K12
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | O5' | sing | 1.61Å | 1.59Å | |
| P | OP1 | doub | 1.48Å | 1.48Å | |
| P | OP2 | sing | 1.61Å | 1.49Å | |
| C1 | C2 | sing | 1.53Å | 1.55Å | |
| C1 | O5' | sing | 1.43Å | 1.43Å | |
| C1 | H1 | sing | 1.09Å | 1.10Å | |
| C1 | H1A | sing | 1.09Å | 1.10Å | |
| C2 | C3 | sing | 1.53Å | 1.55Å | |
| C2 | H2 | sing | 1.09Å | 1.10Å | |
| C2 | H2A | sing | 1.09Å | 1.10Å | |
| C3 | C4 | sing | 1.53Å | 1.54Å | |
| C3 | H3 | sing | 1.09Å | 1.10Å | |
| C3 | H3A | sing | 1.09Å | 1.10Å | |
| C4 | C5 | sing | 1.53Å | 1.55Å | |
| C4 | H4 | sing | 1.09Å | 1.10Å | |
| C4 | H4A | sing | 1.09Å | 1.10Å | |
| C5 | C6 | sing | 1.53Å | 1.55Å | |
| C5 | H5 | sing | 1.09Å | 1.10Å | |
| C5 | H5A | sing | 1.09Å | 1.10Å | |
| C6 | C7 | sing | 1.53Å | 1.56Å | |
| C6 | H6 | sing | 1.09Å | 1.10Å | |
| C6 | H6A | sing | 1.09Å | 1.10Å | |
| C7 | C8 | sing | 1.53Å | 1.55Å | |
| C7 | H7 | sing | 1.09Å | 1.10Å | |
| C7 | H7A | sing | 1.09Å | 1.10Å | |
| C8 | C9 | sing | 1.53Å | 1.55Å | |
| C8 | H8 | sing | 1.09Å | 1.10Å | |
| C8 | H8A | sing | 1.09Å | 1.10Å | |
| C9 | C10 | sing | 1.53Å | 1.55Å | |
| C9 | H9 | sing | 1.09Å | 1.10Å | |
| C9 | H9A | sing | 1.09Å | 1.10Å | |
| C10 | C11 | sing | 1.53Å | 1.54Å | |
| C10 | H10 | sing | 1.09Å | 1.10Å | |
| C10 | H10A | sing | 1.09Å | 1.10Å | |
| C11 | C12 | sing | 1.53Å | 1.54Å | |
| C11 | H11 | sing | 1.09Å | 1.10Å | |
| C11 | H11A | sing | 1.09Å | 1.10Å | |
| C12 | O3' | sing | 1.43Å | 1.43Å | |
| C12 | H12 | sing | 1.09Å | 1.10Å | |
| C12 | H12A | sing | 1.09Å | 1.10Å | |
| P | OP3 | sing | 1.61Å | 1.72Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O5' | P | OP1 | 108.2° | 109.5° |
| O5' | P | OP2 | 108.3° | 109.5° |
| P | O5' | C1 | 120.9° | 123.0° |
| O5' | P | OP3 | 110.0° | 109.5° |
| OP1 | P | OP2 | 119.6° | 109.5° |
| OP1 | P | OP3 | 101.5° | 109.4° |
| OP2 | P | OP3 | 108.9° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| C2 | C1 | O5' | 110.9° | 109.5° |
| C2 | C1 | H1 | 109.0° | 109.5° |
| C2 | C1 | H1A | 109.0° | 109.4° |
| C1 | C2 | C3 | 115.9° | 109.5° |
| C1 | C2 | H2 | 107.4° | 109.5° |
| C1 | C2 | H2A | 107.3° | 109.5° |
| O5' | C1 | H1 | 109.0° | 109.5° |
| O5' | C1 | H1A | 109.0° | 109.5° |
| H1 | C1 | H1A | 109.9° | 109.5° |
| C3 | C2 | H2 | 107.4° | 109.4° |
| C3 | C2 | H2A | 107.4° | 109.5° |
| C2 | C3 | C4 | 115.7° | 109.4° |
| C2 | C3 | H3 | 107.4° | 109.4° |
| C2 | C3 | H3A | 107.4° | 109.5° |
| H2 | C2 | H2A | 111.5° | 109.5° |
| C4 | C3 | H3 | 107.4° | 109.5° |
| C4 | C3 | H3A | 107.4° | 109.5° |
| C3 | C4 | C5 | 115.8° | 109.4° |
| C3 | C4 | H4 | 107.4° | 109.5° |
| C3 | C4 | H4A | 107.4° | 109.5° |
| H3 | C3 | H3A | 111.4° | 109.5° |
| C5 | C4 | H4 | 107.4° | 109.4° |
| C5 | C4 | H4A | 107.4° | 109.5° |
| C4 | C5 | C6 | 116.0° | 109.5° |
| C4 | C5 | H5 | 107.3° | 109.4° |
| C4 | C5 | H5A | 107.4° | 109.5° |
| H4 | C4 | H4A | 111.4° | 109.5° |
| C6 | C5 | H5 | 107.3° | 109.5° |
| C6 | C5 | H5A | 107.3° | 109.5° |
| C5 | C6 | C7 | 116.0° | 109.4° |
| C5 | C6 | H6 | 107.3° | 109.4° |
| C5 | C6 | H6A | 107.3° | 109.5° |
| H5 | C5 | H5A | 111.5° | 109.5° |
| C7 | C6 | H6 | 107.3° | 109.5° |
| C7 | C6 | H6A | 107.3° | 109.5° |
| C6 | C7 | C8 | 115.9° | 109.4° |
| C6 | C7 | H7 | 107.4° | 109.5° |
| C6 | C7 | H7A | 107.4° | 109.5° |
| H6 | C6 | H6A | 111.5° | 109.5° |
| C8 | C7 | H7 | 107.4° | 109.4° |
| C8 | C7 | H7A | 107.4° | 109.5° |
| C7 | C8 | C9 | 115.8° | 109.5° |
| C7 | C8 | H8 | 107.4° | 109.5° |
| C7 | C8 | H8A | 107.4° | 109.5° |
| H7 | C7 | H7A | 111.5° | 109.5° |
| C9 | C8 | H8 | 107.4° | 109.4° |
| C9 | C8 | H8A | 107.4° | 109.5° |
| C8 | C9 | C10 | 116.0° | 109.5° |
| C8 | C9 | H9 | 107.3° | 109.4° |
| C8 | C9 | H9A | 107.3° | 109.5° |
| H8 | C8 | H8A | 111.4° | 109.4° |
| C10 | C9 | H9 | 107.3° | 109.5° |
| C10 | C9 | H9A | 107.4° | 109.5° |
| C9 | C10 | C11 | 115.8° | 109.5° |
| C9 | C10 | H10 | 107.4° | 109.5° |
| C9 | C10 | H10A | 107.4° | 109.5° |
| H9 | C9 | H9A | 111.5° | 109.4° |
| C11 | C10 | H10 | 107.4° | 109.4° |
| C11 | C10 | H10A | 107.4° | 109.5° |
| C10 | C11 | C12 | 115.7° | 109.5° |
| C10 | C11 | H11 | 107.5° | 109.4° |
| C10 | C11 | H11A | 107.5° | 109.5° |
| H10 | C10 | H10A | 111.4° | 109.5° |
| C12 | C11 | H11 | 107.5° | 109.5° |
| C12 | C11 | H11A | 107.5° | 109.4° |
| C11 | C12 | O3' | 110.7° | 109.5° |
| C11 | C12 | H12 | 109.0° | 109.4° |
| C11 | C12 | H12A | 109.0° | 109.5° |
| H11 | C11 | H11A | 111.4° | 109.5° |
| O3' | C12 | H12 | 109.0° | 109.5° |
| O3' | C12 | H12A | 109.0° | 109.5° |
| C12 | O3' | HO3' | 109.5° | 113.9° |
| H12 | C12 | H12A | 109.9° | 109.4° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O5' | P | OP1 | OP2 | 124.5° | 120.0° |
| O5' | P | OP1 | OP3 | 115.7° | 120.0° |
| O5' | P | OP2 | OP3 | 119.6° | 120.0° |
| P | O5' | C1 | C2 | 178.6° | 180.0° |
| P | O5' | C1 | H1 | 58.6° | 60.0° |
| P | O5' | C1 | H1A | 61.4° | 60.1° |
| O5' | P | OP2 | HOP2 | 124.4° | 60.0° |
| O5' | P | OP3 | HOP3 | 114.4° | 180.0° |
| OP1 | P | OP2 | OP3 | 115.9° | 120.0° |
| OP1 | P | O5' | C1 | 34.2° | 55.0° |
| OP1 | P | OP2 | HOP2 | 0.0° | 180.0° |
| OP1 | P | OP3 | HOP3 | 0.0° | 60.1° |
| OP2 | P | O5' | C1 | 165.2° | 65.0° |
| OP2 | P | OP3 | HOP3 | 127.0° | 59.9° |
| C2 | C1 | O5' | H1 | 120.0° | 120.0° |
| C2 | C1 | O5' | H1A | 120.0° | 119.9° |
| C2 | C1 | H1 | H1A | 119.4° | 119.9° |
| C1 | C2 | C3 | H2 | 120.0° | 120.0° |
| C1 | C2 | C3 | H2A | 120.0° | 120.1° |
| C1 | C2 | H2 | H2A | 117.3° | 120.0° |
| C1 | C2 | C3 | C4 | 75.4° | 180.0° |
| C1 | C2 | C3 | H3 | 164.7° | 60.0° |
| C1 | C2 | C3 | H3A | 44.7° | 59.9° |
| O5' | C1 | H1 | H1A | 119.4° | 120.0° |
| O5' | C1 | C2 | C3 | 32.8° | 180.0° |
| O5' | C1 | C2 | H2 | 87.1° | 60.1° |
| O5' | C1 | C2 | H2A | 152.8° | 60.0° |
| C1 | O5' | P | OP3 | 75.9° | 174.9° |
| H1 | C1 | C2 | C3 | 87.1° | 59.9° |
| H1 | C1 | C2 | H2 | 152.9° | 60.0° |
| H1 | C1 | C2 | H2A | 32.8° | 180.0° |
| H1A | C1 | C2 | C3 | 152.8° | 60.0° |
| H1A | C1 | C2 | H2 | 32.9° | 180.0° |
| H1A | C1 | C2 | H2A | 87.2° | 60.0° |
| C3 | C2 | H2 | H2A | 117.4° | 120.0° |
| C2 | C3 | C4 | H3 | 120.0° | 120.0° |
| C2 | C3 | C4 | H3A | 120.0° | 120.0° |
| C2 | C3 | H3 | H3A | 117.4° | 120.0° |
| C2 | C3 | C4 | C5 | 170.2° | NaN° |
| C2 | C3 | C4 | H4 | 50.2° | 60.0° |
| C2 | C3 | C4 | H4A | 69.8° | 60.0° |
| H2 | C2 | C3 | C4 | 44.6° | 60.0° |
| H2 | C2 | C3 | H3 | 75.4° | 180.0° |
| H2 | C2 | C3 | H3A | 164.6° | 60.0° |
| H2A | C2 | C3 | C4 | 164.7° | 59.9° |
| H2A | C2 | C3 | H3 | 44.7° | 60.0° |
| H2A | C2 | C3 | H3A | 75.3° | 180.0° |
| C4 | C3 | H3 | H3A | 117.4° | 120.1° |
| C3 | C4 | C5 | H4 | 120.0° | 120.0° |
| C3 | C4 | C5 | H4A | 120.0° | 120.1° |
| C3 | C4 | H4 | H4A | 117.4° | 120.1° |
| C3 | C4 | C5 | C6 | 64.5° | 180.0° |
| C3 | C4 | C5 | H5 | 55.5° | 60.0° |
| C3 | C4 | C5 | H5A | 175.5° | 60.0° |
| H3 | C3 | C4 | C5 | 69.9° | 60.0° |
| H3 | C3 | C4 | H4 | 170.1° | 180.0° |
| H3 | C3 | C4 | H4A | 50.2° | 60.0° |
| H3A | C3 | C4 | C5 | 50.1° | 60.0° |
| H3A | C3 | C4 | H4 | 69.9° | 60.0° |
| H3A | C3 | C4 | H4A | 170.2° | 180.0° |
| C5 | C4 | H4 | H4A | 117.4° | 120.0° |
| C4 | C5 | C6 | H5 | 120.0° | 120.0° |
| C4 | C5 | C6 | H5A | 120.0° | 120.1° |
| C4 | C5 | H5 | H5A | 117.3° | 120.0° |
| C4 | C5 | C6 | C7 | 64.5° | 180.0° |
| C4 | C5 | C6 | H6 | 55.5° | 60.0° |
| C4 | C5 | C6 | H6A | 175.5° | 59.9° |
| H4 | C4 | C5 | C6 | 175.5° | 60.0° |
| H4 | C4 | C5 | H5 | 64.5° | 180.0° |
| H4 | C4 | C5 | H5A | 55.5° | 60.0° |
| H4A | C4 | C5 | C6 | 55.6° | 59.9° |
| H4A | C4 | C5 | H5 | 175.6° | 60.0° |
| H4A | C4 | C5 | H5A | 64.4° | 180.0° |
| C6 | C5 | H5 | H5A | 117.3° | 120.0° |
| C5 | C6 | C7 | H6 | 120.0° | 119.9° |
| C5 | C6 | C7 | H6A | 120.0° | 120.0° |
| C5 | C6 | H6 | H6A | 117.3° | 120.0° |
| C5 | C6 | C7 | C8 | 108.8° | 180.0° |
| C5 | C6 | C7 | H7 | 131.2° | 60.1° |
| C5 | C6 | C7 | H7A | 11.2° | 60.0° |
| H5 | C5 | C6 | C7 | 175.5° | 60.0° |
| H5 | C5 | C6 | H6 | 64.5° | 180.0° |
| H5 | C5 | C6 | H6A | 55.5° | 60.0° |
| H5A | C5 | C6 | C7 | 55.5° | 59.9° |
| H5A | C5 | C6 | H6 | 175.5° | 60.0° |
| H5A | C5 | C6 | H6A | 64.5° | 180.0° |
| C7 | C6 | H6 | H6A | 117.3° | 120.1° |
| C6 | C7 | C8 | H7 | 120.0° | 120.0° |
| C6 | C7 | C8 | H7A | 120.0° | 120.1° |
| C6 | C7 | H7 | H7A | 117.4° | 120.1° |
| C6 | C7 | C8 | C9 | 73.6° | 180.0° |
| C6 | C7 | C8 | H8 | 166.5° | 60.0° |
| C6 | C7 | C8 | H8A | 46.4° | 60.0° |
| H6 | C6 | C7 | C8 | 11.2° | 60.1° |
| H6 | C6 | C7 | H7 | 108.8° | 180.0° |
| H6 | C6 | C7 | H7A | 131.2° | 60.0° |
| H6A | C6 | C7 | C8 | 131.2° | 60.0° |
| H6A | C6 | C7 | H7 | 11.2° | 60.0° |
| H6A | C6 | C7 | H7A | 108.8° | 180.0° |
| C8 | C7 | H7 | H7A | 117.4° | 120.0° |
| C7 | C8 | C9 | H8 | 120.0° | 120.0° |
| C7 | C8 | C9 | H8A | 120.0° | 120.1° |
| C7 | C8 | H8 | H8A | 117.4° | 120.0° |
| C7 | C8 | C9 | C10 | 73.9° | 180.0° |
| C7 | C8 | C9 | H9 | 166.1° | 60.0° |
| C7 | C8 | C9 | H9A | 46.1° | 59.9° |
| H7 | C7 | C8 | C9 | 46.4° | 60.0° |
| H7 | C7 | C8 | H8 | 73.6° | 180.0° |
| H7 | C7 | C8 | H8A | 166.4° | 60.0° |
| H7A | C7 | C8 | C9 | 166.4° | 59.9° |
| H7A | C7 | C8 | H8 | 46.4° | 60.1° |
| H7A | C7 | C8 | H8A | 73.6° | 180.0° |
| C9 | C8 | H8 | H8A | 117.4° | 120.0° |
| C8 | C9 | C10 | H9 | 120.0° | 120.0° |
| C8 | C9 | C10 | H9A | 120.0° | 120.0° |
| C8 | C9 | H9 | H9A | 117.3° | 120.0° |
| C8 | C9 | C10 | C11 | 70.3° | 180.0° |
| C8 | C9 | C10 | H10 | 169.6° | 60.0° |
| C8 | C9 | C10 | H10A | 49.7° | 60.0° |
| H8 | C8 | C9 | C10 | 46.1° | 60.0° |
| H8 | C8 | C9 | H9 | 73.9° | 180.0° |
| H8 | C8 | C9 | H9A | 166.1° | 60.1° |
| H8A | C8 | C9 | C10 | 166.1° | 59.9° |
| H8A | C8 | C9 | H9 | 46.1° | 60.1° |
| H8A | C8 | C9 | H9A | 73.9° | NaN° |
| C10 | C9 | H9 | H9A | 117.3° | 120.0° |
| C9 | C10 | C11 | H10 | 120.0° | 120.0° |
| C9 | C10 | C11 | H10A | 120.0° | 120.1° |
| C9 | C10 | H10 | H10A | 117.4° | 120.0° |
| C9 | C10 | C11 | C12 | 179.7° | 180.0° |
| C9 | C10 | C11 | H11 | 60.3° | 60.0° |
| C9 | C10 | C11 | H11A | 59.7° | 60.0° |
| H9 | C9 | C10 | C11 | 49.7° | 60.0° |
| H9 | C9 | C10 | H10 | 70.4° | 180.0° |
| H9 | C9 | C10 | H10A | 169.6° | 60.0° |
| H9A | C9 | C10 | C11 | 169.7° | 60.0° |
| H9A | C9 | C10 | H10 | 49.7° | 60.0° |
| H9A | C9 | C10 | H10A | 70.3° | 180.0° |
| C11 | C10 | H10 | H10A | 117.4° | 120.0° |
| C10 | C11 | C12 | H11 | 120.0° | 120.0° |
| C10 | C11 | C12 | H11A | 120.0° | 120.0° |
| C10 | C11 | H11 | H11A | 117.5° | 120.0° |
| C10 | C11 | C12 | O3' | 73.1° | 180.0° |
| C10 | C11 | C12 | H12 | 46.9° | 60.0° |
| C10 | C11 | C12 | H12A | 166.9° | 59.9° |
| H10 | C10 | C11 | C12 | 59.7° | 60.0° |
| H10 | C10 | C11 | H11 | 179.7° | 180.0° |
| H10 | C10 | C11 | H11A | 60.3° | 60.0° |
| H10A | C10 | C11 | C12 | 60.3° | 59.9° |
| H10A | C10 | C11 | H11 | 59.7° | 60.0° |
| H10A | C10 | C11 | H11A | 179.7° | 179.9° |
| C12 | C11 | H11 | H11A | 117.4° | 120.0° |
| C11 | C12 | O3' | H12 | 120.0° | 120.0° |
| C11 | C12 | O3' | H12A | 120.0° | 120.0° |
| C11 | C12 | H12 | H12A | 119.5° | 119.9° |
| C11 | C12 | O3' | HO3' | 180.0° | 180.0° |
| H11 | C11 | C12 | O3' | 166.9° | 60.1° |
| H11 | C11 | C12 | H12 | 73.1° | 179.9° |
| H11 | C11 | C12 | H12A | 46.9° | 60.0° |
| H11A | C11 | C12 | O3' | 46.9° | 60.0° |
| H11A | C11 | C12 | H12 | 166.9° | 60.0° |
| H11A | C11 | C12 | H12A | 73.1° | 180.0° |
| O3' | C12 | H12 | H12A | 119.5° | 120.1° |
| H12 | C12 | O3' | HO3' | 60.0° | 60.1° |
| H12A | C12 | O3' | HO3' | 60.0° | 59.9° |
| OP3 | P | OP2 | HOP2 | 115.9° | 60.0° |
