Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

JYO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C28C29doub1.38Å1.40ÅAromatic
C28C27sing1.38Å1.39ÅAromatic
N13C12sing1.47Å1.45Å
C29C30sing1.38Å1.39ÅAromatic
C27C26doub1.38Å1.40ÅAromatic
C12C11sing1.53Å1.51Å
C30C25doub1.40Å1.41ÅAromatic
C26C25sing1.40Å1.39ÅAromatic
C25C1sing1.48Å1.49Å
C11C6sing1.53Å1.53Å
F22C21sing1.40Å1.31Å
C6C7sing1.53Å1.53Å
C6N5sing1.47Å1.50Å
F24C21sing1.40Å1.30Å
C7N8sing1.46Å1.47Å
C21F23sing1.40Å1.31Å
C21O20sing1.43Å1.41Å
C1N5sing1.35Å1.35ÅAromatic
C1C3doub1.39Å1.49ÅAromatic
N5C4sing1.39Å1.33ÅAromatic
O20C18sing1.36Å1.34Å
N8C9doub1.31Å1.27Å
C19C18doub1.38Å1.39ÅAromatic
C19C10sing1.39Å1.39ÅAromatic
C4C9sing1.47Å1.47Å
C4C2doub1.35Å1.37ÅAromatic
C3C10sing1.48Å1.49Å
C3C2sing1.41Å1.38ÅAromatic
C18C17sing1.39Å1.38ÅAromatic
C9O14sing1.35Å1.33Å
C10C15doub1.39Å1.39ÅAromatic
C17C16doub1.38Å1.38ÅAromatic
C15C16sing1.38Å1.40ÅAromatic
C6H6sing1.09Å1.10Å
C7H72sing1.09Å1.10Å
C7H71sing1.09Å1.10Å
C15H15sing1.08Å1.08Å
C17H17sing1.08Å1.08Å
C26H26sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C11H112sing1.09Å1.10Å
C11H111sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C12H121sing1.09Å1.10Å
C16H16sing1.08Å1.08Å
C19H19sing1.08Å1.08Å
O14HO14sing0.97Å0.95Å
N13HN12sing1.01Å1.00Å
N13HN11sing1.01Å1.00Å
C27H27sing1.08Å1.08Å
C28H28sing1.08Å1.08Å
C29H29sing1.08Å1.08Å
C30H30sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C29C28C27119.4°120.3°
C28C29C30120.1°120.2°
C29C28H28120.3°119.8°
C28C29H29119.9°119.9°
C28C27C26120.7°120.2°
C28C27H27119.7°119.9°
C27C28H28120.3°119.9°
N13C12C11110.5°109.5°
N13C12H122109.2°109.5°
N13C12H121109.2°109.4°
C12N13HN12109.5°111.0°
C12N13HN11109.5°111.0°
C29C30C25120.3°119.8°
C30C29H29120.0°119.9°
C29C30H30119.8°120.1°
C27C26C25119.9°119.8°
C27C26H26120.0°120.1°
C26C27H27119.6°119.9°
C12C11C6114.0°109.4°
C12C11H112108.3°109.5°
C12C11H111108.3°109.5°
C11C12H122109.2°109.5°
C11C12H121109.2°109.5°
C30C25C26119.5°119.7°
C30C25C1119.4°120.1°
C25C30H30119.8°120.2°
C26C25C1121.1°120.2°
C25C26H26120.0°120.1°
C25C1N5127.2°126.1°
C25C1C3125.6°126.1°
C11C6C7103.9°109.6°
C11C6N5111.6°109.9°
C11C6H6110.1°109.7°
C6C11H112108.3°109.5°
C6C11H111108.3°109.4°
F22C21F24110.0°109.5°
F22C21F23110.7°109.5°
F22C21O20110.4°109.4°
C7C6N5110.4°108.6°
C6C7N8108.2°112.8°
C7C6H6110.1°109.5°
C6C7H72109.8°108.8°
C6C7H71109.8°108.7°
C6N5C1131.5°130.4°
C6N5C4120.2°120.9°
N5C6H6110.6°109.3°
F24C21F23108.3°109.5°
F24C21O20106.6°109.5°
C7N8C9126.8°123.1°
N8C7H72109.8°109.1°
N8C7H71109.8°108.6°
F23C21O20110.7°109.5°
C21O20C18122.6°117.0°
N5C1C3107.2°107.9°
C1N5C4108.3°108.7°
C1C3C10130.0°126.4°
C1C3C2104.7°107.2°
N5C4C9120.8°120.3°
N5C4C2112.2°108.8°
O20C18C19120.8°120.0°
O20C18C17117.1°120.0°
N8C9C4116.5°116.8°
N8C9O14122.4°121.6°
C18C19C10119.5°119.8°
C19C18C17122.1°120.0°
C18C19H19120.2°120.1°
C19C10C3123.2°120.1°
C19C10C15118.4°119.8°
C10C19H19120.3°120.1°
C9C4C2127.0°130.9°
C4C9O14121.2°121.6°
C4C2C3107.5°107.4°
C4C2H2126.2°126.3°
C10C3C2125.3°126.4°
C3C10C15118.4°120.1°
C3C2H2126.3°126.3°
C18C17C16118.7°120.2°
C18C17H17120.7°119.9°
C9O14HO14109.5°114.0°
C10C15C16121.2°120.0°
C10C15H15119.4°120.0°
C17C16C15120.2°120.2°
C16C17H17120.6°119.9°
C17C16H16119.9°119.9°
C16C15H15119.4°120.0°
C15C16H16119.9°119.9°
H72C7H71109.5°108.7°
H112C11H111109.5°109.5°
H122C12H121109.5°109.5°
HN12N13HN11109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C29C28C27H28180.0°179.8°
C28C29C30H29180.0°179.8°
C29C28C27C261.3°0.1°
C28C29C30C252.0°0.5°
C29C28C27H27178.7°180.0°
C28C29C30H30178.0°180.0°
C27C28C29C300.0°0.2°
C28C27C26H27180.0°179.8°
C28C27C26C250.7°0.1°
C28C27C26H26179.3°179.7°
C27C28C29H29180.0°180.0°
N13C12C11H122120.2°120.0°
N13C12C11H121120.2°120.0°
N13C12C11C695.7°180.0°
N13C12C11H11225.0°60.0°
N13C12C11H111143.6°60.1°
N13C12H122H121119.5°120.0°
C12N13HN12HN11120.0°123.9°
C29C30C25H30180.0°179.5°
C29C30C25C262.7°0.5°
C29C30C25C1179.1°179.4°
C30C29C28H28180.0°180.0°
C27C26C25C301.3°0.2°
C27C26C25H26180.0°179.8°
C27C26C25C1179.5°179.8°
C26C27C28H28178.6°179.6°
C12C11C6H112120.7°120.1°
C12C11C6H111120.7°120.0°
C12C11C6C7157.2°66.1°
C12C11C6N583.9°174.5°
C12C11C6H639.3°54.3°
C12C11H112H111117.9°120.0°
C11C12H122H121119.5°120.0°
C11C12N13HN12180.0°56.1°
C11C12N13HN1160.0°180.0°
C30C25C26C1178.1°180.0°
C30C25C1N565.3°124.7°
C30C25C1C3114.3°55.3°
C30C25C26H26178.7°180.0°
C25C30C29H29178.0°179.7°
C26C25C1N5116.5°55.3°
C26C25C1C363.8°124.7°
C25C26C27H27179.3°179.9°
C26C25C30H30177.3°180.0°
C25C1N5C60.9°0.1°
C25C1N5C3179.7°180.0°
C25C1N5C4179.8°179.7°
C25C1C3C102.2°0.1°
C25C1C3C2179.9°179.8°
C1C25C26H260.5°0.1°
C1C25C30H300.9°0.0°
C11C6C7N5119.8°120.2°
C11C6C7H6117.9°120.4°
C11C6N5H6122.9°120.5°
C11C6C7N874.5°73.6°
C11C6N5C196.7°91.0°
C11C6N5C482.6°89.5°
C11C6C7H72165.7°165.2°
C11C6C7H7145.3°47.0°
C6C11H112H111117.9°119.9°
C6C11C12H122144.2°60.0°
C6C11C12H12124.5°60.0°
F22C21F24F23121.1°120.0°
F22C21F24O20119.7°120.0°
F22C21F23O20122.8°120.0°
F22C21O20C1854.1°60.1°
C7C6N5H6122.1°119.5°
C6C7N8H72119.8°121.1°
C6C7N8H71119.8°120.6°
C7C6N5C1148.3°149.0°
C7C6N5C432.4°30.5°
C6C7N8C934.8°35.7°
C6C7H72H71120.6°118.3°
C7C6C11H11236.5°173.9°
C7C6C11H11182.1°53.9°
N5C6C7N845.3°46.6°
C6N5C1C4179.3°179.6°
C6N5C1C3179.4°179.9°
C6N5C4C91.2°0.3°
C6N5C4C2179.1°179.9°
N5C6C7H7274.5°74.6°
N5C6C7H71165.1°167.1°
N5C6C11H112155.5°54.5°
N5C6C11H11136.8°65.5°
F24C21F23O20116.5°120.0°
F24C21O20C18173.6°60.0°
C7N8C9C44.0°3.1°
C7N8C9O14175.8°176.8°
N8C7C6H6167.7°166.0°
N8C7H72H71120.6°118.2°
F23C21O20C1868.8°180.0°
C21O20C18C1978.9°179.3°
C21O20C18C17102.0°0.1°
C1N5C4C9179.4°179.9°
C1N5C4C20.3°0.3°
N5C1C3C10178.1°180.0°
N5C1C3C20.4°0.2°
C1N5C6H626.2°29.5°
C3C1N5C40.1°0.3°
C1C3C10C1925.2°130.3°
C1C3C2C40.6°0.0°
C1C3C10C2177.3°179.7°
C1C3C10C15153.8°50.0°
C1C3C2H2179.5°179.9°
N5C4C9N815.2°16.4°
N5C4C9C2179.7°179.7°
N5C4C2C30.6°0.2°
N5C4C9O14165.0°163.6°
C4N5C6H6154.5°150.0°
N5C4C2H2179.5°179.9°
O20C18C19C17179.1°179.4°
O20C18C19C10179.5°179.8°
O20C18C17C16179.7°180.0°
O20C18C17H170.3°0.4°
O20C18C19H190.5°0.7°
N8C9C4O14179.8°179.9°
N8C9C4C2164.5°163.9°
C9N8C7H7285.0°85.4°
C9N8C7H71154.6°156.3°
N8C9O14HO140.0°0.1°
C18C19C10H19180.0°179.6°
C18C19C10C3179.4°179.7°
C18C19C10C150.4°0.1°
C19C18C17C161.2°0.6°
C19C18C17H17178.8°179.8°
C19C10C3C15179.0°179.7°
C19C10C3C2157.5°49.4°
C10C19C18C170.4°0.4°
C19C10C15C160.6°0.3°
C19C10C15H15179.4°179.7°
C9C4C2C3179.1°179.9°
C9C4C2H20.9°0.2°
C4C9O14HO14179.8°180.0°
C4C2C3C10178.4°179.8°
C4C2C3H2180.0°179.9°
C2C4C9O1415.3°16.0°
C3C10C15C16179.6°179.9°
C3C10C15H150.4°0.1°
C10C3C2H21.6°0.1°
C3C10C19H190.6°0.1°
C2C3C10C1523.5°130.3°
C18C17C16H17180.0°179.6°
C18C17C16C151.0°0.4°
C18C17C16H16179.0°179.6°
C17C18C19H19179.6°180.0°
C10C15C16C170.1°0.0°
C10C15C16H15180.0°180.0°
C10C15C16H16179.9°180.0°
C15C10C19H19179.6°179.5°
C17C16C15H16180.0°180.0°
C17C16C15H15179.9°179.9°
C15C16C17H17179.0°180.0°
H6C6C7H7247.9°44.8°
H6C6C7H7172.5°73.5°
H6C6C11H11281.4°65.8°
H6C6C11H111160.0°174.2°
H15C15C16H160.1°0.0°
H17C17C16H161.0°0.0°
H26C26C27H270.7°0.1°
H112C11C12H12295.2°180.0°
H112C11C12H121145.1°60.0°
H111C11C12H12223.5°59.9°
H111C11C12H12196.2°180.0°
H122C12N13HN1259.8°63.9°
H122C12N13HN1160.1°60.0°
H121C12N13HN1259.9°176.1°
H121C12N13HN11179.8°60.0°
H27C27C28H281.4°0.2°
H28C28C29H290.0°0.2°
H29C29C30H302.0°0.2°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon