAYCAZHAZ179.1°180.0°
CAYCAVCATHAT124.5°30.0°
CAYCAVCATHAT293.5°150.0°
CAVCATNANHAT1121.1°120.0°
CAVCATNANHAT2121.1°119.9°
CAVCATNANCAO97.3°90.0°
CAVCATNANCAM85.6°90.2°
CATCAVCAWHAW2.3°0.3°
CATCAVCAYHAY2.2°0.0°
CAVCATHAT1HAT2116.7°120.0°
CATNANCAOCAM177.0°179.8°
CATNANCAONAU0.9°0.1°
CATNANCAOCAF179.9°180.0°
CATNANCAMOAL0.7°0.0°
CATNANCAMNAD179.6°180.0°
NANCATHAT1HAT2116.7°120.0°
NANCAONAUCAF179.0°179.9°
CAONANCAMOAL177.8°179.8°
CAONANCAMNAD2.4°0.2°
NANCAOCAFCAE2.6°0.0°
NANCAOCAFNAG179.8°180.0°
CAONANCATHAT123.8°30.1°
CAONANCATHAT2141.6°150.1°
NANCAONAUHAU1180.0°6.3°
NANCAONAUHAU260.0°173.7°
CAMNANCAONAU177.9°179.7°
CAMNANCAOCAF3.1°0.2°
NANCAMOALNAD179.8°180.0°
NANCAMNADCAE1.2°0.0°
CAMNANCATHAT1153.3°149.7°
CAMNANCATHAT235.4°29.7°
NANCAMNADHAD178.8°180.0°
NAUCAOCAFCAE178.4°180.0°
NAUCAOCAFNAG0.8°0.0°
CAONAUHAU1HAU2120.0°179.9°
CAOCAFCAENAD1.3°0.3°
CAOCAFCAEOAA179.2°180.0°
CAOCAFCAENAG177.7°180.0°
CAOCAFNAGCAB102.1°48.4°
CAOCAFNAGSAH86.6°131.5°
CAFCAONAUHAU11.0°173.7°
CAFCAONAUHAU2119.0°6.4°
OALCAMNADCAE179.1°180.0°
OALCAMNADHAD0.9°0.0°
CAMNADCAEHAD180.0°179.9°
CAMNADCAEOAA178.5°180.0°
CAMNADCAECAF0.6°0.3°
NADCAEOAACAF177.9°179.7°
NADCAECAFNAG179.0°179.7°
OAACAECAFNAG3.1°0.0°
OAACAENADHAD1.5°0.0°
CAECAFNAGCAB75.5°131.6°
CAECAFNAGSAH95.7°48.5°
CAFCAENADHAD179.4°179.8°
CAFNAGCABSAH171.2°179.9°
CAFNAGSAHOAP53.3°136.1°
CAFNAGSAHOAC177.0°3.2°
CAFNAGSAHCAI59.5°110.3°
CAFNAGCABHAB1180.0°121.8°
CAFNAGCABHAB260.0°118.2°
CAFNAGCABHAB360.0°1.7°
CABNAGSAHOAP135.7°43.8°
CABNAGSAHOAC12.1°176.7°
CABNAGSAHCAI111.4°69.8°
NAGCABHAB1HAB2120.0°120.0°
NAGCABHAB1HAB3120.0°120.0°
NAGCABHAB2HAB3120.0°120.0°
NAGSAHOAPOAC121.9°123.0°
NAGSAHOAPCAI117.9°114.1°
NAGSAHOACCAI122.6°114.1°
NAGSAHCAICAJ80.3°90.0°
NAGSAHCAICAQ99.8°90.2°
SAHNAGCABHAB18.8°58.1°
SAHNAGCABHAB2128.8°61.8°
SAHNAGCABHAB3111.2°178.2°
OAPSAHOACCAI114.4°122.9°
OAPSAHCAICAJ37.9°23.6°
OAPSAHCAICAQ142.0°156.2°
OACSAHCAICAJ158.1°156.5°
OACSAHCAICAQ21.9°23.3°
SAHCAICAJCAQ179.9°179.8°
SAHCAICAJCAK179.5°180.0°
SAHCAICAQCAR179.6°179.8°
SAHCAICAJHAJ0.5°0.1°
SAHCAICAQHAQ0.4°0.0°
CAICAJCAKHAJ180.0°179.9°
CAICAJCAKCAS0.1°NaN°
CAJCAICAQCAR0.4°0.5°
CAJCAICAQHAQ179.6°179.8°
CAICAJCAKHAK179.9°180.0°
CAQCAICAJCAK0.4°0.2°
CAICAQCARCAS0.0°0.4°
CAICAQCARHAQ180.0°179.8°
CAQCAICAJHAJ179.6°179.7°
CAICAQCARHAR180.0°179.7°
CAJCAKCASHAK180.0°180.0°
CAJCAKCASCAR0.2°0.0°
CAJCAKCASHAS179.8°179.9°
CAKCASCARHAS180.0°180.0°
CAKCASCARCAQ0.3°0.2°
CASCAKCAJHAJ179.9°179.9°
CAKCASCARHAR179.7°179.9°
CASCARCAQHAR180.0°179.8°
CASCARCAQHAQ180.0°179.8°
CARCASCAKHAK179.8°180.0°
CAQCARCASHAS179.7°179.8°
HAWCAWCAXHAX1.0°0.4°
HAZCAZCAYHAY0.9°0.0°
HAB1CABHAB2HAB3120.0°120.0°
HAJCAJCAKHAK0.1°0.1°
HAQCAQCARHAR0.0°0.1°
HAKCAKCASHAS0.2°0.1°
HASCASCARHAR0.3°0.0°

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon