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SummaryGeometryRelated PDB entries

K9T

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O56P53doub1.48Å1.60Å
O54P53sing1.61Å1.54Å
P53O58sing1.61Å1.57Å
P53O52sing1.61Å1.60Å
O52C49sing1.43Å1.44Å
C49C46sing1.53Å1.48Å
C46O45sing1.43Å1.43Å
O45C44sing1.36Å1.37Å
C42C44doub1.38Å1.37ÅAromatic
C42C41sing1.40Å1.42ÅAromatic
C44C17sing1.40Å1.41ÅAromatic
O15S14doub1.42Å1.44Å
N40C41doub1.34Å1.38ÅAromatic
N40C38sing1.31Å1.32ÅAromatic
C41C20sing1.42Å1.41ÅAromatic
C06C05sing1.53Å1.53Å
C17S14sing1.76Å1.78Å
C17C18doub1.36Å1.37ÅAromatic
S14C05sing1.81Å1.82Å
S14O16doub1.42Å1.44Å
C38N37doub1.32Å1.34ÅAromatic
C05C10sing1.53Å1.52Å
C05C01sing1.53Å1.54Å
C20C18sing1.40Å1.41ÅAromatic
C20C21doub1.41Å1.44ÅAromatic
N37C21sing1.33Å1.35ÅAromatic
C21N22sing1.38Å1.36Å
N22C24sing1.40Å1.42Å
C25C24doub1.39Å1.40ÅAromatic
C25C27sing1.38Å1.39ÅAromatic
C24C35sing1.38Å1.40ÅAromatic
C27C29doub1.39Å1.39ÅAromatic
C35C34doub1.41Å1.40ÅAromatic
C29C34sing1.40Å1.40ÅAromatic
C29S30sing1.76Å1.73ÅAromatic
C34N33sing1.35Å1.40ÅAromatic
S30C31sing1.71Å1.73ÅAromatic
N33C31doub1.28Å1.29ÅAromatic
C10H1sing1.09Å1.10Å
C10H2sing1.09Å1.10Å
C10H3sing1.09Å1.10Å
C01H4sing1.09Å1.10Å
C01H5sing1.09Å1.10Å
C01H6sing1.09Å1.10Å
C06H7sing1.09Å1.10Å
C06H8sing1.09Å1.10Å
C06H9sing1.09Å1.10Å
C18H10sing1.08Å1.08Å
N22H11sing0.97Å1.00Å
C25H12sing1.08Å1.08Å
C27H13sing1.08Å1.08Å
C31H14sing1.08Å1.08Å
C35H15sing1.08Å1.08Å
C38H16sing1.08Å1.08Å
C42H17sing1.08Å1.08Å
C46H18sing1.09Å1.10Å
C46H19sing1.09Å1.10Å
C49H20sing1.09Å1.10Å
C49H21sing1.09Å1.10Å
O54H22sing0.97Å0.95Å
O58H23sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O56P53O54112.6°109.5°
O56P53O58108.0°109.5°
O56P53O52109.2°109.4°
O54P53O58115.0°109.5°
O54P53O52107.8°109.4°
P53O54H22109.5°114.0°
O58P53O52103.8°109.5°
P53O58H23109.5°114.0°
P53O52C49118.1°123.0°
O52C49C46108.4°109.5°
O52C49H20109.8°109.5°
O52C49H21109.8°109.5°
C49C46O45106.0°109.5°
C49C46H18110.3°109.5°
C49C46H19110.3°109.5°
C46C49H20109.8°109.4°
C46C49H21109.7°109.4°
C46O45C44119.1°117.0°
O45C46H18110.3°109.4°
O45C46H19110.3°109.4°
O45C44C42124.3°119.6°
O45C44C17115.5°119.6°
C44C42C41120.6°119.4°
C42C44C17120.0°120.8°
C44C42H17119.7°120.3°
C42C41N40118.1°121.9°
C42C41C20119.4°119.4°
C41C42H17119.7°120.3°
C44C17S14124.7°119.6°
C44C17C18120.1°120.8°
O15S14C17107.4°104.3°
O15S14C05107.8°110.6°
O15S14O16119.2°121.1°
C41N40C38115.3°120.5°
N40C41C20122.5°118.7°
N40C38N37128.3°122.9°
N40C38H16115.8°118.6°
C41C20C18119.1°119.9°
C41C20C21115.4°118.1°
C06C05S14107.7°109.5°
C06C05C10111.1°109.5°
C06C05C01111.2°109.5°
C05C06H7109.5°109.5°
C05C06H8109.5°109.5°
C05C06H9109.4°109.5°
S14C17C18114.4°119.6°
C17S14C05108.5°104.5°
C17S14O16105.8°104.2°
C17C18C20120.6°119.8°
C17C18H10119.7°120.1°
C05S14O16107.8°110.5°
S14C05C10105.7°109.5°
S14C05C01110.0°109.5°
C38N37C21116.8°121.5°
N37C38H16115.8°118.6°
C10C05C01111.0°109.4°
C05C10H1109.5°109.4°
C05C10H2109.5°109.5°
C05C10H3109.5°109.4°
C05C01H4109.5°109.5°
C05C01H5109.5°109.4°
C05C01H6109.5°109.4°
C18C20C21125.4°122.0°
C20C18H10119.7°120.1°
C20C21N37121.5°118.2°
C20C21N22119.8°120.9°
N37C21N22118.5°120.9°
C21N22C24125.0°120.0°
C21N22H11117.5°120.0°
N22C24C25119.9°119.8°
N22C24C35119.9°119.8°
C24N22H11117.5°120.0°
C24C25C27120.6°120.0°
C25C24C35119.9°120.4°
C24C25H12119.7°120.0°
C25C27C29118.9°120.2°
C27C25H12119.7°120.0°
C25C27H13120.5°119.9°
C24C35C34120.3°120.3°
C24C35H15119.9°119.8°
C27C29C34121.6°120.5°
C27C29S30129.0°131.6°
C29C27H13120.5°119.9°
C35C34C29118.5°118.6°
C35C34N33126.8°129.5°
C34C35H15119.8°119.9°
C34C29S30109.3°108.0°
C29C34N33114.7°111.9°
C29S30C3188.8°90.8°
C34N33C31110.0°117.8°
S30C31N33117.1°111.5°
S30C31H14121.4°124.3°
N33C31H14121.4°124.2°
H1C10H2109.5°109.5°
H1C10H3109.5°109.6°
H2C10H3109.4°109.5°
H4C01H5109.5°109.5°
H4C01H6109.5°109.5°
H5C01H6109.4°109.5°
H7C06H8109.5°109.5°
H7C06H9109.5°109.4°
H8C06H9109.5°109.5°
H18C46H19109.5°109.5°
H20C49H21109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O56P53O54O58124.3°120.1°
O56P53O54O52120.5°119.9°
O56P53O58O52115.8°120.0°
O56P53O52C4961.5°55.1°
O56P53O54H220.0°60.0°
O56P53O58H230.0°180.0°
O54P53O58O52117.5°120.0°
O54P53O52C4961.1°175.0°
O54P53O58H23126.7°59.9°
O58P53O52C49176.5°64.9°
O58P53O54H22124.3°60.1°
P53O52C49C46154.8°180.0°
P53O52C49H2034.9°60.1°
P53O52C49H2185.4°60.0°
O52P53O54H22120.5°179.9°
O52P53O58H23115.8°60.0°
O52C49C46H20119.8°120.0°
O52C49C46H21119.8°120.1°
O52C49C46O4587.4°65.0°
O52C49C46H1832.0°55.0°
O52C49C46H19153.1°175.0°
O52C49H20H21120.5°120.1°
C49C46O45H18119.4°120.0°
C49C46O45H19119.4°120.0°
C49C46O45C44128.0°180.0°
C49C46H18H19121.6°120.1°
C46C49H20H21120.5°119.9°
C46O45C44C420.6°0.0°
C46O45C44C17175.3°179.9°
O45C46H18H19121.6°120.0°
O45C46C49H20152.7°175.0°
O45C46C49H2132.4°55.1°
O45C44C42C17175.8°179.9°
O45C44C42C41179.7°180.0°
O45C44C17S149.5°0.1°
O45C44C17C18178.4°179.7°
O45C44C42H170.3°0.1°
C44O45C46H18112.6°60.0°
C44O45C46H198.5°60.0°
C44C42C41H17180.0°179.9°
C44C42C41N40179.9°180.0°
C44C42C41C201.6°0.3°
C42C44C17S14174.4°180.0°
C42C44C17C185.5°0.2°
C41C42C44C174.0°0.1°
C42C41N40C20178.3°179.6°
C42C41N40C38176.1°179.7°
C42C41C20C180.6°0.3°
C42C41C20C21176.2°179.7°
C44C17S14O1526.1°11.4°
C44C17S14C18169.4°179.8°
C44C17S14C0590.2°104.7°
C44C17S14O16154.4°139.3°
C44C17C18C204.5°0.2°
C44C17C18H10175.5°179.8°
C17C44C42H17176.0°180.0°
O15S14C05C0653.9°62.8°
O15S14C17C05116.2°116.1°
O15S14C17O16128.4°127.9°
O15S14C17C18143.4°168.4°
O15S14C05O16129.9°136.8°
O15S14C05C1064.9°57.2°
O15S14C05C01175.3°177.2°
C41N40C38N373.0°0.0°
N40C41C20C18178.9°179.9°
N40C41C20C212.1°0.0°
C41N40C38H16177.0°180.0°
N40C41C42H170.1°0.1°
C38N40C41C202.1°0.0°
N40C38N37H16180.0°180.0°
N40C38N37C213.7°0.0°
C41C20C18C172.1°0.0°
C41C20C18C21176.5°179.9°
C41C20C21N372.7°0.0°
C41C20C21N22177.7°180.0°
C41C20C18H10177.9°180.0°
C20C41C42H17178.4°179.7°
C06C05S14C1762.1°174.4°
C06C05S14C10118.8°120.0°
C06C05S14C01121.3°120.0°
C06C05S14O16176.2°74.0°
C06C05C10C01124.2°120.0°
C06C05C10H1180.0°174.8°
C06C05C10H260.0°65.2°
C06C05C10H360.0°54.7°
C06C05C01H4180.0°60.0°
C06C05C01H560.0°60.0°
C06C05C01H660.0°180.0°
C05C06H7H8120.0°120.0°
C05C06H7H9120.0°120.0°
C05C06H8H9120.0°120.0°
C17S14C05O16114.1°111.6°
C17S14C05C10179.1°54.5°
C17S14C05C0159.2°65.5°
S14C17C18C20174.5°180.0°
S14C17C18H105.5°0.0°
C18C17S14C05100.4°75.5°
C18C17S14O1615.0°40.5°
C17C18C20H10180.0°180.0°
C17C18C20C21174.3°179.9°
S14C05C10C01119.3°120.0°
S14C05C10H163.5°65.2°
S14C05C10H256.5°54.7°
S14C05C10H3176.5°174.7°
S14C05C01H460.8°180.0°
S14C05C01H5179.2°60.0°
S14C05C01H659.2°60.0°
S14C05C06H7180.0°60.0°
S14C05C06H860.0°60.0°
S14C05C06H960.0°180.0°
O16S14C05C1065.0°166.0°
O16S14C05C0154.9°46.0°
C38N37C21C203.3°0.1°
C38N37C21N22178.4°179.9°
C05C10H1H2120.0°120.0°
C05C10H1H3120.0°120.0°
C05C10H2H3120.0°119.9°
C10C05C01H455.9°60.0°
C10C05C01H564.2°180.0°
C10C05C01H6175.9°60.0°
C10C05C06H764.7°60.0°
C10C05C06H855.3°180.0°
C10C05C06H9175.3°60.0°
C01C05C10H155.8°54.8°
C01C05C10H2175.8°174.8°
C01C05C10H364.2°65.3°
C05C01H4H5120.0°120.0°
C05C01H4H6120.0°120.0°
C05C01H5H6120.0°119.9°
C01C05C06H759.4°179.9°
C01C05C06H8179.4°60.0°
C01C05C06H960.6°60.0°
C18C20C21N37179.2°180.0°
C18C20C21N225.7°0.0°
C20C21N37N22175.1°180.0°
C20C21N22C24169.2°174.5°
C21C20C18H105.7°0.1°
C20C21N22H1110.8°5.5°
N37C21N22C245.9°5.5°
N37C21N22H11174.0°174.5°
C21N37C38H16176.3°180.0°
C21N22C24H11180.0°179.9°
C21N22C24C2550.2°33.0°
C21N22C24C35123.3°147.3°
N22C24C25C35173.5°179.7°
N22C24C25C27174.9°179.7°
N22C24C35C34175.2°179.8°
N22C24C25H125.1°0.3°
N22C24C35H154.8°0.0°
C24C25C27H12180.0°180.0°
C24C25C27C291.3°0.0°
C25C24C35C341.7°0.0°
C25C24N22H11129.8°147.0°
C24C25C27H13178.7°180.0°
C25C24C35H15178.3°179.7°
C27C25C24C351.4°0.0°
C25C27C29H13180.0°179.9°
C25C27C29C343.7°0.0°
C25C27C29S30179.5°179.9°
C24C35C34H15180.0°179.7°
C24C35C34C290.7°0.0°
C24C35C34N33178.3°180.0°
C35C24N22H1156.7°32.8°
C35C24C25H12178.6°180.0°
C27C29C34C353.4°0.0°
C27C29C34S30176.5°180.0°
C27C29C34N33175.7°180.0°
C27C29S30C31174.7°180.0°
C29C27C25H12178.7°180.0°
C35C34C29N33179.1°180.0°
C35C34C29S30179.9°180.0°
C35C34N33C31178.4°180.0°
C34C29S30C311.5°0.0°
C29C34N33C310.6°0.0°
C34C29C27H13176.2°180.0°
C29C34C35H15179.3°179.7°
S30C29C34N330.9°0.0°
C29S30C31N332.0°0.0°
S30C29C27H130.5°0.0°
C29S30C31H14178.0°180.0°
C34N33C31S301.9°0.0°
C34N33C31H14178.2°180.0°
N33C34C35H151.7°0.3°
S30C31N33H14180.0°179.9°
H1C10H2H3120.0°120.1°
H4C01H5H6120.0°120.0°
H7C06H8H9120.0°120.0°
H12C25C27H131.3°0.0°
H18C46C49H2087.8°65.1°
H18C46C49H21151.8°175.0°
H19C46C49H2033.3°55.0°
H19C46C49H2187.0°64.9°

222415

PDB entries from 2024-07-10

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