Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

JYY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C12C13sing1.53Å1.50Å
C12C21sing1.53Å1.32Å
C12C11sing1.53Å1.51Å
C13C14sing1.53Å1.52Å
C14N32sing1.47Å1.47Å
C15C01sing1.48Å1.52Å
C15C16doub1.36Å1.44ÅAromatic
C15N33sing1.32Å1.56ÅAromatic
C17C18sing1.47Å1.53Å
C17N33doub1.30Å1.41ÅAromatic
C17S41sing1.76Å1.54ÅAromatic
C18N34sing1.35Å1.45Å
C18O39doub1.22Å1.18Å
C19C20sing1.53Å1.53Å
C19N34sing1.47Å1.45Å
C20O38sing1.43Å1.40Å
C21C22sing1.51Å1.53Å
C21C28sing1.47Å1.52Å
C22C23doub1.38Å1.53ÅAromatic
C22C27sing1.38Å1.53ÅAromatic
C28N35trip1.14Å1.13Å
C29O40sing1.43Å1.40Å
N32C09sing1.35Å1.45Å
N32C10sing1.47Å1.47Å
C01C02doub1.40Å1.57ÅAromatic
C01N30sing1.33Å1.46ÅAromatic
C02C03sing1.40Å1.37ÅAromatic
C02N31sing1.38Å1.38ÅAromatic
C03C04doub1.40Å1.55ÅAromatic
C03C07sing1.47Å1.38ÅAromatic
C04C05sing1.39Å1.51ÅAromatic
C04O40sing1.36Å1.39Å
C05N30doub1.32Å1.45ÅAromatic
C06C07doub1.38Å1.38ÅAromatic
C06N31sing1.34Å1.36ÅAromatic
C07C08sing1.46Å1.53Å
C08C09sing1.49Å1.53Å
C08O36doub1.21Å1.19Å
C09O37doub1.21Å1.18Å
C10C11sing1.53Å1.53Å
C16S41sing1.71Å1.51ÅAromatic
C23C24sing1.38Å1.52ÅAromatic
C24C25doub1.38Å1.53ÅAromatic
C25C26sing1.38Å1.53ÅAromatic
C26C27doub1.38Å1.52ÅAromatic
C12H1sing1.09Å1.10Å
C13H2sing1.09Å1.10Å
C13H3sing1.09Å1.10Å
C14H4sing1.09Å1.10Å
C14H5sing1.09Å1.10Å
C19H7sing1.09Å1.10Å
C19H8sing1.09Å1.10Å
C20H9sing1.09Å1.10Å
C20H10sing1.09Å1.10Å
C21H11sing1.09Å1.10Å
C29H12sing1.09Å1.10Å
C29H13sing1.09Å1.10Å
C29H14sing1.09Å1.10Å
C05H15sing1.08Å1.08Å
C06H16sing1.08Å1.08Å
C10H17sing1.09Å1.10Å
C10H18sing1.09Å1.10Å
C11H19sing1.09Å1.10Å
C11H20sing1.09Å1.10Å
C16H21sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C24H24sing1.08Å1.08Å
C25H25sing1.08Å1.08Å
C26H26sing1.08Å1.08Å
C27H27sing1.08Å1.08Å
N31H28sing0.97Å1.00Å
N34H29sing0.97Å1.00Å
O38H30sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C13C12C21121.8°109.5°
C13C12C11114.0°109.5°
C12C13C14113.2°109.4°
C13C12H193.3°109.4°
C12C13H2108.5°109.5°
C12C13H3108.5°109.5°
C21C12C11123.1°109.4°
C12C21C22120.7°109.5°
C12C21C28118.1°109.5°
C21C12H193.8°109.5°
C12C21H1194.7°109.5°
C12C11C10119.9°109.3°
C11C12H193.3°109.4°
C12C11H19106.8°109.5°
C12C11H20106.8°109.5°
C13C14N32110.3°108.8°
C14C13H2108.5°109.5°
C14C13H3108.5°109.5°
C13C14H4109.2°109.6°
C13C14H5109.2°109.6°
C14N32C09125.0°120.6°
C14N32C10112.5°118.8°
N32C14H4109.3°109.5°
N32C14H5109.3°109.6°
C01C15C16127.7°122.5°
C01C15N33123.6°122.4°
C15C01C02117.2°119.9°
C15C01N30121.8°119.7°
C16C15N33108.6°115.1°
C15C16S41107.2°108.9°
C15C16H21126.4°125.5°
C15N33C17108.4°116.0°
C18C17N33124.1°125.3°
C18C17S41128.2°125.3°
C17C18N34118.1°120.0°
C17C18O39121.0°120.0°
N33C17S41107.7°109.4°
C17S41C16108.0°90.5°
N34C18O39120.9°120.0°
C18N34C19121.4°120.0°
C18N34H29119.3°120.1°
C20C19N34108.4°109.5°
C19C20O38109.5°109.5°
C20C19H7109.8°109.5°
C20C19H8109.7°109.5°
C19C20H9109.4°109.5°
C19C20H10109.5°109.5°
N34C19H7109.7°109.4°
N34C19H8109.8°109.4°
C19N34H29119.3°120.0°
O38C20H9109.4°109.5°
O38C20H10109.4°109.5°
C20O38H30109.5°114.0°
C22C21C28119.6°109.5°
C21C22C23120.4°120.0°
C21C22C27119.6°120.0°
C22C21H1194.1°109.4°
C21C28N35179.6°180.0°
C28C21H1194.1°109.5°
C23C22C27120.0°120.0°
C22C23C24119.9°120.0°
C22C23H23120.0°120.0°
C22C27C26120.1°120.1°
C22C27H27119.9°120.0°
C29O40C04113.2°117.0°
O40C29H12109.5°109.4°
O40C29H13109.4°109.5°
O40C29H14109.5°109.5°
C09N32C10122.5°120.7°
N32C09C08121.2°120.0°
N32C09O37118.8°120.0°
N32C10C11117.2°108.8°
N32C10H17107.5°109.6°
N32C10H18107.5°109.6°
C02C01N30121.0°120.4°
C01C02C03121.1°118.5°
C01C02N31130.0°133.9°
C01N30C05118.7°122.4°
C03C02N31108.9°107.6°
C02C03C04118.2°118.9°
C02C03C07106.9°106.0°
C02N31C06107.8°110.8°
C02N31H28126.1°124.6°
C04C03C07134.9°135.1°
C03C04C05120.7°118.7°
C03C04O40121.6°120.6°
C03C07C06108.0°106.0°
C03C07C08130.1°127.0°
C05C04O40117.7°120.6°
C04C05N30120.3°121.1°
C04C05H15119.8°119.4°
N30C05H15119.8°119.5°
C07C06N31108.4°109.5°
C06C07C08121.9°126.9°
C07C06H16125.8°125.2°
N31C06H16125.8°125.3°
C06N31H28126.1°124.6°
C07C08C09122.1°120.0°
C07C08O36117.7°120.0°
C09C08O36120.2°120.0°
C08C09O37120.0°120.0°
C11C10H17107.5°109.6°
C11C10H18107.5°109.6°
C10C11H19106.8°109.5°
C10C11H20106.8°109.4°
S41C16H21126.4°125.6°
C23C24C25120.0°120.0°
C24C23H23120.1°120.0°
C23C24H24120.0°120.0°
C24C25C26120.2°120.0°
C25C24H24120.0°119.9°
C24C25H25119.9°120.0°
C25C26C27119.8°120.0°
C26C25H25119.9°120.0°
C25C26H26120.2°120.0°
C27C26H26120.1°120.0°
C26C27H27119.9°119.9°
H2C13H3109.5°109.5°
H4C14H5109.5°109.7°
H7C19H8109.5°109.4°
H9C20H10109.5°109.5°
H12C29H13109.5°109.5°
H12C29H14109.5°109.5°
H13C29H14109.5°109.5°
H17C10H18109.5°109.7°
H19C11H20109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C13C12C21C11167.2°120.1°
C13C12C21H196.3°120.0°
C13C12C11H195.1°120.0°
C12C13C14H2120.5°120.0°
C12C13C14H3120.5°120.0°
C12C13C14N3262.2°54.6°
C13C12C21C22157.0°180.0°
C13C12C21C2837.8°60.0°
C13C12C11C1014.7°61.4°
C12C13H2H3118.3°120.1°
C12C13C14H457.9°65.1°
C12C13C14H5177.7°174.4°
C13C12C21H1159.4°60.0°
C13C12C11H19136.2°58.6°
C13C12C11H20106.8°178.7°
C21C12C11H196.7°120.0°
C21C12C13C14167.8°178.6°
C12C21C22C28165.0°120.0°
C12C21C22H1197.9°120.0°
C12C21C28H1197.6°120.0°
C12C21C22C2364.9°120.0°
C12C21C22C27115.6°60.3°
C12C21C28N352.3°44.8°
C21C12C11C10153.5°178.6°
C21C12C13H247.2°58.6°
C21C12C13H371.7°61.4°
C21C12C11H1932.0°61.5°
C21C12C11H2085.1°58.7°
C11C12C13C1423.9°61.4°
C11C12C21C2210.2°59.9°
C11C12C21C28155.0°179.9°
C12C11C10N3217.6°54.6°
C12C11C10H19121.5°119.9°
C12C11C10H20121.5°119.9°
C11C12C13H2144.4°178.6°
C11C12C13H396.6°58.6°
C11C12C21H11107.8°60.1°
C12C11C10H17138.7°65.1°
C12C11C10H18103.5°174.4°
C12C11H19H20115.3°120.1°
C13C14N32H4120.1°119.8°
C13C14N32H5120.1°119.9°
C13C14N32C09121.9°126.4°
C13C14N32C1058.9°53.6°
C14C13C12H171.2°58.6°
C14C13H2H3118.3°120.0°
C13C14H4H5119.6°120.4°
C14N32C09C10179.1°179.9°
C14N32C09C080.8°169.3°
C14N32C09O37179.8°10.8°
C14N32C10C1119.8°53.6°
N32C14C13H2177.3°174.6°
N32C14C13H358.3°65.4°
N32C14H4H5119.6°120.3°
C14N32C10H17101.2°66.2°
C14N32C10H18140.9°173.4°
C01C15C16N33178.8°179.7°
C01C15N33C17179.0°180.0°
C15C01C02N30178.7°179.7°
C15C01C02C03179.3°180.0°
C15C01C02N311.0°0.0°
C15C01N30C05179.3°179.7°
C01C15C16S41179.2°180.0°
C01C15C16H210.8°0.0°
C16C15N33C170.2°0.3°
C15C16S41C170.4°0.1°
C16C15C01C02170.8°155.0°
C16C15C01N307.9°25.3°
C15C16S41H21180.0°180.0°
C15N33C17C18179.6°180.0°
C15N33C17S410.1°0.2°
N33C15C01C027.8°25.3°
N33C15C01N30173.4°154.4°
N33C15C16S410.4°0.3°
N33C15C16H21179.6°179.7°
C18C17N33S41179.5°179.8°
C17C18N34O39179.3°180.0°
C17C18N34C19180.0°180.0°
C18C17S41C16179.7°179.8°
C17C18N34H290.0°0.0°
N33C17C18N3427.9°179.9°
N33C17C18O39151.4°0.1°
N33C17S41C160.3°0.0°
S41C17C18N34151.4°0.2°
S41C17C18O3929.3°179.8°
C17S41C16H21179.6°179.9°
C18N34C19C20126.2°180.0°
C18N34C19H29180.0°180.0°
C18N34C19H76.4°59.9°
C18N34C19H8114.0°60.0°
O39C18N34C190.7°0.0°
O39C18N34H29179.3°180.0°
C20C19N34H7119.8°120.1°
C20C19N34H8119.8°120.0°
C19C20O38H9120.0°120.0°
C19C20O38H10120.0°120.0°
C20C19H7H8120.5°120.0°
C19C20H9H10120.0°120.0°
C20C19N34H2953.8°0.0°
C19C20O38H30180.0°180.0°
N34C19C20O3814.1°65.0°
N34C19H7H8120.5°119.9°
N34C19C20H9134.1°175.0°
N34C19C20H10105.9°55.0°
O38C20C19H7133.9°175.0°
O38C20C19H8105.8°55.0°
O38C20H9H10120.0°120.0°
C22C21C28H1197.0°120.0°
C21C22C23C27179.4°179.7°
C22C21C28N35167.8°75.3°
C21C22C23C24179.9°180.0°
C21C22C27C26179.9°179.8°
C22C21C12H1106.7°60.0°
C21C22C23H230.1°0.1°
C21C22C27H270.1°0.1°
C28C21C22C23130.0°119.9°
C28C21C22C2749.4°59.7°
C28C21C12H158.5°60.0°
C22C23C24H23180.0°179.9°
C22C23C24C250.5°0.0°
C23C22C27C260.4°0.5°
C23C22C21H1133.0°0.0°
C22C23C24H24179.5°179.9°
C23C22C27H27179.6°179.7°
C27C22C23C240.6°0.3°
C22C27C26C250.1°0.4°
C22C27C26H27180.0°179.7°
C27C22C21H11146.4°179.7°
C27C22C23H23179.3°179.7°
C22C27C26H26179.9°179.7°
N35C28C21H1195.2°164.8°
C29O40C04C03109.3°180.0°
C29O40C04C0570.5°0.1°
O40C29H12H13120.0°120.0°
O40C29H12H14120.0°120.0°
O40C29H13H14120.0°120.0°
N32C09C08C07131.5°114.3°
N32C09C08O37179.3°180.0°
N32C09C08O3649.2°65.7°
C09N32C10C11160.9°126.3°
C09N32C14H4118.0°113.9°
C09N32C14H51.8°6.5°
C09N32C10H1778.0°113.9°
C09N32C10H1839.8°6.6°
C10N32C09C08180.0°10.7°
C10N32C09O370.7°169.3°
N32C10C11H17121.1°119.8°
N32C10C11H18121.1°119.8°
C10N32C14H461.2°66.2°
C10N32C14H5179.0°173.4°
N32C10H17H18116.5°120.4°
N32C10C11H19139.1°65.3°
N32C10C11H20103.8°174.6°
C01C02C03N31179.7°180.0°
C01C02C03C040.2°0.0°
C01C02C03C07179.6°180.0°
C02C01N30C050.6°0.7°
C01C02N31C06179.6°180.0°
C01C02N31H280.4°0.0°
N30C01C02C030.6°0.3°
N30C01C02N31179.8°179.7°
C01N30C05C040.4°0.7°
C01N30C05H15179.6°179.7°
C02C03C04C07179.8°180.0°
C02C03C04C050.0°0.0°
C02C03C04O40179.9°180.0°
C02C03C07C060.1°0.0°
C03C02N31C060.1°0.0°
C02C03C07C08179.7°180.0°
C03C02N31H28179.9°180.0°
N31C02C03C04179.9°180.0°
N31C02C03C070.1°0.0°
C02N31C06C070.0°0.0°
C02N31C06H28180.0°180.0°
C02N31C06H16180.0°180.0°
C03C04C05O40179.8°179.9°
C03C04C05N300.0°0.4°
C04C03C07C06179.9°180.0°
C04C03C07C080.6°0.0°
C03C04C05H15180.0°180.0°
C07C03C04C05179.8°180.0°
C07C03C04O400.4°0.1°
C03C07C06C08179.6°180.0°
C03C07C06N310.1°0.0°
C03C07C08C0926.2°180.0°
C03C07C08O36154.4°0.0°
C03C07C06H16179.9°180.0°
C04C05N30H15180.0°179.7°
O40C04C05N30179.8°179.7°
C04O40C29H12180.0°180.0°
C04O40C29H1360.0°60.0°
C04O40C29H1460.0°60.1°
O40C04C05H150.2°0.1°
C07C06N31H16180.0°180.0°
C06C07C08C09154.3°0.0°
C06C07C08O3625.1°180.0°
C07C06N31H28180.0°180.0°
N31C06C07C08179.7°180.0°
C07C08C09O36179.4°180.0°
C07C08C09O3747.9°65.7°
C08C07C06H160.3°0.1°
O36C08C09O37131.5°114.3°
C10C11C12H1109.8°58.6°
C11C10H17H18116.5°120.4°
C10C11H19H20115.3°120.0°
C23C24C25H24180.0°180.0°
C23C24C25C260.2°0.1°
C23C24C25H25179.8°180.0°
C24C25C26H25180.0°180.0°
C24C25C26C270.0°0.1°
C25C24C23H23179.5°180.0°
C24C25C26H26180.0°180.0°
C25C26C27H26180.0°179.9°
C26C25C24H24179.8°180.0°
C25C26C27H27179.9°179.8°
C27C26C25H25180.0°179.9°
H1C12C13H249.3°61.4°
H1C12C13H3168.2°178.6°
H1C12C21H11155.7°180.0°
H1C12C11H19128.7°178.6°
H1C12C11H2011.6°61.3°
H2C13C14H462.6°54.8°
H2C13C14H557.1°65.6°
H3C13C14H4178.5°174.9°
H3C13C14H561.8°54.4°
H7C19C20H9106.1°55.0°
H7C19C20H1013.9°65.0°
H7C19N34H29173.6°120.1°
H8C19C20H914.2°65.0°
H8C19C20H10134.2°175.0°
H8C19N34H2966.1°120.0°
H9C20O38H3060.0°60.0°
H10C20O38H3060.0°60.0°
H12C29H13H14120.0°120.0°
H16C06N31H280.0°0.1°
H17C10C11H1999.8°174.9°
H17C10C11H2017.3°54.8°
H18C10C11H1918.0°54.5°
H18C10C11H20135.1°65.6°
H23C23C24H240.5°0.0°
H24C24C25H250.2°0.0°
H25C25C26H260.0°0.1°
H26C26C27H270.1°0.1°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon