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KBG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O4C4sing1.43Å1.43Å
O4HO4sing0.97Å0.95Å
C4C3sing1.54Å1.50Å
C4C5sing1.53Å1.51Å
C4H4sing1.09Å1.10Å
C3O3sing1.43Å1.35Å
C3C2sing1.52Å1.51Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C2OAGdoub1.21Å1.23Å
C2C1sing1.51Å1.51Å
C1O1sing1.43Å1.45Å
C1O5sing1.43Å1.47Å
C1H1sing1.09Å1.10Å
O1HO1sing0.97Å0.95Å
O5C5sing1.43Å1.45Å
C5C6sing1.53Å1.53Å
C5H5sing1.09Å1.10Å
C6O6sing1.43Å1.42Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
O6HO6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4O4HO4109.5°106.8°
O4C4C3106.7°109.6°
O4C4C5111.8°109.6°
O4C4H4110.5°109.6°
C3C4C5111.5°108.7°
C3C4H4110.8°109.6°
C4C3O3105.6°109.9°
C4C3C2112.7°107.3°
C4C3H3109.6°110.0°
C5C4H4105.6°109.8°
C4C5O5105.4°110.0°
C4C5C6105.9°109.4°
C4C5H5115.6°109.4°
O3C3C2108.4°109.8°
O3C3H3113.8°109.9°
C3O3HO3109.5°106.8°
C2C3H3106.9°109.9°
C3C2OAG118.5°121.2°
C3C2C1118.3°117.6°
OAGC2C1123.3°121.2°
C2C1O1113.3°109.7°
C2C1O5108.9°108.9°
C2C1H1109.5°109.6°
O1C1O5115.3°109.6°
O1C1H1102.1°109.5°
C1O1HO1109.5°106.8°
O5C1H1107.2°109.6°
C1O5C5114.0°107.7°
O5C5C6113.3°109.4°
O5C5H5108.6°109.3°
C6C5H5108.2°109.4°
C5C6O6108.5°109.5°
C5C6H61109.8°109.5°
C5C6H62110.0°109.5°
O6C6H61109.8°109.4°
O6C6H62110.0°109.5°
C6O6HO6109.5°106.8°
H61C6H62108.7°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O4C4C3C5122.3°119.7°
O4C4C3H4120.4°120.3°
O4C4C5H4120.3°120.4°
O4C4C3O373.2°72.0°
O4C4C3C2168.6°168.6°
O4C4C3H349.8°49.1°
O4C4C5O5178.6°175.2°
O4C4C5C658.2°55.0°
O4C4C5H561.5°64.7°
HO4O4C4C3113.4°60.0°
HO4O4C4C58.7°179.2°
HO4O4C4H4126.0°60.3°
C3C4C5H4120.5°119.9°
C4C3O3C2121.0°117.9°
C4C3O3H3120.2°121.1°
C4C3C2H3120.4°119.5°
C4C3O3HO386.3°177.9°
C4C3C2OAG144.5°134.4°
C4C3C2C135.0°45.5°
C3C4C5O562.1°65.1°
C3C4C5C6177.5°174.8°
C3C4C5H557.8°55.0°
C5C4C3O3164.5°168.3°
C5C4C3C246.4°48.9°
C5C4C3H372.5°70.6°
C4C5O5C169.5°71.4°
C4C5O5C6115.3°120.1°
C4C5O5H5124.5°120.1°
C4C5C6H5124.5°119.8°
C4C5C6O667.2°174.8°
C4C5C6H61172.8°65.3°
C4C5C6H6253.2°54.7°
H4C4C3O347.2°48.3°
H4C4C3C271.0°71.1°
H4C4C3H3170.2°169.4°
H4C4C5O558.3°54.8°
H4C4C5C662.0°65.4°
H4C4C5H5178.3°174.9°
O3C3C2H3123.0°121.0°
O3C3C2OAG27.9°15.0°
O3C3C2C1151.5°165.0°
C2C3O3HO3152.7°60.0°
C3C2OAGC1179.4°180.0°
C3C2C1O1167.7°171.9°
C3C2C1O537.9°52.0°
C3C2C1H179.0°67.8°
H3C3O3HO334.0°61.0°
H3C3C2OAG95.1°106.0°
H3C3C2C185.4°74.0°
OAGC2C1O111.7°8.0°
OAGC2C1O5141.5°127.9°
OAGC2C1H1101.5°112.2°
C2C1O1O5126.5°119.5°
C2C1O1H1117.7°120.3°
C2C1O5H1118.4°119.8°
C2C1O1HO121.4°179.4°
C2C1O5C556.7°61.7°
O1C1O5H1112.9°120.2°
O1C1O5C5174.6°178.4°
O5C1O1HO1105.1°60.0°
C1O5C5C6175.2°168.5°
C1O5C5H555.0°48.7°
H1C1O1HO1139.0°60.3°
H1C1O5C561.7°58.2°
O5C5C6H5120.4°119.7°
O5C5C6O647.8°64.7°
O5C5C6H6172.1°55.3°
O5C5C6H62168.2°175.3°
C5C6O6H61120.0°120.0°
C5C6O6H62120.4°120.0°
C5C6H61H62120.4°120.0°
C5C6O6HO6176.1°180.0°
H5C5C6O6168.3°55.0°
H5C5C6H6148.3°175.0°
H5C5C6H6271.4°65.0°
O6C6H61H62120.3°120.0°
H61C6O6HO663.9°60.0°
H62C6O6HO655.7°60.0°

225946

PDB entries from 2024-10-09

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